Incidental Mutation 'IGL02049:Trav13-2'
ID 185024
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Trav13-2
Ensembl Gene ENSMUSG00000076846
Gene Name T cell receptor alpha variable 13-2
Synonyms
Accession Numbers
Essential gene? Not available question?
Stock # IGL02049
Quality Score
Status
Chromosome 14
Chromosomal Location 53872345-53872856 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) G to T at 53872603 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glutamine to Histidine at position 26 (Q26H)
Ref Sequence ENSEMBL: ENSMUSP00000100435 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000103658]
AlphaFold A0A075B649
Predicted Effect probably damaging
Transcript: ENSMUST00000103658
AA Change: Q26H

PolyPhen 2 Score 0.979 (Sensitivity: 0.75; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000100435
Gene: ENSMUSG00000076846
AA Change: Q26H

DomainStartEndE-ValueType
low complexity region 4 13 N/A INTRINSIC
IGv 38 109 1.55e-9 SMART
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 38 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930568D16Rik T A 2: 35,254,801 (GRCm39) R27S probably benign Het
4930596D02Rik C A 14: 35,533,535 (GRCm39) V78L probably benign Het
Abca3 T A 17: 24,595,704 (GRCm39) C352* probably null Het
Acat3 T A 17: 13,144,207 (GRCm39) Y324F probably benign Het
Adamts8 T C 9: 30,862,650 (GRCm39) V285A probably damaging Het
Anpep A G 7: 79,484,929 (GRCm39) I652T probably damaging Het
Arhgef6 T A X: 56,321,271 (GRCm39) Q320L probably damaging Het
Armh1 A T 4: 117,094,860 (GRCm39) I60K probably benign Het
Atp11b T C 3: 35,854,642 (GRCm39) V145A probably damaging Het
Cacna1c T C 6: 118,580,880 (GRCm39) T1674A probably benign Het
Capn2 A T 1: 182,301,519 (GRCm39) probably benign Het
Cfd A G 10: 79,726,776 (GRCm39) Y6C probably benign Het
Cps1 A G 1: 67,183,113 (GRCm39) K157R possibly damaging Het
Csmd3 T A 15: 47,864,870 (GRCm39) R786S possibly damaging Het
Dna2 A T 10: 62,792,815 (GRCm39) I277L probably damaging Het
Gm5168 A T X: 25,999,005 (GRCm39) D50E probably damaging Het
Grik4 T A 9: 42,455,049 (GRCm39) probably benign Het
Ift56 A G 6: 38,402,067 (GRCm39) T520A probably benign Het
Iqgap2 A G 13: 95,811,913 (GRCm39) probably benign Het
Klk10 A T 7: 43,433,882 (GRCm39) probably benign Het
Kng1 A G 16: 22,892,187 (GRCm39) Y250C probably damaging Het
Las1l A T X: 94,981,059 (GRCm39) M690K probably benign Het
Mug1 T A 6: 121,848,295 (GRCm39) M673K probably benign Het
Myh9 T C 15: 77,654,070 (GRCm39) H1245R probably benign Het
Oprk1 C T 1: 5,669,067 (GRCm39) T171I probably damaging Het
Pgm5 A T 19: 24,801,782 (GRCm39) S149T probably benign Het
Pla2g4a T C 1: 149,736,847 (GRCm39) N424S probably benign Het
Plec A T 15: 76,063,149 (GRCm39) L2334Q probably damaging Het
Pus7l G A 15: 94,438,059 (GRCm39) S262F probably damaging Het
Rps24 C A 14: 24,541,823 (GRCm39) D3E probably benign Het
Rxfp1 T C 3: 79,557,799 (GRCm39) N560D probably damaging Het
Sema3c C T 5: 17,926,923 (GRCm39) probably benign Het
Slc47a2 A G 11: 61,233,365 (GRCm39) F55S probably damaging Het
Slco1a6 A G 6: 142,047,309 (GRCm39) probably benign Het
Taf4b A T 18: 14,963,196 (GRCm39) E645D probably benign Het
Tmem161a T A 8: 70,631,624 (GRCm39) V158E probably damaging Het
Vmn2r108 T A 17: 20,691,608 (GRCm39) H305L probably benign Het
Zfp263 A G 16: 3,562,482 (GRCm39) I82V probably damaging Het
Other mutations in Trav13-2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00435:Trav13-2 APN 14 53,872,688 (GRCm39) missense possibly damaging 0.92
IGL01975:Trav13-2 APN 14 53,872,823 (GRCm39) missense possibly damaging 0.95
IGL02049:Trav13-2 APN 14 53,872,602 (GRCm39) missense possibly damaging 0.85
IGL02049:Trav13-2 APN 14 53,872,604 (GRCm39) missense possibly damaging 0.92
IGL02977:Trav13-2 APN 14 53,872,764 (GRCm39) missense probably damaging 0.99
R4109:Trav13-2 UTSW 14 53,872,698 (GRCm39) missense probably benign
R7493:Trav13-2 UTSW 14 53,872,363 (GRCm39) missense possibly damaging 0.85
Posted On 2014-05-07