Mutagenetix > Incidental Mutations

Incidental Mutation 'R1687:Mzf1'

189418

Institutional Source

Beutler Lab

Gene Symbol

Mzf1

Ensembl Gene

ENSMUSG00000030380

Gene Name

myeloid zinc finger 1

Synonyms

Znf42, Zfp121, Zfp98, Mzf2

MMRRC Submission

039720-MU

Accession Numbers

Is this an essential gene?

Probably non essential (E-score: 0.170) question?

Stock #

R1687 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

13042303-13054764 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

C to A at 13052771 bp

Zygosity

Heterozygous

Amino Acid Change

Arginine to Leucine at position 124 (R124L)

Ref Sequence

ENSEMBL: ENSMUSP00000138163 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000069289] [ENSMUST00000182087] [ENSMUST00000182490] [ENSMUST00000182515]

Predicted Effect

possibly damaging
Transcript: ENSMUST00000069289
AA Change: R124L

PolyPhen 2 Score 0.711 (Sensitivity: 0.86; Specificity: 0.92)

SMART Domains

Protein: ENSMUSP00000069122
Gene: ENSMUSG00000030380
AA Change: R124L

Domain	Start	End	E-Value	Type
low complexity region	24	34	N/A	INTRINSIC
SCAN	41	153	1.18e-70	SMART
ZnF_C2H2	357	379	4.87e-4	SMART
ZnF_C2H2	385	407	1.95e-3	SMART
ZnF_C2H2	413	435	1.18e-2	SMART
ZnF_C2H2	441	463	8.6e-5	SMART
ZnF_C2H2	486	508	1.79e-2	SMART
ZnF_C2H2	514	536	7.15e-2	SMART
ZnF_C2H2	542	564	8.47e-4	SMART
ZnF_C2H2	570	592	2.79e-4	SMART
ZnF_C2H2	598	620	1.6e-4	SMART
ZnF_C2H2	626	648	1.67e-2	SMART
ZnF_C2H2	654	676	3.44e-4	SMART
ZnF_C2H2	682	704	2.84e-5	SMART
ZnF_C2H2	710	732	2.4e-3	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000182087
AA Change: R124L

PolyPhen 2 Score 0.817 (Sensitivity: 0.84; Specificity: 0.93)

SMART Domains

Protein: ENSMUSP00000138163
Gene: ENSMUSG00000030380
AA Change: R124L

Domain	Start	End	E-Value	Type
low complexity region	24	34	N/A	INTRINSIC
SCAN	41	152	9.06e-58	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000182293

Predicted Effect

possibly damaging
Transcript: ENSMUST00000182490
AA Change: R203L

PolyPhen 2 Score 0.728 (Sensitivity: 0.86; Specificity: 0.92)

SMART Domains

Protein: ENSMUSP00000138271
Gene: ENSMUSG00000030380
AA Change: R203L

Domain	Start	End	E-Value	Type
low complexity region	103	113	N/A	INTRINSIC
SCAN	120	232	1.18e-70	SMART
ZnF_C2H2	436	458	4.87e-4	SMART
ZnF_C2H2	464	486	1.95e-3	SMART
ZnF_C2H2	492	514	1.18e-2	SMART
ZnF_C2H2	520	542	8.6e-5	SMART
ZnF_C2H2	565	587	1.79e-2	SMART
ZnF_C2H2	593	615	7.15e-2	SMART
ZnF_C2H2	621	643	8.47e-4	SMART
ZnF_C2H2	649	671	2.79e-4	SMART
ZnF_C2H2	677	699	1.6e-4	SMART
ZnF_C2H2	705	727	1.67e-2	SMART
ZnF_C2H2	733	755	3.44e-4	SMART
ZnF_C2H2	761	783	2.84e-5	SMART
ZnF_C2H2	789	811	2.4e-3	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000182515
AA Change: R124L

PolyPhen 2 Score 0.711 (Sensitivity: 0.86; Specificity: 0.92)

SMART Domains

Protein: ENSMUSP00000138387
Gene: ENSMUSG00000030380
AA Change: R124L

Domain	Start	End	E-Value	Type
low complexity region	24	34	N/A	INTRINSIC
SCAN	41	153	1.18e-70	SMART
ZnF_C2H2	357	379	4.87e-4	SMART
ZnF_C2H2	385	407	1.95e-3	SMART
ZnF_C2H2	413	435	1.18e-2	SMART
ZnF_C2H2	441	463	8.6e-5	SMART
ZnF_C2H2	486	508	1.79e-2	SMART
ZnF_C2H2	514	536	7.15e-2	SMART
ZnF_C2H2	542	564	8.47e-4	SMART
ZnF_C2H2	570	592	2.79e-4	SMART
ZnF_C2H2	598	620	1.6e-4	SMART
ZnF_C2H2	626	648	1.67e-2	SMART
ZnF_C2H2	654	676	3.44e-4	SMART
ZnF_C2H2	682	704	2.84e-5	SMART
ZnF_C2H2	710	732	2.4e-3	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000183176

