Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02023:Vmn2r25'

184023

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Vmn2r25

Ensembl Gene

ENSMUSG00000094672

Gene Name

vomeronasal 2, receptor 25

Synonyms

EG545874

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.119) question?

Stock #

IGL02023

Quality Score

Status

Chromosome

Chromosomal Location

123799773-123830149 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 123816388 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Asparagine to Aspartic acid at position 398 (N398D)

Ref Sequence

ENSEMBL: ENSMUSP00000124342 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000162046]

AlphaFold

W4VSP2

Predicted Effect

probably damaging
Transcript: ENSMUST00000162046
AA Change: N398D

PolyPhen 2 Score 0.963 (Sensitivity: 0.78; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000124342
Gene: ENSMUSG00000094672
AA Change: N398D

Domain	Start	End	E-Value	Type
signal peptide	1	22	N/A	INTRINSIC
Pfam:ANF_receptor	82	473	6e-31	PFAM
Pfam:NCD3G	519	572	5.8e-25	PFAM
Pfam:7tm_3	603	840	4.8e-55	PFAM

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 44 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca8a	T	C	11: 109,953,942 (GRCm39)	K833E	probably benign	Het
Adam29	T	C	8: 56,325,519 (GRCm39)	I312V	probably benign	Het
Adcy8	T	A	15: 64,694,069 (GRCm39)	I403F	probably damaging	Het
Ahcyl1	A	T	3: 107,575,010 (GRCm39)	N444K	probably damaging	Het
Ang4	T	C	14: 52,001,511 (GRCm39)		probably benign	Het
Atf6b	T	C	17: 34,870,841 (GRCm39)	V401A	possibly damaging	Het
Atp7a	A	T	X: 105,138,588 (GRCm39)	I604F	probably damaging	Het
Cd151	T	C	7: 141,050,370 (GRCm39)	Y202H	probably damaging	Het
Cd99l2	A	T	X: 70,493,552 (GRCm39)	N64K	possibly damaging	Het
Cog7	C	T	7: 121,543,000 (GRCm39)		probably null	Het
Decr2	A	T	17: 26,306,354 (GRCm39)	M94K	probably benign	Het
Dock11	A	T	X: 35,232,422 (GRCm39)	H188L	probably benign	Het
Dscam	T	C	16: 96,602,397 (GRCm39)	S682G	probably benign	Het
Efcab3	A	T	11: 104,612,258 (GRCm39)		probably benign	Het
Gja3	G	T	14: 57,273,136 (GRCm39)	P412Q	probably damaging	Het
Glrb	T	C	3: 80,758,262 (GRCm39)	N333D	probably benign	Het
Gpr65	T	A	12: 98,242,127 (GRCm39)	V260D	probably benign	Het
Hormad1	A	G	3: 95,485,604 (GRCm39)	E264G	possibly damaging	Het
Hsph1	T	C	5: 149,557,324 (GRCm39)	R46G	probably damaging	Het
Hycc2	G	A	1: 58,569,274 (GRCm39)	A435V	possibly damaging	Het
Iars1	A	G	13: 49,841,725 (GRCm39)	Y71C	probably damaging	Het
Lsg1	T	C	16: 30,404,494 (GRCm39)	H35R	probably damaging	Het
Mfge8	C	T	7: 78,794,985 (GRCm39)		probably benign	Het
Mgat4c	T	A	10: 102,214,045 (GRCm39)	Y9*	probably null	Het
Mpdz	A	T	4: 81,247,766 (GRCm39)	I1074N	probably damaging	Het
Muc19	T	C	15: 91,772,453 (GRCm39)		noncoding transcript	Het
Nbea	A	T	3: 55,588,437 (GRCm39)	M2434K	probably damaging	Het
Ncoa2	A	G	1: 13,245,078 (GRCm39)	L540P	probably damaging	Het
Nhsl2	A	G	X: 101,121,858 (GRCm39)	R554G	probably damaging	Het
Npdc1	T	A	2: 25,298,032 (GRCm39)		probably benign	Het
Or2aj6	A	T	16: 19,443,158 (GRCm39)	S231T	probably benign	Het
Osbpl10	T	A	9: 115,055,790 (GRCm39)	V654D	probably damaging	Het
Plxna1	C	A	6: 89,334,314 (GRCm39)	G105V	possibly damaging	Het
Pnma8b	T	C	7: 16,679,616 (GRCm39)	V200A	probably damaging	Het
Ppard	A	G	17: 28,517,871 (GRCm39)	H313R	probably benign	Het
Rasgrp4	T	C	7: 28,838,335 (GRCm39)	L103P	probably damaging	Het
Rigi	A	G	4: 40,216,487 (GRCm39)	Y504H	possibly damaging	Het
Ripk4	A	T	16: 97,556,431 (GRCm39)	L104Q	probably damaging	Het
Setd2	T	C	9: 110,423,704 (GRCm39)	V2253A	probably benign	Het
Setdb2	A	G	14: 59,668,607 (GRCm39)	S43P	probably damaging	Het
Stab2	C	A	10: 86,707,695 (GRCm39)	G1742V	possibly damaging	Het
Timm23	A	G	14: 31,915,804 (GRCm39)		probably benign	Het
Ttn	T	C	2: 76,615,999 (GRCm39)	N14902S	possibly damaging	Het
Ush2a	A	G	1: 188,465,711 (GRCm39)	T2760A	probably benign	Het

