Mutagenetix > Incidental Mutations

Incidental Mutation 'R1680:Zp3r'

188384

Institutional Source

Beutler Lab

Gene Symbol

Zp3r

Ensembl Gene

ENSMUSG00000042554

Gene Name

zona pellucida 3 receptor

Synonyms

SP56

MMRRC Submission

039716-MU

Accession Numbers

Is this an essential gene?

Probably non essential (E-score: 0.103) question?

Stock #

R1680 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

130576713-130629621 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 130582880 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Asparagine to Lysine at position 433 (N433K)

Ref Sequence

ENSEMBL: ENSMUSP00000045443 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000039862] [ENSMUST00000128128] [ENSMUST00000142416]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000039862
AA Change: N433K

PolyPhen 2 Score 0.150 (Sensitivity: 0.92; Specificity: 0.87)

SMART Domains

Protein: ENSMUSP00000045443
Gene: ENSMUSG00000042554
AA Change: N433K

Domain	Start	End	E-Value	Type
signal peptide	1	32	N/A	INTRINSIC
CCP	34	91	2.52e-7	SMART
CCP	96	153	3.17e-13	SMART
CCP	158	218	8.23e-12	SMART
CCP	223	278	1.77e-11	SMART
CCP	283	345	5.32e-6	SMART
CCP	350	411	3.67e-9	SMART
CCP	456	509	6.95e-10	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000128128
AA Change: N389K

PolyPhen 2 Score 0.015 (Sensitivity: 0.96; Specificity: 0.79)

SMART Domains

Protein: ENSMUSP00000114401
Gene: ENSMUSG00000042554
AA Change: N389K

Domain	Start	End	E-Value	Type
CCP	55	112	2.52e-7	SMART
CCP	117	174	3.17e-13	SMART
CCP	179	234	1.77e-11	SMART
CCP	239	301	5.32e-6	SMART
CCP	306	367	3.67e-9	SMART
CCP	412	465	6.95e-10	SMART
PDB:4B0F\|G	468	513	8e-8	PDB

Predicted Effect

probably benign
Transcript: ENSMUST00000142416
AA Change: N368K

PolyPhen 2 Score 0.015 (Sensitivity: 0.96; Specificity: 0.79)

SMART Domains

Protein: ENSMUSP00000118784
Gene: ENSMUSG00000042554
AA Change: N368K

Domain	Start	End	E-Value	Type
signal peptide	1	32	N/A	INTRINSIC
CCP	34	91	2.52e-7	SMART
CCP	96	153	3.17e-13	SMART
CCP	158	213	1.77e-11	SMART
CCP	218	280	5.32e-6	SMART
CCP	285	346	3.67e-9	SMART
CCP	391	444	6.95e-10	SMART
PDB:4B0F\|G	447	492	8e-8	PDB

