Incidental Mutation 'IGL02067:1700028K03Rik'
ID 185690
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol 1700028K03Rik
Ensembl Gene ENSMUSG00000089798
Gene Name RIKEN cDNA 1700028K03 gene
Synonyms Spo16, SCRE
Accession Numbers
Essential gene? Probably non essential (E-score: 0.146) question?
Stock # IGL02067
Quality Score
Status
Chromosome 5
Chromosomal Location 107682586-107699415 bp(+) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) C to T at 107691816 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Arginine to Stop codon at position 36 (R36*)
Ref Sequence ENSEMBL: ENSMUSP00000124398 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000058921] [ENSMUST00000159902] [ENSMUST00000160160]
AlphaFold no structure available at present
Predicted Effect probably null
Transcript: ENSMUST00000058921
AA Change: R36*
SMART Domains Protein: ENSMUSP00000058373
Gene: ENSMUSG00000089798
AA Change: R36*

DomainStartEndE-ValueType
Pfam:DUF4580 12 173 1.4e-81 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000143074
SMART Domains Protein: ENSMUSP00000122032
Gene: ENSMUSG00000106631

DomainStartEndE-ValueType
low complexity region 116 127 N/A INTRINSIC
low complexity region 364 375 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000159902
AA Change: R36*
SMART Domains Protein: ENSMUSP00000124574
Gene: ENSMUSG00000089798
AA Change: R36*

DomainStartEndE-ValueType
Pfam:DUF4580 10 177 1.4e-80 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000160160
AA Change: R36*
SMART Domains Protein: ENSMUSP00000124398
Gene: ENSMUSG00000106631
AA Change: R36*

DomainStartEndE-ValueType
Pfam:DUF4580 10 140 1.5e-61 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000162591
Predicted Effect noncoding transcript
Transcript: ENSMUST00000163064
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 27 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aplp2 T A 9: 31,062,191 (GRCm39) K688N probably damaging Het
Arhgef28 G T 13: 98,213,825 (GRCm39) Q13K probably damaging Het
Brd8 C T 18: 34,735,780 (GRCm39) S899N probably damaging Het
Chrna6 A G 8: 27,894,424 (GRCm39) S494P probably damaging Het
Clcc1 T A 3: 108,576,037 (GRCm39) L195H probably damaging Het
Coq3 A G 4: 21,900,397 (GRCm39) E208G probably benign Het
Dock4 T G 12: 40,884,384 (GRCm39) S1684A probably damaging Het
Duoxa2 G A 2: 122,131,072 (GRCm39) V78M possibly damaging Het
Entrep3 C T 3: 89,095,903 (GRCm39) R545* probably null Het
Fam8a1 G T 13: 46,823,324 (GRCm39) R88L possibly damaging Het
Ganc A G 2: 120,236,785 (GRCm39) D23G probably benign Het
Gm14305 A T 2: 176,411,110 (GRCm39) E53D probably damaging Het
Ing5 T A 1: 93,739,648 (GRCm39) L58Q probably damaging Het
Klrb1-ps1 A G 6: 129,106,351 (GRCm39) D164G probably damaging Het
Lama2 G A 10: 27,052,792 (GRCm39) T1389M probably benign Het
Lrp6 A T 6: 134,457,359 (GRCm39) I815K probably damaging Het
Nek10 A G 14: 14,861,639 (GRCm38) D565G probably benign Het
Opa1 A G 16: 29,435,473 (GRCm39) E641G probably damaging Het
Rbm44 T C 1: 91,080,567 (GRCm39) S252P probably damaging Het
Sbf1 A G 15: 89,173,247 (GRCm39) V1810A probably damaging Het
Sh3pxd2b T C 11: 32,373,095 (GRCm39) V754A probably benign Het
Slc27a6 A G 18: 58,745,263 (GRCm39) T566A probably benign Het
Stxbp6 C T 12: 44,908,081 (GRCm39) R179Q probably damaging Het
Supt6 T A 11: 78,121,983 (GRCm39) Y223F probably benign Het
Tdrd6 T C 17: 43,939,100 (GRCm39) I649M probably damaging Het
Tecrl A T 5: 83,432,122 (GRCm39) C258S probably benign Het
Zfp128 T C 7: 12,618,977 (GRCm39) I74T possibly damaging Het
Other mutations in 1700028K03Rik
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02152:1700028K03Rik APN 5 107,695,983 (GRCm39) missense probably benign 0.05
PIT4618001:1700028K03Rik UTSW 5 107,693,575 (GRCm39) missense probably damaging 1.00
R0519:1700028K03Rik UTSW 5 107,696,067 (GRCm39) missense probably benign 0.34
R2040:1700028K03Rik UTSW 5 107,693,607 (GRCm39) missense probably benign
R2858:1700028K03Rik UTSW 5 107,693,667 (GRCm39) missense probably benign 0.33
R5618:1700028K03Rik UTSW 5 107,696,065 (GRCm39) nonsense probably null
R6408:1700028K03Rik UTSW 5 107,691,858 (GRCm39) missense probably damaging 1.00
R7545:1700028K03Rik UTSW 5 107,696,040 (GRCm39) missense probably damaging 1.00
R7911:1700028K03Rik UTSW 5 107,693,667 (GRCm39) missense probably benign 0.01
R9155:1700028K03Rik UTSW 5 107,691,811 (GRCm39) missense probably damaging 0.97
R9523:1700028K03Rik UTSW 5 107,687,057 (GRCm39) missense possibly damaging 0.90
Posted On 2014-05-07