Mutagenetix > Incidental Mutation

Incidental Mutation 'R1765:Adgrl4'

194265

Institutional Source

Beutler Lab

Gene Symbol

Adgrl4

Ensembl Gene

ENSMUSG00000039167

Gene Name

adhesion G protein-coupled receptor L4

Synonyms

EGF-TM7 receptor, Eltd1, 1110033N21Rik, Etl

MMRRC Submission

039797-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R1765 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

151143519-151250718 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 151248872 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Threonine at position 720 (I720T)

Ref Sequence

ENSEMBL: ENSMUSP00000041939 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000046977]

AlphaFold

Q923X1

Predicted Effect

probably damaging
Transcript: ENSMUST00000046977
AA Change: I720T

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000041939
Gene: ENSMUSG00000039167
AA Change: I720T

Domain	Start	End	E-Value	Type
EGF	21	57	9.13e0	SMART
EGF_CA	58	107	4.88e-9	SMART
EGF_CA	108	157	4.88e-9	SMART
Pfam:GAIN	182	390	6.8e-38	PFAM
GPS	414	467	1.25e-17	SMART
Pfam:7tm_2	473	709	2.5e-58	PFAM

Meta Mutation Damage Score

0.5967

Coding Region Coverage

1x: 97.5%
3x: 96.8%
10x: 95.1%
20x: 91.8%

Validation Efficiency

99% (90/91)

