Incidental Mutation 'IGL02000:Sidt1'
ID 183018
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Sidt1
Ensembl Gene ENSMUSG00000022696
Gene Name SID1 transmembrane family, member 1
Synonyms B830021E24Rik
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # IGL02000
Quality Score
Status
Chromosome 16
Chromosomal Location 44060543-44153559 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 44106732 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Phenylalanine to Isoleucine at position 233 (F233I)
Ref Sequence ENSEMBL: ENSMUSP00000038433 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000047446] [ENSMUST00000136381]
AlphaFold Q6AXF6
Predicted Effect probably damaging
Transcript: ENSMUST00000047446
AA Change: F233I

PolyPhen 2 Score 0.975 (Sensitivity: 0.76; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000038433
Gene: ENSMUSG00000022696
AA Change: F233I

DomainStartEndE-ValueType
signal peptide 1 19 N/A INTRINSIC
low complexity region 36 50 N/A INTRINSIC
Pfam:SID-1_RNA_chan 184 832 1.8e-290 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000124651
Predicted Effect noncoding transcript
Transcript: ENSMUST00000127124
Predicted Effect possibly damaging
Transcript: ENSMUST00000136381
AA Change: F233I

PolyPhen 2 Score 0.956 (Sensitivity: 0.79; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000115372
Gene: ENSMUSG00000022696
AA Change: F233I

DomainStartEndE-ValueType
signal peptide 1 19 N/A INTRINSIC
low complexity region 36 50 N/A INTRINSIC
Pfam:SID-1_RNA_chan 184 827 1.3e-251 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000147032
SMART Domains Protein: ENSMUSP00000114424
Gene: ENSMUSG00000022696

