Incidental Mutation 'IGL02080:Or4k1'
| ID |
186090 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or4k1
|
| Ensembl Gene |
ENSMUSG00000050030 |
| Gene Name |
olfactory receptor family 4 subfamily K member 1 |
| Synonyms |
Olfr728, GA_x6K02T2PMLR-5831021-5830086, MOR246-1P |
| Accession Numbers |
|
| Essential gene? |
Possibly essential
(E-score: 0.512)
|
| Stock # |
IGL02080
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
14 |
| Chromosomal Location |
50377159-50378094 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to T
at 50377579 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Asparagine to Lysine
at position 172
(N172K)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149796
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000051563]
[ENSMUST00000213163]
[ENSMUST00000213685]
[ENSMUST00000215327]
[ENSMUST00000215451]
|
| AlphaFold |
Q7TRM6 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000051563
AA Change: N172K
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| SMART Domains |
Protein: ENSMUSP00000052079
Gene: ENSMUSG00000050030
AA Change: N172K
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
304 |
9.8e-43 |
PFAM |
|
Pfam:7TM_GPCR_Srx
|
31 |
304 |
9.8e-7 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
35 |
297 |
6.5e-9 |
PFAM |
|
Pfam:7tm_1
|
41 |
287 |
1e-18 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000213163
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000213685
AA Change: N172K
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000214046
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000215327
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000215329
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000215451
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000216423
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 30 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Cd33 |
A |
G |
7: 43,178,274 (GRCm39) |
|
probably benign |
Het |
| Cdc45 |
C |
T |
16: 18,617,479 (GRCm39) |
M200I |
probably benign |
Het |
| Csgalnact1 |
C |
A |
8: 68,854,144 (GRCm39) |
G219V |
probably damaging |
Het |
| Dnajc1 |
A |
G |
2: 18,321,159 (GRCm39) |
|
probably benign |
Het |
| Dpysl2 |
A |
T |
14: 67,067,394 (GRCm39) |
D172E |
probably benign |
Het |
| Fbxw28 |
A |
G |
9: 109,168,641 (GRCm39) |
L17P |
probably damaging |
Het |
| Gprin3 |
C |
A |
6: 59,331,176 (GRCm39) |
R377M |
possibly damaging |
Het |
| Hectd4 |
T |
A |
5: 121,504,669 (GRCm39) |
|
probably benign |
Het |
| Kif26a |
G |
T |
12: 112,124,000 (GRCm39) |
A202S |
probably damaging |
Het |
| Lrig2 |
A |
T |
3: 104,371,440 (GRCm39) |
D754E |
probably damaging |
Het |
| Lrit2 |
A |
G |
14: 36,791,031 (GRCm39) |
K237E |
probably damaging |
Het |
| Med13 |
A |
G |
11: 86,174,638 (GRCm39) |
V1729A |
probably damaging |
Het |
| Mon2 |
A |
G |
10: 122,888,095 (GRCm39) |
S100P |
probably damaging |
Het |
| Mrnip |
A |
G |
11: 50,088,502 (GRCm39) |
D166G |
probably benign |
Het |
| Or1s2 |
T |
C |
19: 13,758,846 (GRCm39) |
F288S |
probably damaging |
Het |
| Pkd1l1 |
T |
A |
11: 8,911,345 (GRCm39) |
N311Y |
unknown |
Het |
| Ppara |
A |
G |
15: 85,673,220 (GRCm39) |
D137G |
possibly damaging |
Het |
| Rnf123 |
G |
A |
9: 107,945,501 (GRCm39) |
R390* |
probably null |
Het |
| Scube2 |
A |
G |
7: 109,451,685 (GRCm39) |
F156S |
probably damaging |
Het |
| Setd2 |
T |
G |
9: 110,376,518 (GRCm39) |
|
probably null |
Het |
| Slc24a2 |
A |
G |
4: 87,145,383 (GRCm39) |
C224R |
probably damaging |
Het |
| Snrnp48 |
A |
G |
13: 38,400,466 (GRCm39) |
D191G |
probably damaging |
Het |
| Spo11 |
A |
G |
2: 172,831,188 (GRCm39) |
Y266C |
probably damaging |
Het |
| Tmem144 |
G |
A |
3: 79,730,066 (GRCm39) |
|
probably benign |
Het |
| Tsacc |
A |
T |
3: 88,202,696 (GRCm39) |
|
probably null |
Het |
| Unc5d |
T |
C |
8: 29,381,316 (GRCm39) |
|
probably null |
Het |
| Unc79 |
A |
G |
12: 102,968,234 (GRCm39) |
I153M |
probably damaging |
Het |
| Vgll4 |
A |
G |
6: 114,839,759 (GRCm39) |
C178R |
probably damaging |
Het |
| Vmn2r90 |
T |
A |
17: 17,933,120 (GRCm39) |
S227T |
probably damaging |
Het |
| Zfp518a |
G |
A |
19: 40,903,061 (GRCm39) |
G997R |
probably damaging |
Het |
|
| Other mutations in Or4k1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01101:Or4k1
|
APN |
14 |
50,377,511 (GRCm39) |
missense |
probably benign |
0.06 |
|
IGL03187:Or4k1
|
APN |
14 |
50,377,257 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1613:Or4k1
|
UTSW |
14 |
50,377,751 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1671:Or4k1
|
UTSW |
14 |
50,377,290 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1876:Or4k1
|
UTSW |
14 |
50,377,629 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R2085:Or4k1
|
UTSW |
14 |
50,377,580 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2086:Or4k1
|
UTSW |
14 |
50,377,580 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2158:Or4k1
|
UTSW |
14 |
50,377,580 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2226:Or4k1
|
UTSW |
14 |
50,378,076 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2516:Or4k1
|
UTSW |
14 |
50,377,440 (GRCm39) |
missense |
probably benign |
|
|
R4454:Or4k1
|
UTSW |
14 |
50,377,953 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4714:Or4k1
|
UTSW |
14 |
50,377,436 (GRCm39) |
missense |
possibly damaging |
0.55 |
|
R4754:Or4k1
|
UTSW |
14 |
50,377,491 (GRCm39) |
missense |
probably benign |
0.02 |
|
R4754:Or4k1
|
UTSW |
14 |
50,377,490 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R5275:Or4k1
|
UTSW |
14 |
50,377,953 (GRCm39) |
missense |
probably benign |
0.35 |
|
R5339:Or4k1
|
UTSW |
14 |
50,377,759 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R6614:Or4k1
|
UTSW |
14 |
50,377,821 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6713:Or4k1
|
UTSW |
14 |
50,377,181 (GRCm39) |
missense |
probably benign |
|
|
R6900:Or4k1
|
UTSW |
14 |
50,377,295 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R7062:Or4k1
|
UTSW |
14 |
50,377,907 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7192:Or4k1
|
UTSW |
14 |
50,377,577 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
R7528:Or4k1
|
UTSW |
14 |
50,377,277 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R7740:Or4k1
|
UTSW |
14 |
50,377,803 (GRCm39) |
missense |
probably benign |
0.05 |
|
R9198:Or4k1
|
UTSW |
14 |
50,377,990 (GRCm39) |
nonsense |
probably null |
|
|
R9215:Or4k1
|
UTSW |
14 |
50,377,829 (GRCm39) |
missense |
probably benign |
|
|
R9380:Or4k1
|
UTSW |
14 |
50,377,770 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Posted On |
2014-05-07 |
Incidental Mutation