Incidental Mutation 'IGL02036:Krba1'
ID |
184516 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Krba1
|
Ensembl Gene |
ENSMUSG00000042810 |
Gene Name |
KRAB-A domain containing 1 |
Synonyms |
A930040G15Rik |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.056)
|
Stock # |
IGL02036
|
Quality Score |
|
Status
|
|
Chromosome |
6 |
Chromosomal Location |
48372520-48396715 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
C to T
at 48392576 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Threonine to Isoleucine
at position 830
(T830I)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000110219
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000031815]
[ENSMUST00000077093]
[ENSMUST00000114571]
[ENSMUST00000114572]
[ENSMUST00000203371]
|
AlphaFold |
Q6NXZ1 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000031815
AA Change: T784I
PolyPhen 2
Score 0.934 (Sensitivity: 0.80; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000031815 Gene: ENSMUSG00000042810 AA Change: T784I
Domain | Start | End | E-Value | Type |
low complexity region
|
31 |
43 |
N/A |
INTRINSIC |
KRBA1
|
154 |
197 |
1.27e-3 |
SMART |
KRBA1
|
249 |
291 |
3.23e-14 |
SMART |
KRBA1
|
310 |
355 |
8.27e-12 |
SMART |
KRBA1
|
357 |
399 |
4.98e-6 |
SMART |
low complexity region
|
452 |
459 |
N/A |
INTRINSIC |
KRBA1
|
474 |
516 |
6.03e-14 |
SMART |
KRBA1
|
576 |
619 |
7.71e-12 |
SMART |
coiled coil region
|
814 |
847 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000077093
AA Change: T795I
PolyPhen 2
Score 0.864 (Sensitivity: 0.83; Specificity: 0.93)
|
SMART Domains |
Protein: ENSMUSP00000076345 Gene: ENSMUSG00000042810 AA Change: T795I
Domain | Start | End | E-Value | Type |
Blast:KRAB
|
1 |
34 |
2e-12 |
BLAST |
KRBA1
|
98 |
141 |
1.27e-3 |
SMART |
KRBA1
|
193 |
235 |
3.23e-14 |
SMART |
KRBA1
|
254 |
299 |
8.27e-12 |
SMART |
KRBA1
|
367 |
409 |
7.26e-8 |
SMART |
low complexity region
|
462 |
469 |
N/A |
INTRINSIC |
KRBA1
|
484 |
526 |
6.03e-14 |
SMART |
KRBA1
|
586 |
629 |
7.71e-12 |
SMART |
coiled coil region
|
824 |
857 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000114571
AA Change: T795I
PolyPhen 2
Score 0.864 (Sensitivity: 0.83; Specificity: 0.93)
|
SMART Domains |
Protein: ENSMUSP00000110218 Gene: ENSMUSG00000042810 AA Change: T795I
Domain | Start | End | E-Value | Type |
Blast:KRAB
|
1 |
34 |
2e-12 |
BLAST |
KRBA1
|
98 |
141 |
1.27e-3 |
SMART |
KRBA1
|
193 |
235 |
3.23e-14 |
SMART |
KRBA1
|
254 |
299 |
8.27e-12 |
SMART |
KRBA1
|
367 |
409 |
7.26e-8 |
SMART |
low complexity region
|
462 |
469 |
N/A |
INTRINSIC |
KRBA1
|
484 |
526 |
6.03e-14 |
SMART |
KRBA1
|
586 |
629 |
7.71e-12 |
SMART |
coiled coil region
|
824 |
857 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000114572
AA Change: T830I
PolyPhen 2
Score 0.947 (Sensitivity: 0.79; Specificity: 0.95)
|
SMART Domains |
Protein: ENSMUSP00000110219 Gene: ENSMUSG00000042810 AA Change: T830I
Domain | Start | End | E-Value | Type |
Blast:KRAB
|
1 |
34 |
2e-12 |
BLAST |
KRBA1
|
98 |
141 |
1.27e-3 |
SMART |
KRBA1
|
194 |
236 |
3.23e-14 |
SMART |
KRBA1
|
255 |
300 |
8.27e-12 |
SMART |
KRBA1
|
368 |
410 |
7.26e-8 |
