Incidental Mutation 'R1765:Agrn'
ID |
194274 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Agrn
|
Ensembl Gene |
ENSMUSG00000041936 |
Gene Name |
agrin |
Synonyms |
Agrin, NMF380, nmf380 |
MMRRC Submission |
039797-MU
|
Accession Numbers |
|
Essential gene? |
Possibly non essential
(E-score: 0.458)
|
Stock # |
R1765 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
4 |
Chromosomal Location |
156249747-156281945 bp(-) (GRCm39) |
Type of Mutation |
nonsense |
DNA Base Change (assembly) |
A to T
at 156261284 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Cysteine to Stop codon
at position 604
(C604*)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000137931
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000071248]
[ENSMUST00000105574]
[ENSMUST00000105575]
[ENSMUST00000180572]
|
AlphaFold |
A2ASQ1 |
Predicted Effect |
probably null
Transcript: ENSMUST00000071248
AA Change: C497*
|
SMART Domains |
Protein: ENSMUSP00000071229 Gene: ENSMUSG00000041936 AA Change: C497*
Domain | Start | End | E-Value | Type |
transmembrane domain
|
25 |
47 |
N/A |
INTRINSIC |
FOLN
|
66 |
91 |
8.25e-6 |
SMART |
KAZAL
|
91 |
137 |
1.22e-17 |
SMART |
FOLN
|
142 |
166 |
7.58e-5 |
SMART |
EGF_like
|
142 |
181 |
7.38e1 |
SMART |
KAZAL
|
166 |
212 |
1.51e-13 |
SMART |
KAZAL
|
241 |
284 |
1.8e-6 |
SMART |
KAZAL
|
310 |
356 |
1.55e-10 |
SMART |
FOLN
|
362 |
384 |
8.25e-6 |
SMART |
KAZAL
|
384 |
429 |
1.14e-17 |
SMART |
KAZAL
|
449 |
494 |
6.43e-17 |
SMART |
FOLN
|
496 |
519 |
2.94e-2 |
SMART |
KAZAL
|
507 |
559 |
8.96e-16 |
SMART |
low complexity region
|
565 |
572 |
N/A |
INTRINSIC |
KAZAL
|
599 |
645 |
1.12e-16 |
SMART |
EGF_Lam
|
688 |
739 |
3.29e-15 |
SMART |
EGF_Lam
|
742 |
786 |
6.7e-7 |
SMART |
FOLN
|
795 |
817 |
1.94e-2 |
SMART |
KAZAL
|
817 |
864 |
3.9e-16 |
SMART |
low complexity region
|
889 |
906 |
N/A |
INTRINSIC |
low complexity region
|
949 |
978 |
N/A |
INTRINSIC |
SEA
|
1014 |
1139 |
5.57e-35 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000105574
AA Change: C497*
|
SMART Domains |
Protein: ENSMUSP00000101199 Gene: ENSMUSG00000041936 AA Change: C497*
Domain | Start | End | E-Value | Type |
transmembrane domain
|
25 |
47 |
N/A |
INTRINSIC |
FOLN
|
66 |
91 |
8.25e-6 |
SMART |
KAZAL
|
91 |
137 |
1.22e-17 |
SMART |
FOLN
|
142 |
166 |
7.58e-5 |
SMART |
EGF_like
|
142 |
181 |
7.38e1 |
SMART |
KAZAL
|
166 |
212 |
1.51e-13 |
SMART |
KAZAL
|
241 |
284 |
1.8e-6 |
SMART |
KAZAL
|
310 |
356 |
1.55e-10 |
SMART |
FOLN
|
362 |
384 |
8.25e-6 |
SMART |
KAZAL
|
384 |
429 |
1.14e-17 |
SMART |
KAZAL
|
449 |
494 |
6.43e-17 |
SMART |
FOLN
|
496 |
519 |
2.94e-2 |
SMART |
KAZAL
|
507 |
559 |
8.96e-16 |
SMART |
low complexity region
|
565 |
572 |
N/A |
INTRINSIC |
KAZAL