Other mutations in Vmn2r25

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00087:Vmn2r25	APN	6	123,830,130 (GRCm39)	missense	probably benign	0.25
IGL01781:Vmn2r25	APN	6	123,816,324 (GRCm39)	missense	possibly damaging	0.48
IGL01843:Vmn2r25	APN	6	123,829,962 (GRCm39)	missense	possibly damaging	0.67
IGL02502:Vmn2r25	APN	6	123,816,392 (GRCm39)	missense	probably damaging	0.96
IGL02709:Vmn2r25	APN	6	123,816,723 (GRCm39)	missense	possibly damaging	0.50
IGL03053:Vmn2r25	APN	6	123,800,077 (GRCm39)	missense	probably damaging	1.00
PIT4468001:Vmn2r25	UTSW	6	123,816,557 (GRCm39)	missense	probably benign	0.00
PIT4812001:Vmn2r25	UTSW	6	123,800,447 (GRCm39)	missense	probably damaging	1.00
R0054:Vmn2r25	UTSW	6	123,829,984 (GRCm39)	missense	probably benign	0.00
R0312:Vmn2r25	UTSW	6	123,805,539 (GRCm39)	splice site	probably benign
R0366:Vmn2r25	UTSW	6	123,800,581 (GRCm39)	nonsense	probably null
R0390:Vmn2r25	UTSW	6	123,800,140 (GRCm39)	missense	probably damaging	1.00
R0466:Vmn2r25	UTSW	6	123,829,008 (GRCm39)	missense	probably benign	0.16
R0541:Vmn2r25	UTSW	6	123,816,786 (GRCm39)	missense	probably damaging	0.97
R0612:Vmn2r25	UTSW	6	123,816,481 (GRCm39)	missense	probably damaging	1.00
R0865:Vmn2r25	UTSW	6	123,829,976 (GRCm39)	missense	probably benign	0.09
R1219:Vmn2r25	UTSW	6	123,816,282 (GRCm39)	missense	probably benign	0.00
R1240:Vmn2r25	UTSW	6	123,828,864 (GRCm39)	missense	probably damaging	0.98
R1701:Vmn2r25	UTSW	6	123,828,754 (GRCm39)	splice site	probably null
R1780:Vmn2r25	UTSW	6	123,805,424 (GRCm39)	missense	probably damaging	1.00
R1809:Vmn2r25	UTSW	6	123,802,337 (GRCm39)	missense	probably benign	0.00
R1833:Vmn2r25	UTSW	6	123,816,643 (GRCm39)	missense	probably benign	0.01
R1964:Vmn2r25	UTSW	6	123,800,254 (GRCm39)	missense	possibly damaging	0.94
R2154:Vmn2r25	UTSW	6	123,816,805 (GRCm39)	missense	probably benign	0.01
R2164:Vmn2r25	UTSW	6	123,816,518 (GRCm39)	missense	possibly damaging	0.96
R3799:Vmn2r25	UTSW	6	123,830,143 (GRCm39)	missense	probably benign	0.12
R3836:Vmn2r25	UTSW	6	123,830,044 (GRCm39)	missense	probably damaging	1.00
R3946:Vmn2r25	UTSW	6	123,817,057 (GRCm39)	missense	probably damaging	0.97
R4282:Vmn2r25	UTSW	6	123,800,606 (GRCm39)	missense	probably damaging	1.00
R4367:Vmn2r25	UTSW	6	123,805,496 (GRCm39)	missense	probably damaging	1.00
R4438:Vmn2r25	UTSW	6	123,816,756 (GRCm39)	missense	probably benign	0.03
R4488:Vmn2r25	UTSW	6	123,799,819 (GRCm39)	missense	probably damaging	1.00
R4580:Vmn2r25	UTSW	6	123,799,982 (GRCm39)	missense	possibly damaging	0.46
R4631:Vmn2r25	UTSW	6	123,829,962 (GRCm39)	missense	possibly damaging	0.94
R4765:Vmn2r25	UTSW	6	123,800,182 (GRCm39)	missense	probably damaging	1.00