Coding Region Coverage

1x: 99.1%
3x: 98.4%
10x: 96.6%
20x: 93.4%

Validation Efficiency

MGI Phenotype

PHENOTYPE: Mice homozygous for a knock-out allele exhibit normal fertility and sperm morphology and physiology. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 68 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700017N19Rik	C	G	10: 100,603,528	P187R	probably damaging	Het
Ahnak	T	A	19: 9,009,963	H2870Q	probably benign	Het
Arhgef33	C	T	17: 80,347,651	S95F	probably damaging	Het
Atp1a2	T	A	1: 172,278,954	D827V	probably damaging	Het
Bcat1	T	G	6: 145,039,628	D96A	probably damaging	Het
Birc6	A	T	17: 74,548,746	I184L	probably benign	Het
Ccdc129	C	T	6: 55,968,766	T824I	probably damaging	Het
Clca3b	A	T	3: 144,837,824	L415M	probably damaging	Het
Clstn1	T	C	4: 149,643,726	V617A	probably benign	Het
Col22a1	G	A	15: 71,799,361	A1050V	unknown	Het
Col5a3	C	T	9: 20,784,668		probably null	Het
Csmd3	G	A	15: 47,741,170	T1059I	probably damaging	Het
Dclk2	C	T	3: 86,805,639	R503Q	possibly damaging	Het
Dnm3	A	G	1: 162,010,976	V272A	probably benign	Het
Dnmt3a	A	G	12: 3,873,361	Q187R	probably damaging	Het
Dpp9	A	G	17: 56,190,103	Y710H	probably benign	Het
Eef1a2	A	T	2: 181,152,941	M155K	possibly damaging	Het
Entpd8	G	A	2: 25,084,024	C331Y	probably damaging	Het
Erc1	A	C	6: 119,575,761	L1072R	probably damaging	Het
Fam160b2	T	C	14: 70,586,851	Y482C	probably damaging	Het
Gtf3c2	A	G	5: 31,173,868	S155P	probably damaging	Het
Gucy2c	A	G	6: 136,722,493	S617P	probably damaging	Het
Ice1	T	C	13: 70,605,448	R840G	probably benign	Het
Il1rl2	T	C	1: 40,351,793	Y299H	possibly damaging	Het
Ints7	T	G	1: 191,621,162		probably null	Het
Ireb2	C	T	9: 54,881,518	T92I	probably damaging	Het
Kcnj8	A	T	6: 142,570,189	L64*	probably null	Het
Mapk8ip3	A	G	17: 24,901,011	V983A	probably damaging	Het
Mertk	A	G	2: 128,801,636	D985G	probably benign	Het
Mical3	A	T	6: 120,959,643	S1307R	probably benign	Het
Ncaph2	A	G	15: 89,364,622	D222G	probably benign	Het
Nf1	C	A	11: 79,550,998	S295*	probably null	Het
Nlrp12	T	A	7: 3,241,174	D236V	probably damaging	Het
Npnt	A	G	3: 132,906,802	V74A	probably benign	Het
Oasl1	A	G	5: 114,935,944	D304G	probably damaging	Het
Olfr1098	C	T	2: 86,923,161	V124I	probably benign	Het
Olfr556	A	G	7: 102,670,733	D271G	possibly damaging	Het
Olfr834	A	G	9: 18,988,516	H176R	possibly damaging	Het
Olfr936	T	C	9: 39,047,000	I140V	probably benign	Het
Patz1	A	G	11: 3,307,812	K604E	probably damaging	Het
Pcsk6	T	A	7: 66,035,250	V793E	probably benign	Het
Pla2g4d	C	T	2: 120,277,750		probably null	Het
Plxnc1	A	C	10: 94,841,551	L938R	probably benign	Het
Pou4f2	G	T	8: 78,434,831	A381D	probably damaging	Het
Prdm4	A	G	10: 85,899,223	L685P	possibly damaging	Het
Pxn	T	A	5: 115,552,147	V383E	probably damaging	Het
Rbl1	A	G	2: 157,174,783	L632P	probably damaging	Het
Rnf135	T	A	11: 80,196,881	S219T	possibly damaging	Het
Sdk2	T	C	11: 113,791,436	D2039G	possibly damaging	Het
Sdk2	C	T	11: 113,838,646		silent	Het
Slc5a6	A	G	5: 31,042,644	Y131H	probably damaging	Het
Slc9a1	T	C	4: 133,418,080	I492T	probably damaging	Het
Soga3	A	T	10: 29,196,839	Q709L	probably damaging	Het
Spag5	A	G	11: 78,320,616	K993E	probably damaging	Het
Sptbn1	T	G	11: 30,159,371	I75L	possibly damaging	Het
Syngap1	T	C	17: 26,952,579	S46P	possibly damaging	Het
Tfcp2l1	T	A	1: 118,675,605	F458I	probably damaging	Het
Tmem67	A	G	4: 12,087,840	V102A	probably benign	Het
Tomm70a	T	C	16: 57,121,961	S34P	unknown	Het
Txlnb	G	T	10: 17,843,233	G604V	probably benign	Het
Ube2q1	A	G	3: 89,776,176	T143A	probably benign	Het
Unc80	C	T	1: 66,503,669	R361*	probably null	Het
Vcan	T	C	13: 89,703,547	D1098G	probably benign	Het
Vmn1r176	T	A	7: 23,835,381	T116S	probably damaging	Het
Wdr81	C	T	11: 75,454,423	R6K	probably benign	Het
Zan	T	A	5: 137,403,050	T4136S	unknown	Het
Zbtb14	C	A	17: 69,388,502	F398L	probably damaging	Het
Zfp606	A	T	7: 12,493,971	H615L	probably damaging	Het