|
599 |
645 |
1.12e-16 |
SMART |
EGF_Lam
|
688 |
739 |
3.29e-15 |
SMART |
EGF_Lam
|
742 |
786 |
6.7e-7 |
SMART |
FOLN
|
795 |
817 |
1.94e-2 |
SMART |
KAZAL
|
817 |
864 |
3.9e-16 |
SMART |
low complexity region
|
889 |
906 |
N/A |
INTRINSIC |
low complexity region
|
949 |
978 |
N/A |
INTRINSIC |
SEA
|
1014 |
1136 |
2.26e-35 |
SMART |
low complexity region
|
1142 |
1169 |
N/A |
INTRINSIC |
low complexity region
|
1183 |
1198 |
N/A |
INTRINSIC |
EGF
|
1214 |
1249 |
1.49e-4 |
SMART |
LamG
|
1274 |
1410 |
4e-45 |
SMART |
EGF
|
1434 |
1468 |
2.23e-3 |
SMART |
EGF
|
1473 |
1507 |
7.13e-2 |
SMART |
LamG
|
1542 |
1678 |
6.51e-36 |
SMART |
EGF
|
1699 |
1735 |
4.35e-6 |
SMART |
LamG
|
1771 |
1907 |
5.01e-37 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000105575
AA Change: C497*
|
SMART Domains |
Protein: ENSMUSP00000101200 Gene: ENSMUSG00000041936 AA Change: C497*
Domain | Start | End | E-Value | Type |
transmembrane domain
|
25 |
47 |
N/A |
INTRINSIC |
FOLN
|
66 |
91 |
8.25e-6 |
SMART |
KAZAL
|
91 |
137 |
1.22e-17 |
SMART |
FOLN
|
142 |
166 |
7.58e-5 |
SMART |
EGF_like
|
142 |
181 |
7.38e1 |
SMART |
KAZAL
|
166 |
212 |
1.51e-13 |
SMART |
KAZAL
|
241 |
284 |
1.8e-6 |
SMART |
KAZAL
|
310 |
356 |
1.55e-10 |
SMART |
FOLN
|
362 |
384 |
8.25e-6 |
SMART |
KAZAL
|
384 |
429 |
1.14e-17 |
SMART |
KAZAL
|
449 |
494 |
6.43e-17 |
SMART |
FOLN
|
496 |
519 |
2.94e-2 |
SMART |
KAZAL
|
507 |
559 |
8.96e-16 |
SMART |
low complexity region
|
565 |
572 |
N/A |
INTRINSIC |
KAZAL
|
599 |
645 |
1.12e-16 |
SMART |
EGF_Lam
|
688 |
739 |
3.29e-15 |
SMART |
EGF_Lam
|
742 |
786 |
6.7e-7 |
SMART |
FOLN
|
795 |
817 |
1.94e-2 |
SMART |
KAZAL
|
817 |
864 |
3.9e-16 |
SMART |
low complexity region
|
889 |
906 |
N/A |
INTRINSIC |
low complexity region
|
949 |
978 |
N/A |
INTRINSIC |
SEA
|
1014 |
1136 |
2.26e-35 |
SMART |
low complexity region
|
1142 |
1169 |
N/A |
INTRINSIC |
low complexity region
|
1183 |
1198 |
N/A |
INTRINSIC |
EGF
|
1214 |
1249 |
1.49e-4 |
SMART |
LamG
|
1274 |
1410 |
4e-45 |
SMART |
EGF
|
1434 |
1468 |
2.23e-3 |
SMART |
EGF
|
1473 |
1507 |
7.13e-2 |
SMART |
LamG
|
1542 |
1682 |
9.2e-36 |
SMART |
EGF
|
1703 |
1739 |
4.35e-6 |
SMART |
LamG
|
1794 |
1930 |
5.01e-37 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000144749
|
Predicted Effect |
probably null
Transcript: ENSMUST00000180572
AA Change: C604*
|
SMART Domains |
Protein: ENSMUSP00000137931 Gene: ENSMUSG00000041936 AA Change: C604*
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
31 |
N/A |
INTRINSIC |
Pfam:NtA
|
32 |
159 |
5.1e-91 |
PFAM |
FOLN
|
173 |
198 |
8.25e-6 |
SMART |
KAZAL
|
198 |
244 |
1.22e-17 |
SMART |
FOLN
|
249 |
273 |
7.58e-5 |
SMART |
EGF_like
|
249 |
288 |
7.38e1 |
SMART |
KAZAL
|
273 |
319 |