MGI Phenotype

PHENOTYPE: For a targeted mutation, no significant differences were detected between homozygous mice and controls in a high-throughput screen. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 87 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4933412E24Rik	G	T	15: 59,887,194 (GRCm39)	C415*	probably null	Het
Adamtsl2	A	C	2: 26,992,842 (GRCm39)	I652L	probably benign	Het
Agrn	A	T	4: 156,261,284 (GRCm39)	C604*	probably null	Het
Amh	AGCGCCTTGG	AG	10: 80,641,419 (GRCm39)		probably null	Het
B3galt2	C	A	1: 143,522,207 (GRCm39)	N114K	probably benign	Het
Bud23	A	T	5: 135,084,897 (GRCm39)	M59K	probably benign	Het
C3	C	T	17: 57,531,401 (GRCm39)		probably null	Het
C9orf72	A	C	4: 35,197,098 (GRCm39)	H322Q	probably damaging	Het
Cc2d2a	A	T	5: 43,871,873 (GRCm39)	D903V	probably damaging	Het
Ccdc9b	G	A	2: 118,591,128 (GRCm39)	A135V	probably benign	Het
Cd84	A	G	1: 171,700,317 (GRCm39)	T145A	possibly damaging	Het
Cdan1	A	C	2: 120,551,230 (GRCm39)	L1097V	probably damaging	Het
Cdc26	T	A	4: 62,313,155 (GRCm39)	N62I	probably benign	Het
Cdc27	G	T	11: 104,425,607 (GRCm39)	Q70K	probably damaging	Het
Cenpq	A	T	17: 41,235,178 (GRCm39)		probably null	Het
Cep295	T	C	9: 15,239,200 (GRCm39)	S1858G	probably damaging	Het
Clasp1	T	C	1: 118,433,261 (GRCm39)	S247P	probably damaging	Het
Cyp2w1	C	T	5: 139,339,623 (GRCm39)	T71I	probably damaging	Het
Dcaf1	T	C	9: 106,741,793 (GRCm39)	F1336S	probably damaging	Het
Dennd6b	G	A	15: 89,074,506 (GRCm39)	Q104*	probably null	Het
Dglucy	T	A	12: 100,816,361 (GRCm39)		probably null	Het
Dnajc9	A	G	14: 20,438,158 (GRCm39)	V148A	possibly damaging	Het
Dnmbp	T	A	19: 43,890,579 (GRCm39)	D396V	possibly damaging	Het
Dock10	T	A	1: 80,583,540 (GRCm39)	I221F	probably damaging	Het
Dscam	T	C	16: 96,486,579 (GRCm39)	N1032S	probably benign	Het
Dsg4	A	C	18: 20,589,888 (GRCm39)	Y346S	probably benign	Het
Dync1i2	A	G	2: 71,079,759 (GRCm39)	H417R	probably benign	Het
Dysf	G	A	6: 84,167,884 (GRCm39)		probably null	Het
Elovl1	A	G	4: 118,287,707 (GRCm39)	M1V	probably null	Het
Eva1c	A	G	16: 90,701,135 (GRCm39)	S257G	probably benign	Het
Eya2	A	T	2: 165,566,723 (GRCm39)	D258V	probably damaging	Het
Fam193a	A	G	5: 34,593,841 (GRCm39)	T113A	probably damaging	Het
Fbxw15	G	A	9: 109,387,314 (GRCm39)	S227F	probably damaging	Het
Fstl5	G	T	3: 76,500,783 (GRCm39)	R404L	possibly damaging	Het
Glud1	T	C	14: 34,047,541 (GRCm39)		probably benign	Het
Gm10770	A	C	2: 150,021,258 (GRCm39)	H86Q	probably damaging	Het
Gzme	C	T	14: 56,355,871 (GRCm39)	G147D	probably damaging	Het
Herc3	T	C	6: 58,865,645 (GRCm39)	V746A	probably damaging	Het
Hmga1	A	G	17: 27,778,592 (GRCm39)	E17G	probably damaging	Het
Kdelr2	A	T	5: 143,406,567 (GRCm39)	K206*	probably null	Het
Kng2	A	G	16: 22,806,993 (GRCm39)		probably null	Het
