Incidental Mutation 'IGL02033:BC027072'
ID184434
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol BC027072
Ensembl Gene ENSMUSG00000044375
Gene NamecDNA sequence BC027072
Synonyms
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.122) question?
Stock #IGL02033
Quality Score
Status
Chromosome17
Chromosomal Location71743557-71752885 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to A at 71751081 bp
ZygosityHeterozygous
Amino Acid Change Isoleucine to Phenylalanine at position 534 (I534F)
Ref Sequence ENSEMBL: ENSMUSP00000051871 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000057405]
Predicted Effect probably damaging
Transcript: ENSMUST00000057405
AA Change: I534F

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000051871
Gene: ENSMUSG00000044375
AA Change: I534F

DomainStartEndE-ValueType
Pfam:Retinal 1 1255 N/A PFAM
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is highly expressed in photoreceptors and may associate with the primary cilium of the outer segment. The encoded protein appears to undergo post-translational lipid modification. Nonsense and missense variants of this gene appear to cause a recessive form of retinitis pigmentosa. [provided by RefSeq, Jun 2010]
PHENOTYPE: Mice homozygous for a knock-out allele develop severe early-onset retinal degeneration associated with a disorganized outer segment, progressive thinning of the outer nuclear layer, microglia activation, decreased a- and b-wave amplitudes, and nearly undetectable ERG responses by 8 weeks of age. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 32 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2210408I21Rik T A 13: 77,259,876 F107L possibly damaging Het
Adam30 G T 3: 98,161,471 V79F probably benign Het
Akap8l T C 17: 32,338,272 R122G probably damaging Het
Apc T A 18: 34,310,719 S570R probably damaging Het
Btnl10 A G 11: 58,919,315 E94G probably damaging Het
Col25a1 A T 3: 130,388,948 probably benign Het
Cubn A C 2: 13,339,846 I2208S probably damaging Het
Cyp17a1 A T 19: 46,672,607 Y79* probably null Het
Dach1 T A 14: 97,901,429 H474L possibly damaging Het
Dscaml1 A T 9: 45,683,782 I728F probably damaging Het
Erp29 G T 5: 121,452,242 S33R probably benign Het
Fat3 A C 9: 15,915,352 S4435A possibly damaging Het
Fbxw13 T C 9: 109,181,416 I385V probably damaging Het
Hspg2 T C 4: 137,552,254 M3160T probably benign Het
Lrrc28 C T 7: 67,559,857 probably null Het
Myh15 T C 16: 49,145,344 V1204A probably benign Het
Olfr1457 T C 19: 13,094,857 S91G possibly damaging Het
Pde5a G A 3: 122,803,061 E434K possibly damaging Het
Pgr T A 9: 8,965,110 V753E probably damaging Het
Pik3c3 T A 18: 30,312,650 S563R possibly damaging Het
Ppt2 A G 17: 34,625,754 probably benign Het
Prg4 T A 1: 150,455,868 probably benign Het
Pygo1 G T 9: 72,945,401 S290I possibly damaging Het
Ralgapa1 G T 12: 55,642,477 H1946N possibly damaging Het
Rap1gds1 A G 3: 138,955,471 probably benign Het
Sema4g G A 19: 44,997,415 R256H probably damaging Het
Slc22a12 T G 19: 6,537,814 D370A probably benign Het
Spata16 G A 3: 26,913,334 probably null Het
Trim44 A G 2: 102,400,176 M170T possibly damaging Het
Trpv6 A T 6: 41,627,617 probably benign Het
Vwa8 T G 14: 78,984,209 L535R possibly damaging Het
Wdr78 G T 4: 103,066,293 N123K possibly damaging Het
Other mutations in BC027072
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02010:BC027072 APN 17 71749464 missense probably benign 0.38
IGL02711:BC027072 APN 17 71749382 missense probably benign 0.15
IGL03185:BC027072 APN 17 71749337 missense probably damaging 0.98
IGL03242:BC027072 APN 17 71750271 missense probably benign 0.01
R0367:BC027072 UTSW 17 71750476 missense probably damaging 1.00
R0413:BC027072 UTSW 17 71752217 missense probably benign 0.38
R0465:BC027072 UTSW 17 71750160 missense probably benign 0.42
R0535:BC027072 UTSW 17 71752439 missense probably benign 0.01
R0681:BC027072 UTSW 17 71749514 missense probably benign 0.00
R0736:BC027072 UTSW 17 71744664 missense probably benign 0.00
R1406:BC027072 UTSW 17 71749161 missense probably benign 0.18
R1406:BC027072 UTSW 17 71749161 missense probably benign 0.18
R1530:BC027072 UTSW 17 71749478 missense probably benign 0.01
R1723:BC027072 UTSW 17 71750378 missense probably damaging 1.00
R1941:BC027072 UTSW 17 71752068 missense probably damaging 1.00
R2179:BC027072 UTSW 17 71752526 missense probably damaging 1.00
R2232:BC027072 UTSW 17 71749284 missense probably benign 0.00
R2519:BC027072 UTSW 17 71751647 missense probably damaging 1.00
R2997:BC027072 UTSW 17 71744711 critical splice acceptor site probably benign
R3899:BC027072 UTSW 17 71750160 missense probably benign 0.00
R4890:BC027072 UTSW 17 71752311 missense possibly damaging 0.50
R4898:BC027072 UTSW 17 71751071 missense probably damaging 1.00
R5347:BC027072 UTSW 17 71749935 missense probably benign 0.00
R5436:BC027072 UTSW 17 71750842 missense probably damaging 1.00
R5527:BC027072 UTSW 17 71752640 missense probably damaging 1.00
R5556:BC027072 UTSW 17 71752425 missense possibly damaging 0.81
R5625:BC027072 UTSW 17 71751326 missense probably damaging 1.00
R5707:BC027072 UTSW 17 71751572 missense possibly damaging 0.90
R5932:BC027072 UTSW 17 71751753 missense probably damaging 1.00
R6043:BC027072 UTSW 17 71750042 missense probably damaging 1.00
R6314:BC027072 UTSW 17 71752457 missense probably benign 0.04
R6513:BC027072 UTSW 17 71744706 missense probably damaging 1.00
R7575:BC027072 UTSW 17 71750855 missense probably damaging 1.00
R7638:BC027072 UTSW 17 71750885 missense probably damaging 1.00
R7848:BC027072 UTSW 17 71749193 missense probably benign 0.04
R8317:BC027072 UTSW 17 71749202 missense probably benign 0.10
X0035:BC027072 UTSW 17 71744711 critical splice acceptor site probably benign
Z1177:BC027072 UTSW 17 71750403 missense probably damaging 1.00
Posted On2014-05-07