SMART |
low complexity region
|
463 |
470 |
N/A |
INTRINSIC |
KRBA1
|
485 |
527 |
6.03e-14 |
SMART |
KRBA1
|
587 |
630 |
7.71e-12 |
SMART |
coiled coil region
|
825 |
858 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000154536
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000203371
AA Change: T794I
PolyPhen 2
Score 0.861 (Sensitivity: 0.83; Specificity: 0.93)
|
SMART Domains |
Protein: ENSMUSP00000145256 Gene: ENSMUSG00000042810 AA Change: T794I
Domain | Start | End | E-Value | Type |
Blast:KRAB
|
1 |
34 |
2e-12 |
BLAST |
KRBA1
|
97 |
140 |
8.1e-8 |
SMART |
KRBA1
|
193 |
235 |
2.5e-18 |
SMART |
KRBA1
|
254 |
299 |
6.4e-16 |
SMART |
KRBA1
|
367 |
409 |
5.7e-12 |
SMART |
low complexity region
|
462 |
469 |
N/A |
INTRINSIC |
KRBA1
|
484 |
526 |
4.6e-18 |
SMART |
KRBA1
|
586 |
629 |
5.8e-16 |
SMART |
coiled coil region
|
824 |
857 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000204554
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 27 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Cep290 |
T |
A |
10: 100,393,962 (GRCm39) |
C2056* |
probably null |
Het |
Cyp2c38 |
T |
A |
19: 39,448,760 (GRCm39) |
D143V |
probably null |
Het |
Ddx10 |
T |
C |
9: 53,115,483 (GRCm39) |
K617R |
probably benign |
Het |
Dgat2l6 |
T |
A |
X: 99,589,199 (GRCm39) |
I336N |
probably damaging |
Het |
Dop1a |
A |
G |
9: 86,413,818 (GRCm39) |
I1906M |
probably benign |
Het |
Dpep3 |
T |
G |
8: 106,700,417 (GRCm39) |
T430P |
probably benign |
Het |
Dph1 |
T |
C |
11: 75,074,991 (GRCm39) |
|
probably null |
Het |
Epha7 |
T |
C |
4: 28,950,509 (GRCm39) |
S775P |
probably damaging |
Het |
F5 |
A |
G |
1: 164,010,571 (GRCm39) |
|
probably benign |
Het |
Fcgbpl1 |
G |
A |
7: 27,836,950 (GRCm39) |
V290M |
possibly damaging |
Het |
Hdx |
T |
A |
X: 110,569,564 (GRCm39) |
T342S |
probably benign |
Het |
Inpp4a |
T |
C |
1: 37,416,650 (GRCm39) |
|
probably benign |
Het |
Itgad |
A |
G |
7: 127,788,993 (GRCm39) |
T515A |
possibly damaging |
Het |
Kcnc2 |
T |
A |
10: 112,291,831 (GRCm39) |
S340T |
possibly damaging |
Het |
Lrch1 |
G |
A |
14: 75,032,733 (GRCm39) |
|
probably benign |
Het |
Mag |
C |
T |
7: 30,607,877 (GRCm39) |
V295M |
probably damaging |
Het |
Mmp16 |
T |
A |
4: 18,093,371 (GRCm39) |
D375E |
probably benign |
Het |
Or2h2 |
A |
G |
17: 37,396,559 (GRCm39) |
F166S |
probably damaging |
Het |
Or2t44 |
T |
C |
11: 58,677,923 (GRCm39) |
Y288H |
probably damaging |
Het |
Or4c111 |
A |
G |
2: 88,843,823 (GRCm39) |
V195A |
probably benign |
Het |
Pcyox1l |
T |
C |
18: 61,840,607 (GRCm39) |
|
probably benign |
Het |
Secisbp2l |
A |
G |
2: 125,600,127 (GRCm39) |
S403P |
probably benign |
Het |
Sh3tc2 |
T |
A |
18: 62,147,978 (GRCm39) |
H1229Q |
probably benign |
Het |
Svep1 |
A |
C |
4: 58,088,245 (GRCm39) |
W1735G |
possibly damaging |
Het |
Tbxas1 |
T |
A |
6: 38,998,091 (GRCm39) |
C220S |
probably benign |
Het |
Vmn1r173 |
G |
T |
7: 23,402,321 (GRCm39) |
M185I |
probably benign |
Het |
Ywhag |
A |
G |
5: 135,940,348 (GRCm39) |
V82A |
probably benign |
Het |
|
Other mutations in Krba1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00584:Krba1
|
APN |
6 |