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000210727

Meta Mutation Damage Score

0.1109

Coding Region Coverage

1x: 99.2%
3x: 98.5%
10x: 96.7%
20x: 93.8%

Validation Efficiency

MGI Phenotype

PHENOTYPE: Homozygous mutants are prone to late-onset (>2 yr) neoplasias characterized by infiltration, enlargement and disruption of the liver by monomorphic cells of myeloid origin; hemopoietic progenitors show increased ability to sustain long-term hemopoiesis. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 70 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca5	A	T	11: 110,293,888	F931I	probably benign	Het
Alox15	T	A	11: 70,349,918	H212L	probably benign	Het
Arhgap42	A	T	9: 9,035,537	V268D	probably benign	Het
Armc9	A	G	1: 86,156,955	M1V	probably null	Het
BB287469	A	G	12: 87,819,718	D133G	unknown	Het
Brca1	C	T	11: 101,489,840	C1789Y	probably benign	Het
Cacng4	A	G	11: 107,736,759	V138A	probably benign	Het
Camsap1	A	G	2: 25,939,615	F699S	probably damaging	Het
Ccm2	A	G	11: 6,585,118	R67G	probably damaging	Het
Cdk16	G	A	X: 20,696,659		probably null	Het
Cep85	T	C	4: 134,148,013	H546R	probably benign	Het
Cfap54	T	C	10: 92,932,640	D207G	probably damaging	Het
Cldn9	G	T	17: 23,683,076	R192S	probably benign	Het
Crybb3	A	G	5: 113,079,767	S63P	probably damaging	Het
Cux1	A	G	5: 136,312,669	L615P	probably damaging	Het
Dctn3	A	G	4: 41,715,407	Y154H	probably damaging	Het
Depdc5	CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	5: 32,910,407		probably benign	Het
Dnah3	A	T	7: 120,045,786		probably null	Het
Eml6	G	A	11: 29,833,187	H565Y	probably damaging	Het
Ephb6	T	C	6: 41,617,366	V610A	probably benign	Het
Fam234a	T	C	17: 26,215,308	Y333C	probably damaging	Het
Fbln1	G	A	15: 85,227,106	V154I	probably benign	Het
Frem2	A	T	3: 53,653,952	W1045R	probably benign	Het
Fubp1	A	G	3: 152,228,201		probably benign	Het
Gja3	T	A	14: 57,036,876	N13I	probably damaging	Het
Gpr20	C	A	15: 73,695,902	V213L	probably benign	Het
Grk5	T	C	19: 61,076,783	I295T	probably damaging	Het
Gucy1b1	A	G	3: 82,038,042	F430L	probably damaging	Het
Gzmk	T	A	13: 113,173,928	I119L	probably benign	Het
Hadh	T	C	3: 131,245,249	I153V	probably benign	Het
Hsfy2	T	C	1: 56,636,853	Y175C	probably damaging	Het
Hspa5	T	C	2: 34,775,824	I560T	probably benign	Het
Igdcc4	T	C	9: 65,131,663	V863A	probably damaging	Het
Il22ra2	A	G	10: 19,632,872	D216G	probably benign	Het
Klc2	G	A	19: 5,111,654	P303S	probably damaging	Het
Lama5	C	T	2: 180,194,066	V1192I	probably benign	Het
Mon2	A	G	10: 123,026,124	S772P	probably damaging	Het
Mphosph8	T	A	14: 56,672,478	L96Q	probably damaging	Het
Nckap1	A	G	2: 80,520,585	I726T	probably damaging	Het
Ndnf	A	T	6: 65,703,423	T229S	probably benign	Het
Npas3	A	T	12: 54,048,875		probably null	Het
Nrap	C	T	19: 56,355,529	E729K	probably damaging	Het
Nsun2	T	A	13: 69,627,597	F387I	probably damaging	Het
Olfr743	T	C	14: 50,533,702	S97P	possibly damaging	Het
Pabpc1l	C	T	2: 164,044,306	T452M	probably benign	Het
Pcdh10	T	C	3: 45,380,015	Y255H	probably damaging	Het
Pdcd6ip	A	T	9: 113,700,019	Y72N	probably damaging	Het
Pglyrp1	A	T	7: 18,884,704		probably benign	Het
Pkp2	T	C	16: 16,268,709		probably null	Het
Ppard	A	G	17: 28,297,180	Y126C	probably damaging	Het
Prkcq	T	C	2: 11,290,533	Y598H	probably damaging	Het
Rhobtb1	A	G	10: 69,270,279	T287A	probably damaging	Het
Sema4b	T	C	7: 80,219,262	Y361H	probably damaging	Het
Slfn9	A	T	11: 82,982,157	I640N	probably damaging	Het
Smurf2	C	A	11: 106,836,070		probably null	Het
Spag5	T	C	11: 78,304,929	V354A	probably benign	Het
Sptb	T	C	12: 76,603,699	D1748G	possibly damaging	Het
St6galnac5	C	A	3: 152,981,250	L22F	probably benign	Het
Sugp2	T	C	8: 70,242,634	S86P	probably damaging	Het
Tnk1	T	C	11: 69,856,473	I111V	possibly damaging	Het
Tnni3k	T	A	3: 154,939,626	I541F	possibly damaging	Het
Trim36	G	T	18: 46,188,657	H108N	possibly damaging	Het
Ttn	T	C	2: 76,870,907		probably benign	Het
Usp28	T	A	9: 49,024,017	S89R	probably benign	Het
Vmn2r121	T	C	X: 124,132,791	D223G	probably benign	Het
Vmn2r65	T	A	7: 84,940,818	Y630F	probably benign	Het
Washc2	T	A	6: 116,256,712	S900T	probably benign	Het
Wdr72	A	G	9: 74,210,199	N731S	probably benign	Het
Xrra1	T	A	7: 99,876,244	F123L	probably damaging	Het
Zfp648	A	G	1: 154,204,242	D49G	probably benign	Het