DomainStartEndE-ValueType
transmembrane domain 24 46 N/A INTRINSIC
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 42 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Arid5a T C 1: 36,358,578 (GRCm39) F450S probably damaging Het
Astn1 C T 1: 158,502,184 (GRCm39) R1133C probably damaging Het
Cd101 G A 3: 100,919,398 (GRCm39) P568L probably benign Het
Cdkl4 T C 17: 80,851,192 (GRCm39) E170G probably damaging Het
Chit1 A G 1: 134,074,413 (GRCm39) E240G probably benign Het
Duox2 T C 2: 122,121,190 (GRCm39) T741A probably benign Het
Eef2 T C 10: 81,015,845 (GRCm39) V427A probably benign Het
Ewsr1 T C 11: 5,038,077 (GRCm39) D105G probably damaging Het
Ftsj3 C T 11: 106,141,233 (GRCm39) R629Q probably benign Het
Gm10406 C T 14: 18,341,703 (GRCm39) G181E probably benign Het
Ilk A G 7: 105,390,376 (GRCm39) H185R probably benign Het
Lamc1 A T 1: 153,116,179 (GRCm39) C1001S probably damaging Het
Mcidas T C 13: 113,133,974 (GRCm39) S153P probably benign Het
Mtcl1 T C 17: 66,661,185 (GRCm39) E931G probably benign Het
Myo10 C T 15: 25,808,152 (GRCm39) R1925C probably damaging Het
Notch3 A G 17: 32,341,716 (GRCm39) V2012A probably damaging Het
Or6c76 C A 10: 129,611,938 (GRCm39) H67N probably benign Het
Parp6 A G 9: 59,556,175 (GRCm39) M542V probably benign Het
Rab27a G A 9: 72,992,254 (GRCm39) G94D probably damaging Het
Ralgapb A G 2: 158,296,034 (GRCm39) probably benign Het
Rassf4 T C 6: 116,622,933 (GRCm39) E26G probably benign Het
Rnf166 C T 8: 123,193,961 (GRCm39) D221N probably damaging Het
Rptn G T 3: 93,303,735 (GRCm39) G356V probably benign Het
Rwdd2b T A 16: 87,233,828 (GRCm39) probably benign Het
Scfd1 T A 12: 51,460,900 (GRCm39) S337T probably benign Het
Sel1l3 T A 5: 53,302,835 (GRCm39) D678V probably damaging Het
Slc12a4 T C 8: 106,671,864 (GRCm39) D917G probably damaging Het
Slc22a2 A T 17: 12,803,270 (GRCm39) I35F possibly damaging Het
Smco1 A T 16: 32,092,751 (GRCm39) T141S possibly damaging Het
Svs6 T C 2: 164,159,352 (GRCm39) probably benign Het
Syne2 C T 12: 76,062,419 (GRCm39) A4247V probably damaging Het
Tacc2 T A 7: 130,330,898 (GRCm39) probably null Het
Tgm4 A T 9: 122,885,531 (GRCm39) I358F probably damaging Het
Thnsl2 A G 6: 71,111,203 (GRCm39) S222P probably damaging Het
Tmem25 G A 9: 44,709,568 (GRCm39) R78* probably null Het
Ube2l6 T C 2: 84,639,506 (GRCm39) probably benign Het
Usp10 T A 8: 120,675,480 (GRCm39) Y63N possibly damaging Het
Vit A G 17: 78,912,915 (GRCm39) I283V possibly damaging Het
Vmn1r214 G A 13: 23,219,270 (GRCm39) V255I possibly damaging Het
Xpo1 A G 11: 23,246,003 (GRCm39) R1038G probably damaging Het
Ybx1 T A 4: 119,139,509 (GRCm39) N50I probably damaging Het
Zhx1 T C 15: 57,917,683 (GRCm39) K188E probably damaging Het
Other mutations in Sidt1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00709:Sidt1 APN 16 44,082,374 (GRCm39) splice site probably benign
IGL01103:Sidt1 APN 16 44,063,906 (GRCm39) nonsense probably null
IGL01725:Sidt1 APN 16 44,104,645 (GRCm39) missense probably benign 0.06
IGL02266:Sidt1 APN 16 44,075,348 (GRCm39) missense possibly damaging 0.90
IGL02309:Sidt1 APN 16 44,075,343 (GRCm39) missense probably benign 0.00
IGL02898:Sidt1 APN 16 44,102,858 (GRCm39) missense possibly damaging 0.87
R0282:Sidt1 UTSW 16 44,102,249 (GRCm39) missense possibly damaging 0.79
R0525:Sidt1 UTSW 16 44,079,809 (GRCm39) missense possibly damaging 0.64
R0927:Sidt1 UTSW 16 44,063,895 (GRCm39) missense probably benign 0.00
R1806:Sidt1 UTSW 16 44,102,234 (GRCm39) missense possibly damaging 0.46
R1911:Sidt1 UTSW 16 44,102,234 (GRCm39) missense possibly damaging 0.81
R3843:Sidt1 UTSW 16 44,104,587 (GRCm39) missense probably benign 0.04
R3848:Sidt1 UTSW 16 44,076,322 (GRCm39) intron probably benign
R4023:Sidt1 UTSW 16 44,102,249 (GRCm39) missense possibly damaging 0.79
R4026:Sidt1 UTSW 16 44,102,249 (GRCm39) missense possibly damaging 0.79
R4495:Sidt1 UTSW 16 44,102,841 (GRCm39) missense probably damaging 1.00
R4603:Sidt1 UTSW 16 44,075,389 (GRCm39) missense probably damaging 0.98
R4707:Sidt1 UTSW 16 44,090,221 (GRCm39) nonsense probably null
R5322:Sidt1 UTSW 16 44,101,985 (GRCm39) intron probably benign
R5921:Sidt1 UTSW 16 44,094,098 (GRCm39) splice site probably benign
R5980:Sidt1 UTSW 16 44,083,675 (GRCm39) nonsense probably null
R5982:Sidt1 UTSW 16 44,082,071 (GRCm39) missense probably damaging 1.00
R6063:Sidt1 UTSW 16 44,079,829 (GRCm39) missense probably benign 0.01
R6337:Sidt1 UTSW 16 44,121,298 (GRCm39) splice site probably null
R6392:Sidt1 UTSW 16 44,111,657 (GRCm39) missense possibly damaging 0.47
R6855:Sidt1 UTSW 16 44,065,706 (GRCm39) missense probably null 1.00
R7092:Sidt1 UTSW 16 44,120,192 (GRCm39) missense possibly damaging 0.89
R7099:Sidt1 UTSW 16 44,063,860 (GRCm39) missense probably damaging 1.00
R7448:Sidt1 UTSW 16 44,106,763 (GRCm39) nonsense probably null
R7574:Sidt1 UTSW 16 44,079,848 (GRCm39) missense probably damaging 1.00
R8265:Sidt1 UTSW 16 44,088,250 (GRCm39) missense possibly damaging 0.79
R8379:Sidt1 UTSW 16 44,106,755 (GRCm39) missense probably benign 0.14
R8460:Sidt1 UTSW 16 44,107,705 (GRCm39) nonsense probably null
R8480:Sidt1 UTSW 16 44,065,529 (GRCm39) missense probably damaging 1.00
R8762:Sidt1 UTSW 16 44,152,707 (GRCm39) missense probably benign 0.16
R8954:Sidt1 UTSW 16 44,082,390 (GRCm39) missense probably benign 0.04
R8974:Sidt1 UTSW 16 44,101,980 (GRCm39) makesense probably null
R9362:Sidt1 UTSW 16 44,078,316 (GRCm39) missense possibly damaging 0.96
R9451:Sidt1 UTSW 16 44,075,392 (GRCm39) critical splice acceptor site probably null
R9669:Sidt1 UTSW 16 44,102,243 (GRCm39) missense probably damaging 1.00
R9737:Sidt1 UTSW 16 44,102,243 (GRCm39) missense probably damaging 1.00
Z1176:Sidt1 UTSW 16 44,079,845 (GRCm39) missense possibly damaging 0.90
Z1191:Sidt1 UTSW 16 44,078,294 (GRCm39) critical splice donor site probably null
Posted On 2014-05-07