R4908:Vmn2r25	UTSW	6	123,805,406 (GRCm39)	missense	probably benign
R5207:Vmn2r25	UTSW	6	123,817,062 (GRCm39)	missense	probably damaging	1.00
R5254:Vmn2r25	UTSW	6	123,802,277 (GRCm39)	missense	probably damaging	1.00
R5444:Vmn2r25	UTSW	6	123,805,451 (GRCm39)	missense	probably benign	0.00
R5586:Vmn2r25	UTSW	6	123,802,255 (GRCm39)	missense	probably damaging	1.00
R5607:Vmn2r25	UTSW	6	123,805,318 (GRCm39)	missense	possibly damaging	0.49
R5985:Vmn2r25	UTSW	6	123,800,587 (GRCm39)	missense	probably benign
R6046:Vmn2r25	UTSW	6	123,799,876 (GRCm39)	missense	probably damaging	1.00
R6057:Vmn2r25	UTSW	6	123,799,900 (GRCm39)	missense	possibly damaging	0.69
R6569:Vmn2r25	UTSW	6	123,828,941 (GRCm39)	missense	probably benign	0.01
R6826:Vmn2r25	UTSW	6	123,800,071 (GRCm39)	missense	probably damaging	1.00
R7054:Vmn2r25	UTSW	6	123,800,569 (GRCm39)	missense	probably damaging	1.00
R7120:Vmn2r25	UTSW	6	123,805,394 (GRCm39)	missense	possibly damaging	0.51
R7177:Vmn2r25	UTSW	6	123,816,882 (GRCm39)	missense	possibly damaging	0.94
R7287:Vmn2r25	UTSW	6	123,829,040 (GRCm39)	missense	possibly damaging	0.49
R7397:Vmn2r25	UTSW	6	123,800,498 (GRCm39)	missense	probably damaging	0.96
R7486:Vmn2r25	UTSW	6	123,800,101 (GRCm39)	missense	probably damaging	1.00
R7699:Vmn2r25	UTSW	6	123,816,882 (GRCm39)	missense	possibly damaging	0.94
R7700:Vmn2r25	UTSW	6	123,816,882 (GRCm39)	missense	possibly damaging	0.94
R7759:Vmn2r25	UTSW	6	123,800,339 (GRCm39)	missense	probably damaging	0.99
R7802:Vmn2r25	UTSW	6	123,828,791 (GRCm39)	missense	possibly damaging	0.88
R7850:Vmn2r25	UTSW	6	123,805,431 (GRCm39)	missense	probably damaging	1.00
R8064:Vmn2r25	UTSW	6	123,800,581 (GRCm39)	nonsense	probably null
R8170:Vmn2r25	UTSW	6	123,829,976 (GRCm39)	missense	probably benign	0.09
R8340:Vmn2r25	UTSW	6	123,829,972 (GRCm39)	missense	probably benign	0.01
R8346:Vmn2r25	UTSW	6	123,802,350 (GRCm39)	missense	probably benign	0.00
R8395:Vmn2r25	UTSW	6	123,799,982 (GRCm39)	missense	possibly damaging	0.81
R8889:Vmn2r25	UTSW	6	123,800,569 (GRCm39)	missense	probably damaging	1.00
R9094:Vmn2r25	UTSW	6	123,805,391 (GRCm39)	missense	probably benign	0.44
R9204:Vmn2r25	UTSW	6	123,830,092 (GRCm39)	missense	probably benign	0.00
R9253:Vmn2r25	UTSW	6	123,816,960 (GRCm39)	missense	probably damaging	0.98
R9392:Vmn2r25	UTSW	6	123,816,937 (GRCm39)	missense	probably benign
R9520:Vmn2r25	UTSW	6	123,830,066 (GRCm39)	nonsense	probably null
R9525:Vmn2r25	UTSW	6	123,800,164 (GRCm39)	missense	probably damaging	1.00
R9622:Vmn2r25	UTSW	6	123,816,579 (GRCm39)	missense	probably damaging	0.99
X0020:Vmn2r25	UTSW	6	123,816,359 (GRCm39)	missense	possibly damaging	0.95
Z1176:Vmn2r25	UTSW	6	123,799,856 (GRCm39)	missense	probably damaging	1.00

Posted On

2014-05-07