48,383,252 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL01663:Krba1
|
APN |
6 |
48,388,688 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01764:Krba1
|
APN |
6 |
48,392,770 (GRCm39) |
missense |
probably benign |
0.01 |
IGL02333:Krba1
|
APN |
6 |
48,390,021 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02681:Krba1
|
APN |
6 |
48,381,052 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03069:Krba1
|
APN |
6 |
48,391,483 (GRCm39) |
missense |
possibly damaging |
0.53 |
IGL03380:Krba1
|
APN |
6 |
48,380,387 (GRCm39) |
missense |
possibly damaging |
0.53 |
PIT4151001:Krba1
|
UTSW |
6 |
48,379,831 (GRCm39) |
missense |
probably damaging |
0.99 |
R0077:Krba1
|
UTSW |
6 |
48,382,159 (GRCm39) |
splice site |
probably benign |
|
R0504:Krba1
|
UTSW |
6 |
48,393,188 (GRCm39) |
missense |
probably benign |
0.07 |
R1051:Krba1
|
UTSW |
6 |
48,390,332 (GRCm39) |
missense |
possibly damaging |
0.82 |
R1875:Krba1
|
UTSW |
6 |
48,390,983 (GRCm39) |
splice site |
probably null |
|
R1912:Krba1
|
UTSW |
6 |
48,392,699 (GRCm39) |
missense |
probably benign |
0.45 |
R2084:Krba1
|
UTSW |
6 |
48,391,502 (GRCm39) |
missense |
probably damaging |
1.00 |
R4035:Krba1
|
UTSW |
6 |
48,388,614 (GRCm39) |
missense |
probably damaging |
1.00 |
R4291:Krba1
|
UTSW |
6 |
48,392,599 (GRCm39) |
missense |
possibly damaging |
0.93 |
R4568:Krba1
|
UTSW |
6 |
48,386,657 (GRCm39) |
missense |
probably damaging |
0.98 |
R4619:Krba1
|
UTSW |
6 |
48,383,282 (GRCm39) |
nonsense |
probably null |
|
R4638:Krba1
|
UTSW |
6 |
48,386,685 (GRCm39) |
nonsense |
probably null |
|
R4913:Krba1
|
UTSW |
6 |
48,383,891 (GRCm39) |
missense |
probably benign |
0.00 |
R5174:Krba1
|
UTSW |
6 |
48,389,229 (GRCm39) |
missense |
probably damaging |
1.00 |
R5487:Krba1
|
UTSW |
6 |
48,380,973 (GRCm39) |
missense |
probably damaging |
1.00 |
R5496:Krba1
|
UTSW |
6 |
48,383,290 (GRCm39) |
missense |
possibly damaging |
0.54 |
R5514:Krba1
|
UTSW |
6 |
48,390,429 (GRCm39) |
missense |
probably damaging |
1.00 |
R5879:Krba1
|
UTSW |
6 |
48,392,678 (GRCm39) |
missense |
possibly damaging |
0.89 |
R6351:Krba1
|
UTSW |
6 |
48,391,062 (GRCm39) |
missense |
probably benign |
0.35 |
R6516:Krba1
|
UTSW |
6 |
48,390,206 (GRCm39) |
nonsense |
probably null |
|
R7003:Krba1
|
UTSW |
6 |
48,390,014 (GRCm39) |
missense |
possibly damaging |
0.71 |
R7135:Krba1
|
UTSW |
6 |
48,393,233 (GRCm39) |
missense |
probably benign |
0.01 |
R7202:Krba1
|
UTSW |
6 |
48,389,261 (GRCm39) |
missense |
probably damaging |
1.00 |
R7308:Krba1
|
UTSW |
6 |
48,383,273 (GRCm39) |
missense |
probably benign |
0.04 |
R7936:Krba1
|
UTSW |
6 |
48,388,603 (GRCm39) |
missense |
probably damaging |
1.00 |
R8750:Krba1
|
UTSW |
6 |
48,382,212 (GRCm39) |
missense |
probably damaging |
0.97 |
R8894:Krba1
|
UTSW |
6 |
48,388,629 (GRCm39) |
missense |
probably damaging |
0.98 |
R9726:Krba1
|
UTSW |
6 |
48,389,298 (GRCm39) |
missense |
possibly damaging |
0.91 |
Z1177:Krba1
|
UTSW |
6 |
48,392,828 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1177:Krba1
|
UTSW |
6 |
48,390,190 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Posted On |
2014-05-07 |