Incidental Mutation 'IGL02010:Xkr6'
ID183322
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Xkr6
Ensembl Gene ENSMUSG00000035067
Gene NameX-linked Kx blood group related 6
Synonyms
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.106) question?
Stock #IGL02010
Quality Score
Status
Chromosome14
Chromosomal Location63606503-63820809 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) C to T at 63819204 bp
ZygosityHeterozygous
Amino Acid Change Threonine to Methionine at position 188 (T188M)
Ref Sequence ENSEMBL: ENSMUSP00000112691 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000119973] [ENSMUST00000120820]
Predicted Effect probably benign
Transcript: ENSMUST00000119973
AA Change: T444M

PolyPhen 2 Score 0.387 (Sensitivity: 0.90; Specificity: 0.89)
SMART Domains Protein: ENSMUSP00000113708
Gene: ENSMUSG00000035067
AA Change: T444M

DomainStartEndE-ValueType
low complexity region 25 51 N/A INTRINSIC
Pfam:XK-related 127 498 1.1e-125 PFAM
low complexity region 627 638 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000120820
AA Change: T188M

PolyPhen 2 Score 0.387 (Sensitivity: 0.90; Specificity: 0.89)
SMART Domains Protein: ENSMUSP00000112691
Gene: ENSMUSG00000035067
AA Change: T188M

