Incidental Mutation 'IGL02055:Vmn1r42'
ID185216
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r42
Ensembl Gene ENSMUSG00000068232
Gene Namevomeronasal 1 receptor 42
SynonymsV1ra6
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.060) question?
Stock #IGL02055
Quality Score
Status
Chromosome6
Chromosomal Location89842573-89876413 bp(-) (GRCm38)
Type of Mutationutr 5 prime
DNA Base Change (assembly) T to C at 89845589 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000154442 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000089419] [ENSMUST00000226436] [ENSMUST00000227279]
Predicted Effect probably benign
Transcript: ENSMUST00000089419
SMART Domains Protein: ENSMUSP00000086840
Gene: ENSMUSG00000068232

DomainStartEndE-ValueType
Pfam:V1R 54 318 3.6e-132 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000226436
Predicted Effect probably benign
Transcript: ENSMUST00000227279
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 34 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2610507B11Rik A G 11: 78,286,631 T1921A probably damaging Het
Ap1b1 T A 11: 5,024,452 C353* probably null Het
Asl C T 5: 130,013,050 G309R possibly damaging Het
B4galnt4 T C 7: 141,070,818 F835S probably damaging Het
Carmil2 A G 8: 105,696,907 probably benign Het
Ccnt2 C A 1: 127,791,710 P116T possibly damaging Het
Clcn1 T G 6: 42,307,555 M609R probably damaging Het
Csmd1 A G 8: 16,069,001 I1858T probably damaging Het
Eefsec T C 6: 88,376,403 I95V probably damaging Het
Galk2 A G 2: 125,931,404 K252R probably benign Het
Gbp2 A T 3: 142,632,230 N369I probably benign Het
Glis2 G T 16: 4,614,108 probably benign Het
Igdcc3 T C 9: 65,181,280 V388A possibly damaging Het
Klhl1 A G 14: 96,280,103 F379S possibly damaging Het
Olfr1448 T A 19: 12,919,566 I248F possibly damaging Het
Pigm C T 1: 172,377,165 S156L probably benign Het
Pikfyve T C 1: 65,238,544 probably null Het
Ppp6r3 A G 19: 3,521,781 F123L probably benign Het
Pum1 C A 4: 130,754,054 S637R probably benign Het
Rp1 A G 1: 4,352,522 S112P probably damaging Het
Serpina3k A T 12: 104,341,036 K176* probably null Het
Smad4 A G 18: 73,641,928 probably benign Het
Tas2r137 T A 6: 40,491,559 F108I probably damaging Het
Tbc1d20 G A 2: 152,308,058 R73H probably damaging Het
Tmem131l T C 3: 83,910,366 probably null Het
Tmem86b A C 7: 4,628,763 probably benign Het
Trav6-4 G A 14: 53,454,780 V115I probably benign Het
Trim37 T G 11: 87,166,649 V303G probably benign Het
Trpc7 C T 13: 56,887,544 R192Q probably benign Het
Ush1g T C 11: 115,318,099 D423G possibly damaging Het
Veph1 T A 3: 66,205,627 D252V possibly damaging Het
Vmn1r181 T G 7: 23,984,553 L148V probably damaging Het
Vmn2r77 T A 7: 86,801,555 H216Q probably benign Het
Zfp39 A G 11: 58,891,330 V202A probably benign Het
Other mutations in Vmn1r42
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02151:Vmn1r42 APN 6 89845041 missense possibly damaging 0.90
IGL02158:Vmn1r42 APN 6 89845314 missense probably damaging 0.96
IGL02731:Vmn1r42 APN 6 89845425 missense probably benign 0.41
IGL02738:Vmn1r42 APN 6 89844648 missense possibly damaging 0.69
IGL02817:Vmn1r42 APN 6 89845536 missense probably damaging 1.00
volkan UTSW 6 89844967 missense probably benign 0.00
R1131:Vmn1r42 UTSW 6 89845569 missense possibly damaging 0.88
R1500:Vmn1r42 UTSW 6 89845501 missense probably benign 0.01
R1557:Vmn1r42 UTSW 6 89844751 missense possibly damaging 0.66
R1561:Vmn1r42 UTSW 6 89845381 missense probably damaging 0.99
R1574:Vmn1r42 UTSW 6 89845077 missense possibly damaging 0.62
R1574:Vmn1r42 UTSW 6 89845381 missense probably damaging 0.99
R1574:Vmn1r42 UTSW 6 89845077 missense possibly damaging 0.62
R1857:Vmn1r42 UTSW 6 89844615 missense probably benign 0.28
R1858:Vmn1r42 UTSW 6 89844615 missense probably benign 0.28
R1916:Vmn1r42 UTSW 6 89844967 missense probably benign 0.00
R2284:Vmn1r42 UTSW 6 89844699 missense probably benign 0.26
R2912:Vmn1r42 UTSW 6 89844706 missense probably benign
R4541:Vmn1r42 UTSW 6 89845551 missense probably benign
R5085:Vmn1r42 UTSW 6 89844616 missense probably benign 0.00
R5384:Vmn1r42 UTSW 6 89845384 missense probably damaging 1.00
R5616:Vmn1r42 UTSW 6 89845102 missense possibly damaging 0.66
R5647:Vmn1r42 UTSW 6 89845332 missense probably benign 0.43
R5867:Vmn1r42 UTSW 6 89844779 nonsense probably null
R6569:Vmn1r42 UTSW 6 89845443 missense probably damaging 1.00
R6852:Vmn1r42 UTSW 6 89844787 missense possibly damaging 0.71
R7054:Vmn1r42 UTSW 6 89845069 missense possibly damaging 0.90
R7399:Vmn1r42 UTSW 6 89845513 missense probably benign 0.27
Posted On2014-05-07