Lrrc41	G	A	4: 115,946,248 (GRCm39)	R321H	possibly damaging	Het
Mapkapk2	A	T	1: 130,986,498 (GRCm39)	M1K	probably null	Het
Me2	A	G	18: 73,924,929 (GRCm39)	F263L	probably damaging	Het
Mkks	A	G	2: 136,722,287 (GRCm39)	L290P	probably damaging	Het
Mmp12	T	A	9: 7,354,772 (GRCm39)	I255N	probably damaging	Het
Mogs	A	G	6: 83,093,784 (GRCm39)	D251G	probably benign	Het
Morf4l1	T	A	9: 89,984,401 (GRCm39)	Y65F	possibly damaging	Het
Neb	T	C	2: 52,094,676 (GRCm39)	D5169G	probably damaging	Het
Nin	A	G	12: 70,089,665 (GRCm39)	L1250P	probably damaging	Het
Nomo1	G	T	7: 45,715,717 (GRCm39)	G721V	possibly damaging	Het
Notch2	T	G	3: 98,029,242 (GRCm39)	C1002G	probably damaging	Het
Npat	T	C	9: 53,481,522 (GRCm39)	Y1077H	probably benign	Het
Or1e1c	T	A	11: 73,266,170 (GRCm39)	N198K	probably damaging	Het
Or4g17	G	A	2: 111,209,491 (GRCm39)	V49I	probably benign	Het
Or4p21	A	T	2: 88,276,367 (GRCm39)	F305Y	probably damaging	Het
Or5h25	A	G	16: 58,930,118 (GRCm39)	L285P	probably damaging	Het
Or8c16	T	C	9: 38,130,548 (GRCm39)	I143T	probably benign	Het
Otop2	A	T	11: 115,215,504 (GRCm39)	I142F	probably benign	Het
Pacsin3	A	G	2: 91,093,460 (GRCm39)	E279G	possibly damaging	Het
Pafah2	A	G	4: 134,140,758 (GRCm39)	T243A	probably benign	Het
Pcdhgc5	A	G	18: 37,954,913 (GRCm39)	H729R	probably benign	Het
Plcd1	T	C	9: 118,900,874 (GRCm39)	D756G	probably damaging	Het
Prune2	A	G	19: 17,102,962 (GRCm39)	E2707G	probably damaging	Het
Rit2	C	T	18: 31,449,951 (GRCm39)	G16S	probably damaging	Het
Sec24c	A	G	14: 20,738,922 (GRCm39)		probably benign	Het
Skint5	G	T	4: 113,434,858 (GRCm39)	T1037K	unknown	Het
Slc28a2	T	A	2: 122,290,876 (GRCm39)		probably null	Het
Slc41a2	G	A	10: 83,137,130 (GRCm39)	A259V	probably damaging	Het
Slc6a17	T	A	3: 107,380,895 (GRCm39)	I537F	possibly damaging	Het
Slco1a7	T	C	6: 141,700,084 (GRCm39)		probably benign	Het
Smchd1	A	T	17: 71,707,196 (GRCm39)		probably benign	Het
Smg1	T	C	7: 117,738,938 (GRCm39)	I3489V	probably benign	Het
Sytl3	T	C	17: 6,967,082 (GRCm39)	L142P	probably damaging	Het
Tektl1	A	T	10: 78,584,502 (GRCm39)	M340K	probably benign	Het
Tfr2	C	T	5: 137,581,707 (GRCm39)	T598I	probably damaging	Het
Tmc2	A	G	2: 130,102,145 (GRCm39)	Q770R	probably benign	Het
Tnc	C	T	4: 63,932,231 (GRCm39)	V728M	probably damaging	Het
Trim68	A	T	7: 102,329,597 (GRCm39)	M177K	possibly damaging	Het
Trmt11	T	C	10: 30,435,184 (GRCm39)	D325G	probably benign	Het
Ube3a	C	T	7: 58,935,862 (GRCm39)	T582I	probably damaging	Het
Usp13	G	A	3: 32,969,919 (GRCm39)	E682K	probably benign	Het
Usp9y	A	G	Y: 1,384,454 (GRCm39)	V688A	possibly damaging	Het
Uts2r	A	G	11: 121,052,095 (GRCm39)	T320A	possibly damaging	Het
Vmn1r34	A	T	6: 66,614,480 (GRCm39)	M86K	probably damaging	Het
Vsig10	A	G	5: 117,456,880 (GRCm39)		probably benign	Het
Zbtb41	T	A	1: 139,368,132 (GRCm39)	C607S	probably benign	Het