DomainStartEndE-ValueType
Pfam:XK-related 1 242 4.9e-105 PFAM
low complexity region 371 382 N/A INTRINSIC
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 56 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930452B06Rik A T 14: 8,578,384 H119Q possibly damaging Het
Abca6 T C 11: 110,219,616 D569G probably benign Het
Abhd17b C T 19: 21,684,121 T224I probably benign Het
Atf6b T A 17: 34,654,652 S695R probably benign Het
BC027072 T A 17: 71,749,464 T1073S probably benign Het
Cdh6 A C 15: 13,034,190 probably benign Het
Cep290 T C 10: 100,561,345 S2156P probably benign Het
Cep290 G T 10: 100,508,707 C462F probably benign Het
Cit T C 5: 115,875,947 F240L probably damaging Het
Col1a2 T A 6: 4,512,416 probably null Het
Ctcf T A 8: 105,664,965 H297Q probably damaging Het
Dhx29 T C 13: 112,966,634 probably null Het
Dhx37 T G 5: 125,418,713 T835P possibly damaging Het
Enc1 C T 13: 97,245,080 L33F possibly damaging Het
Epyc T A 10: 97,649,701 M1K probably null Het
F10 T C 8: 13,048,292 I165T probably damaging Het
Fam124a T C 14: 62,587,279 L74P probably damaging Het
Fam234b A G 6: 135,209,407 S138G probably benign Het
Fam81a T C 9: 70,099,137 K198E probably benign Het
Fbn2 T C 18: 58,037,722 Y2199C probably damaging Het
Fign A C 2: 63,980,400 S175R probably damaging Het
Grik1 T C 16: 88,051,508 N124S possibly damaging Het
Hdac9 G T 12: 34,431,945 L175M probably damaging Het
Hephl1 A C 9: 15,090,556 Y163* probably null Het
Hes1 G A 16: 30,067,310 G244D probably damaging Het
Hexb A G 13: 97,176,845 L501P probably benign Het
Igkv5-45 T C 6: 69,775,952 I49V probably benign Het
Ipo5 T C 14: 120,933,377 S491P probably benign Het
Jakmip2 C T 18: 43,559,093 probably null Het
Lrfn5 A G 12: 61,839,683 T86A probably damaging Het
Lrp1b T C 2: 41,468,942 T640A probably damaging Het
M6pr G T 6: 122,315,126 R139L possibly damaging Het
Myl9 A T 2: 156,778,659 N39Y probably damaging Het
Nlrp3 A G 11: 59,549,535 D646G probably benign Het
Nlrp5 A T 7: 23,417,372 M174L probably benign Het
Nnmt T A 9: 48,592,031 I232F probably damaging Het
Nrg1 T C 8: 31,918,143 T21A probably benign Het
Olfr1095 C T 2: 86,851,197 C167Y possibly damaging Het
Olfr808 A G 10: 129,768,267 Y257C probably benign Het
Pcdh7 T G 5: 58,129,255 N1224K probably benign Het
Pde4a T C 9: 21,203,554 probably null Het
Pfkfb3 T C 2: 11,483,994 T320A probably benign Het
Plekhm2 T C 4: 141,637,419 probably benign Het
Rabgap1l C T 1: 160,472,071 R584H probably damaging Het
Rnf157 T A 11: 116,396,226 N57I probably damaging Het
Rtf1 G A 2: 119,701,266 probably null Het
Sap130 C A 18: 31,649,602 R189S probably damaging Het
Slc17a2 T G 13: 23,819,042 V225G probably benign Het
Smg1 T C 7: 118,186,146 probably benign Het
Tecta G A 9: 42,337,193 T1971I probably damaging Het
Tmem136 A T 9: 43,111,564 V165E probably damaging Het
Tmem263 T A 10: 85,114,410 S22T probably benign Het
Tnrc18 A T 5: 142,787,294 F410L unknown Het
Ttc27 T G 17: 74,780,911 probably benign Het
Vmn1r45 A T 6: 89,933,686 C101S probably damaging Het
Wdr17 T C 8: 54,659,703 K781E probably damaging Het
Other mutations in Xkr6
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00335:Xkr6 APN 14 63819215 missense probably damaging 0.96
IGL01419:Xkr6 APN 14 63818876 missense probably benign 0.39
IGL01450:Xkr6 APN 14 63798215 missense probably damaging 0.98
IGL02352:Xkr6 APN 14 63819707 missense unknown
IGL02359:Xkr6 APN 14 63819707 missense unknown
R0148:Xkr6 UTSW 14 63819549 missense unknown
R0521:Xkr6 UTSW 14 63819422 missense probably benign 0.28
R1555:Xkr6 UTSW 14 63818925 missense unknown
R1619:Xkr6 UTSW 14 63819317 missense probably benign 0.39
R1874:Xkr6 UTSW 14 63798296 missense unknown
R2864:Xkr6 UTSW 14 63819756 missense unknown
R2960:Xkr6 UTSW 14 63607137 missense possibly damaging 0.71
R3014:Xkr6 UTSW 14 63819344 missense unknown
R4888:Xkr6 UTSW 14 63819504 missense unknown
R5019:Xkr6 UTSW 14 63819066 missense unknown
R5193:Xkr6 UTSW 14 63818907 missense possibly damaging 0.92
R5354:Xkr6 UTSW 14 63818904 missense possibly damaging 0.48
R5485:Xkr6 UTSW 14 63819384 missense unknown
R5825:Xkr6 UTSW 14 63819032 missense probably benign 0.39
R5885:Xkr6 UTSW 14 63606911 missense probably damaging 0.99
R6074:Xkr6 UTSW 14 63607070 missense possibly damaging 0.67
R6861:Xkr6 UTSW 14 63819644 missense probably benign 0.39
R7289:Xkr6 UTSW 14 63798299 missense unknown
R7477:Xkr6 UTSW 14 63606680 missense possibly damaging 0.84
R7525:Xkr6 UTSW 14 63819161 missense probably benign 0.39
R7528:Xkr6 UTSW 14 63819161 missense probably benign 0.39
R7529:Xkr6 UTSW 14 63819161 missense probably benign 0.39
R7646:Xkr6 UTSW 14 63606974 missense probably damaging 0.99
R7686:Xkr6 UTSW 14 63606846 missense possibly damaging 0.96
R7697:Xkr6 UTSW 14 63607179 missense probably damaging 0.99
R8331:Xkr6 UTSW 14 63818943 missense unknown
Z1176:Xkr6 UTSW 14 63606945 missense probably benign 0.08
Posted On2014-05-07