Other mutations in Zp3r

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01352:Zp3r	APN	1	130619356	missense	possibly damaging	0.88
IGL01783:Zp3r	APN	1	130598866	missense	possibly damaging	0.72
IGL01820:Zp3r	APN	1	130598920	missense	probably benign	0.01
IGL01959:Zp3r	APN	1	130591451	nonsense	probably null
IGL01978:Zp3r	APN	1	130598941	missense	probably damaging	1.00
IGL02232:Zp3r	APN	1	130596667	missense	probably damaging	1.00
IGL02290:Zp3r	APN	1	130619365	missense	possibly damaging	0.89
IGL02878:Zp3r	APN	1	130582851	missense	probably benign	0.02
IGL02960:Zp3r	APN	1	130583438	missense	possibly damaging	0.67
BB006:Zp3r	UTSW	1	130591480	missense	probably benign	0.31
BB016:Zp3r	UTSW	1	130591480	missense	probably benign	0.31
PIT4403001:Zp3r	UTSW	1	130582872	missense	possibly damaging	0.93
R0433:Zp3r	UTSW	1	130577133	splice site	probably benign
R0491:Zp3r	UTSW	1	130618334	missense	probably damaging	1.00
R0781:Zp3r	UTSW	1	130577884	critical splice donor site	probably null
R1110:Zp3r	UTSW	1	130577884	critical splice donor site	probably null
R1126:Zp3r	UTSW	1	130618342	missense	probably damaging	1.00
R1295:Zp3r	UTSW	1	130591444	missense	probably damaging	1.00
R1728:Zp3r	UTSW	1	130596814	missense	probably benign	0.00
R1728:Zp3r	UTSW	1	130619414	missense	possibly damaging	0.68
R1729:Zp3r	UTSW	1	130596814	missense	probably benign	0.00
R1729:Zp3r	UTSW	1	130619414	missense	possibly damaging	0.68
R1730:Zp3r	UTSW	1	130596814	missense	probably benign	0.00
R1730:Zp3r	UTSW	1	130619414	missense	possibly damaging	0.68
R1739:Zp3r	UTSW	1	130596814	missense	probably benign	0.00
R1739:Zp3r	UTSW	1	130619414	missense	possibly damaging	0.68
R1762:Zp3r	UTSW	1	130596814	missense	probably benign	0.00
R1762:Zp3r	UTSW	1	130619414	missense	possibly damaging	0.68
R1783:Zp3r	UTSW	1	130596814	missense	probably benign	0.00
R1783:Zp3r	UTSW	1	130619414	missense	possibly damaging	0.68
R1784:Zp3r	UTSW	1	130596814	missense	probably benign	0.00
R1784:Zp3r	UTSW	1	130619414	missense	possibly damaging	0.68
R1785:Zp3r	UTSW	1	130596814	missense	probably benign	0.00
R1785:Zp3r	UTSW	1	130619414	missense	possibly damaging	0.68
R3942:Zp3r	UTSW	1	130577054	missense	possibly damaging	0.94
R4429:Zp3r	UTSW	1	130591391	missense	possibly damaging	0.95
R4571:Zp3r	UTSW	1	130578020	missense	probably damaging	1.00
R4626:Zp3r	UTSW	1	130615175	missense	probably damaging	1.00
R4647:Zp3r	UTSW	1	130577960	missense	probably damaging	1.00
R4790:Zp3r	UTSW	1	130582892	missense	probably damaging	1.00
R4815:Zp3r	UTSW	1	130598912	missense	probably damaging	1.00
R5355:Zp3r	UTSW	1	130596781	missense	probably benign	0.09
R5554:Zp3r	UTSW	1	130583471	missense	probably benign	0.42
R5629:Zp3r	UTSW	1	130582879	missense	probably damaging	0.99
R6154:Zp3r	UTSW	1	130598905	missense	probably damaging	1.00
R6173:Zp3r	UTSW	1	130591568	splice site	probably null
R6949:Zp3r	UTSW	1	130577895	missense	probably benign	0.00
R7346:Zp3r	UTSW	1	130583480	missense	probably benign	0.02
R7399:Zp3r	UTSW	1	130577053	missense	probably damaging	0.98
R7929:Zp3r	UTSW	1	130591480	missense	probably benign	0.31
R7944:Zp3r	UTSW	1	130596823	missense	probably damaging	1.00
R7945:Zp3r	UTSW	1	130596823	missense	probably damaging	1.00
R8367:Zp3r	UTSW	1	130598873	missense	probably damaging	1.00
R8742:Zp3r	UTSW	1	130583493	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TCCAAGCTATGCAAGTGCTGACTG -3'
(R):5'- AGCTTTTGCCAGGGGACATAACAC -3'

Sequencing Primer
(F):5'- CCTCAGAGCAGAGATAAGTAACTTC -3'
(R):5'- TATTTGTCCATCCAGGGGGAAAG -3'

Posted On

2014-05-09