Other mutations in Adgrl4

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00488:Adgrl4	APN	3	151,248,478 (GRCm39)	missense	probably damaging	1.00
IGL00694:Adgrl4	APN	3	151,145,033 (GRCm39)	splice site	probably benign
IGL01143:Adgrl4	APN	3	151,205,866 (GRCm39)	splice site	probably null
IGL01359:Adgrl4	APN	3	151,248,923 (GRCm39)	missense	probably damaging	1.00
IGL01947:Adgrl4	APN	3	151,216,428 (GRCm39)	critical splice donor site	probably null
IGL02149:Adgrl4	APN	3	151,205,991 (GRCm39)	missense	possibly damaging	0.95
IGL02324:Adgrl4	APN	3	151,203,511 (GRCm39)	missense	probably damaging	1.00
IGL02562:Adgrl4	APN	3	151,144,949 (GRCm39)	missense	probably damaging	1.00
IGL02644:Adgrl4	APN	3	151,198,007 (GRCm39)	missense	probably benign	0.00
trivial	UTSW	3	151,223,247 (GRCm39)	missense	probably benign	0.07
R0077:Adgrl4	UTSW	3	151,223,418 (GRCm39)	missense	probably damaging	1.00
R0116:Adgrl4	UTSW	3	151,223,247 (GRCm39)	missense	probably benign	0.07
R0331:Adgrl4	UTSW	3	151,203,577 (GRCm39)	missense	probably benign	0.00
R0601:Adgrl4	UTSW	3	151,204,066 (GRCm39)	splice site	probably benign
R0613:Adgrl4	UTSW	3	151,248,859 (GRCm39)	splice site	probably benign
R1293:Adgrl4	UTSW	3	151,213,081 (GRCm39)	missense	probably benign	0.00
R1463:Adgrl4	UTSW	3	151,216,233 (GRCm39)	missense	probably damaging	0.98
R1697:Adgrl4	UTSW	3	151,223,248 (GRCm39)	missense	probably damaging	1.00
R1731:Adgrl4	UTSW	3	151,246,623 (GRCm39)	missense	possibly damaging	0.64
R1782:Adgrl4	UTSW	3	151,248,442 (GRCm39)	nonsense	probably null
R1888:Adgrl4	UTSW	3	151,144,914 (GRCm39)	missense	probably benign	0.11
R1888:Adgrl4	UTSW	3	151,144,914 (GRCm39)	missense	probably benign	0.11
R1957:Adgrl4	UTSW	3	151,216,416 (GRCm39)	missense	possibly damaging	0.94
R2128:Adgrl4	UTSW	3	151,205,838 (GRCm39)	missense	probably benign	0.00
R2180:Adgrl4	UTSW	3	151,205,779 (GRCm39)	missense	probably damaging	0.96
R2238:Adgrl4	UTSW	3	151,205,779 (GRCm39)	missense	probably damaging	0.96
R2474:Adgrl4	UTSW	3	151,248,361 (GRCm39)	missense	probably benign	0.01
R2697:Adgrl4	UTSW	3	151,216,260 (GRCm39)	missense	probably damaging	1.00
R3835:Adgrl4	UTSW	3	151,216,254 (GRCm39)	missense	probably damaging	1.00
R4499:Adgrl4	UTSW	3	151,216,422 (GRCm39)	missense	possibly damaging	0.81
R4640:Adgrl4	UTSW	3	151,205,947 (GRCm39)	unclassified	probably benign
R4747:Adgrl4	UTSW	3	151,213,077 (GRCm39)	missense	probably benign	0.01
R5428:Adgrl4	UTSW	3	151,248,323 (GRCm39)	missense	probably damaging	1.00
R5510:Adgrl4	UTSW	3	151,203,467 (GRCm39)	missense	possibly damaging	0.89
R5717:Adgrl4	UTSW	3	151,197,971 (GRCm39)	missense	probably benign	0.01
R6106:Adgrl4	UTSW	3	151,246,622 (GRCm39)	missense	possibly damaging	0.67
R6343:Adgrl4	UTSW	3	151,223,443 (GRCm39)	missense	probably damaging	1.00
R6419:Adgrl4	UTSW	3	151,144,953 (GRCm39)	missense	probably damaging	1.00
R6468:Adgrl4	UTSW	3	151,198,012 (GRCm39)	missense	probably benign
R6636:Adgrl4	UTSW	3	151,223,410 (GRCm39)	nonsense	probably null
R6637:Adgrl4	UTSW	3	151,223,410 (GRCm39)	nonsense	probably null
R6687:Adgrl4	UTSW	3	151,248,392 (GRCm39)	missense	probably benign	0.00
R6856:Adgrl4	UTSW	3	151,205,755 (GRCm39)	missense	probably benign	0.00
R6887:Adgrl4	UTSW	3	151,248,370 (GRCm39)	missense	possibly damaging	0.46
R7041:Adgrl4	UTSW	3	151,144,959 (GRCm39)	missense	probably benign	0.00
R7527:Adgrl4	UTSW	3	151,144,887 (GRCm39)	missense	probably benign	0.08
R7597:Adgrl4	UTSW	3	151,248,895 (GRCm39)	missense	probably damaging	1.00
R7751:Adgrl4	UTSW	3	151,197,946 (GRCm39)	missense	probably damaging	0.99
R8556:Adgrl4	UTSW	3	151,216,302 (GRCm39)	missense	probably damaging	0.98
R8696:Adgrl4	UTSW	3	151,248,344 (GRCm39)	missense	probably damaging	1.00
R8698:Adgrl4	UTSW	3	151,203,512 (GRCm39)	missense	probably damaging	1.00
R8795:Adgrl4	UTSW	3	151,216,416 (GRCm39)	missense	probably benign	0.03
R9226:Adgrl4	UTSW	3	151,198,064 (GRCm39)	critical splice donor site	probably null
R9655:Adgrl4	UTSW	3	151,248,450 (GRCm39)	missense	probably damaging	0.96
R9755:Adgrl4	UTSW	3	151,216,418 (GRCm39)	missense	probably benign	0.01
R9767:Adgrl4	UTSW	3	151,207,394 (GRCm39)	missense	probably benign	0.16
R9784:Adgrl4	UTSW	3	151,214,948 (GRCm39)	missense	probably damaging	1.00
X0053:Adgrl4	UTSW	3	151,203,470 (GRCm39)	missense	probably damaging	1.00
Z1088:Adgrl4	UTSW	3	151,205,812 (GRCm39)	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- CTTCACAGTCAGCAATGCTTTCCAAG -3'
(R):5'- GAAAACACACTGTAGCTCTCTGGTCC -3'

Sequencing Primer
(F):5'- tttaaaatGCCAGCATATAGATGCTC -3'
(R):5'- GTAGCTCTCTGGTCCATAATTTTATC -3'

Posted On

2014-05-23