Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02045:Barx2'

184911

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Barx2

Ensembl Gene

ENSMUSG00000032033

Gene Name

BarH-like homeobox 2

Synonyms

2310006E12Rik, Barx2b

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.680) question?

Stock #

IGL02045

Quality Score

Status

Chromosome

Chromosomal Location

31757340-31824581 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 31770094 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 145 (T145A)

Ref Sequence

ENSEMBL: ENSMUSP00000112314 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000116615]

AlphaFold

O08686

Predicted Effect

probably damaging
Transcript: ENSMUST00000116615
AA Change: T145A

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000112314
Gene: ENSMUSG00000032033
AA Change: T145A

Domain	Start	End	E-Value	Type
low complexity region	103	113	N/A	INTRINSIC
HOX	137	199	3.2e-25	SMART
low complexity region	230	246	N/A	INTRINSIC
low complexity region	268	283	N/A	INTRINSIC

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the homeobox transcription factor family. A highly related protein in mouse has been shown to influence cellular processes that control cell adhesion and remodeling of the actin cytoskeleton in myoblast fusion and chondrogenesis. The encoded protein may also play a role in cancer progression. [provided by RefSeq, Jul 2008]
PHENOTYPE: Mice homozygous for a targeted gene deletion exhibit short whiskers at birth, defective juvenile hair follicle remodeling, and short adult hair. Fifty percent of homozygotes are born with open eyelids. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 38 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acacb	C	A	5: 114,378,721 (GRCm39)	H2044Q	possibly damaging	Het
Ankrd12	A	T	17: 66,293,244 (GRCm39)	S730T	probably benign	Het
Ano9	A	T	7: 140,682,382 (GRCm39)	N655K	probably benign	Het
Ap1ar	A	T	3: 127,609,298 (GRCm39)	Y108N	probably damaging	Het
Asap3	A	G	4: 135,954,752 (GRCm39)	I55V	probably benign	Het
Camta1	T	C	4: 151,158,442 (GRCm39)		probably null	Het
Ces2e	C	T	8: 105,657,290 (GRCm39)		probably benign	Het
Cflar	T	C	1: 58,791,903 (GRCm39)	I405T	probably benign	Het
Cibar2	T	A	8: 120,896,461 (GRCm39)	K174*	probably null	Het
Cyp51	A	G	5: 4,133,247 (GRCm39)	S464P	probably damaging	Het
Ermard	G	A	17: 15,271,826 (GRCm39)		probably benign	Het
Glb1l2	T	C	9: 26,707,841 (GRCm39)	T49A	probably benign	Het
Gls	A	G	1: 52,258,674 (GRCm39)	V198A	probably benign	Het
Heatr5b	A	T	17: 79,115,855 (GRCm39)	I867N	probably damaging	Het
Ighv1-14	A	T	12: 114,610,334 (GRCm39)		noncoding transcript	Het
Iqsec1	T	C	6: 90,641,051 (GRCm39)	K1022E	probably damaging	Het
Myo10	A	G	15: 25,726,574 (GRCm39)	T299A	probably benign	Het
Nr2e3	A	T	9: 59,856,291 (GRCm39)	M82K	probably benign	Het
Ntpcr	A	G	8: 126,472,191 (GRCm39)		probably benign	Het
Or1e26	A	G	11: 73,480,058 (GRCm39)	C169R	probably damaging	Het
Or4d10b	T	C	19: 12,036,253 (GRCm39)	T288A	possibly damaging	Het
Or52s6	A	G	7: 103,092,159 (GRCm39)	L57P	probably damaging	Het
Or5p80	A	G	7: 108,229,739 (GRCm39)	D180G	probably damaging	Het
Or6c70	A	T	10: 129,710,091 (GRCm39)	D178E	probably benign	Het
Prkcb	A	G	7: 122,189,390 (GRCm39)	D506G	probably damaging	Het
Rasgef1a	A	G	6: 118,066,404 (GRCm39)	I470V	probably benign	Het
Rbm27	A	G	18: 42,452,978 (GRCm39)	E514G	possibly damaging	Het
Rgs22	G	A	15: 36,013,300 (GRCm39)	A1048V	probably benign	Het
Secisbp2l	A	G	2: 125,617,498 (GRCm39)	F60L	possibly damaging	Het
Six4	T	C	12: 73,155,429 (GRCm39)	S505G	probably benign	Het
Skint1	T	A	4: 111,882,727 (GRCm39)	V257E	possibly damaging	Het
Smad9	A	G	3: 54,693,593 (GRCm39)	N174S	possibly damaging	Het
Smc2	A	G	4: 52,462,914 (GRCm39)	N635D	probably benign	Het
Stradb	T	A	1: 59,028,937 (GRCm39)	I135N	probably damaging	Het
Syt12	T	C	19: 4,497,762 (GRCm39)	T407A	probably damaging	Het
Tmc8	T	A	11: 117,677,346 (GRCm39)	I322N	probably damaging	Het
Tnip1	A	C	11: 54,802,365 (GRCm39)	*648G	probably null	Het
Ttc3	T	C	16: 94,210,540 (GRCm39)		probably benign	Het

Other mutations in Barx2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00481:Barx2	APN	9	31,758,141 (GRCm39)	missense	unknown
IGL03341:Barx2	APN	9	31,770,090 (GRCm39)	missense	probably damaging	1.00
R1401:Barx2	UTSW	9	31,770,327 (GRCm39)	missense	probably damaging	1.00
R1982:Barx2	UTSW	9	31,824,308 (GRCm39)	missense	probably damaging	1.00
R2436:Barx2	UTSW	9	31,824,383 (GRCm39)	missense	probably damaging	0.99
R4543:Barx2	UTSW	9	31,758,092 (GRCm39)	missense	unknown
R4804:Barx2	UTSW	9	31,758,108 (GRCm39)	missense	unknown
R5399:Barx2	UTSW	9	31,765,407 (GRCm39)	critical splice donor site	probably null
R5436:Barx2	UTSW	9	31,824,285 (GRCm39)	missense	probably damaging	1.00
R5700:Barx2	UTSW	9	31,770,061 (GRCm39)	missense	probably damaging	1.00
R6036:Barx2	UTSW	9	31,824,304 (GRCm39)	missense	probably damaging	1.00
R6036:Barx2	UTSW	9	31,824,304 (GRCm39)	missense	probably damaging	1.00
R6042:Barx2	UTSW	9	31,758,199 (GRCm39)	missense	probably benign	0.35
R6533:Barx2	UTSW	9	31,824,275 (GRCm39)	missense	probably damaging	1.00
R6618:Barx2	UTSW	9	31,758,168 (GRCm39)	missense	probably benign	0.01
R8242:Barx2	UTSW	9	31,824,227 (GRCm39)	missense	probably damaging	1.00
R8307:Barx2	UTSW	9	31,770,307 (GRCm39)	missense	probably damaging	1.00
R8507:Barx2	UTSW	9	31,770,309 (GRCm39)	missense	probably damaging	1.00
R8722:Barx2	UTSW	9	31,824,280 (GRCm39)	missense	probably damaging	1.00
R9089:Barx2	UTSW	9	31,765,443 (GRCm39)	missense	probably damaging	1.00
R9470:Barx2	UTSW	9	31,770,044 (GRCm39)	nonsense	probably null
R9720:Barx2	UTSW	9	31,765,407 (GRCm39)	critical splice donor site	probably null
Z1088:Barx2	UTSW	9	31,758,162 (GRCm39)	missense	possibly damaging	0.59

Posted On

2014-05-07