Other mutations in Mzf1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00418:Mzf1	APN	7	13044616	missense	possibly damaging	0.85
IGL01728:Mzf1	APN	7	13051727	splice site	probably benign
IGL02194:Mzf1	APN	7	13043720	missense	possibly damaging	0.53
IGL02256:Mzf1	APN	7	13052737	splice site	probably benign
IGL02584:Mzf1	APN	7	13052817	missense	probably damaging	0.98
IGL02678:Mzf1	APN	7	13052909	missense	possibly damaging	0.51
R0903:Mzf1	UTSW	7	13052771	missense	possibly damaging	0.82
R0904:Mzf1	UTSW	7	13052771	missense	possibly damaging	0.82
R0905:Mzf1	UTSW	7	13052771	missense	possibly damaging	0.82
R1128:Mzf1	UTSW	7	13052771	missense	possibly damaging	0.82
R1131:Mzf1	UTSW	7	13052771	missense	possibly damaging	0.82
R1280:Mzf1	UTSW	7	13053083	missense	probably damaging	0.96
R1400:Mzf1	UTSW	7	13052771	missense	possibly damaging	0.82
R1640:Mzf1	UTSW	7	13043270	makesense	probably null
R4014:Mzf1	UTSW	7	13043956	missense	possibly damaging	0.47
R4721:Mzf1	UTSW	7	13043296	missense	possibly damaging	0.52
R4721:Mzf1	UTSW	7	13043521	missense	possibly damaging	0.53
R5511:Mzf1	UTSW	7	13051599	missense	possibly damaging	0.95
R5611:Mzf1	UTSW	7	13044627	utr 3 prime	probably benign
R5728:Mzf1	UTSW	7	13044058	missense	probably benign	0.00
R5868:Mzf1	UTSW	7	13053189	missense	probably benign	0.00
R6283:Mzf1	UTSW	7	13053369	intron	probably benign
R7059:Mzf1	UTSW	7	13053058	missense	probably damaging	0.96
R7066:Mzf1	UTSW	7	13043563	missense	possibly damaging	0.92
R7763:Mzf1	UTSW	7	13044091	missense	probably damaging	1.00
R8157:Mzf1	UTSW	7	13044352	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GTCATCCAAAGTCCTGAACTTCCCC -3'
(R):5'- GCTACGCCCAGAAGTACATTCCAAG -3'

Sequencing Primer
(F):5'- CTCTTTTGACCTTGAGCAGAAAGC -3'
(R):5'- TACATTCCAAGGAACAGGTGC -3'

Posted On

2014-05-14