1.51e-13 |
SMART |
KAZAL
|
348 |
391 |
1.8e-6 |
SMART |
KAZAL
|
417 |
463 |
1.55e-10 |
SMART |
FOLN
|
469 |
491 |
8.25e-6 |
SMART |
KAZAL
|
491 |
536 |
1.14e-17 |
SMART |
KAZAL
|
556 |
601 |
6.43e-17 |
SMART |
FOLN
|
603 |
626 |
2.94e-2 |
SMART |
KAZAL
|
614 |
666 |
8.96e-16 |
SMART |
low complexity region
|
672 |
679 |
N/A |
INTRINSIC |
KAZAL
|
706 |
752 |
1.12e-16 |
SMART |
EGF_Lam
|
795 |
846 |
3.29e-15 |
SMART |
EGF_Lam
|
849 |
893 |
6.7e-7 |
SMART |
FOLN
|
902 |
924 |
1.94e-2 |
SMART |
KAZAL
|
924 |
971 |
3.9e-16 |
SMART |
low complexity region
|
996 |
1013 |
N/A |
INTRINSIC |
low complexity region
|
1056 |
1085 |
N/A |
INTRINSIC |
SEA
|
1121 |
1243 |
2.26e-35 |
SMART |
low complexity region
|
1249 |
1276 |
N/A |
INTRINSIC |
low complexity region
|
1290 |
1305 |
N/A |
INTRINSIC |
EGF
|
1321 |
1356 |
1.49e-4 |
SMART |
LamG
|
1381 |
1517 |
4e-45 |
SMART |
EGF
|
1541 |
1575 |
2.23e-3 |
SMART |
EGF
|
1580 |
1614 |
7.13e-2 |
SMART |
LamG
|
1649 |
1785 |
6.51e-36 |
SMART |
EGF
|
1806 |
1842 |
4.35e-6 |
SMART |
LamG
|
1878 |
2014 |
5.01e-37 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000181062
|
Meta Mutation Damage Score |
0.9755 |
Coding Region Coverage |
- 1x: 97.5%
- 3x: 96.8%
- 10x: 95.1%
- 20x: 91.8%
|
Validation Efficiency |
99% (90/91) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes one of several proteins that are critical in the development of the neuromuscular junction (NMJ), as identified in mouse knock-out studies. The encoded protein contains several laminin G, Kazal type serine protease inhibitor, and epidermal growth factor domains. Additional post-translational modifications occur to add glycosaminoglycans and disulfide bonds. In one family with congenital myasthenic syndrome affecting limb-girdle muscles, a mutation in this gene was found. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Mar 2015] PHENOTYPE: Nullizygous mice display embryonic failure of NMJ formation, inability to breathe or move and perinatal lethality. Homozygotes for an ENU-induced allele show poor hindlimb motor control, myopathy, muscle atrophy, spasms and fiber-type switching, NMJ disaggregation, camptodactyly and premature death. [provided by MGI curators]
|
Allele List at MGI |
All alleles(12) : Targeted, knock-out(4) Targeted, other(1) Gene trapped(7) |
Other mutations in this stock |
Total: 87 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4933412E24Rik |
G |
T |
15: 59,887,194 (GRCm39) |
C415* |
probably null |
Het |
Adamtsl2 |
A |
C |
2: 26,992,842 (GRCm39) |
I652L |
probably benign |
Het |
Adgrl4 |
T |
C |
3: 151,248,872 (GRCm39) |
I720T |
probably damaging |
Het |
Amh |
AGCGCCTTGG |
AG |
10: 80,641,419 (GRCm39) |
|
probably null |
Het |
B3galt2 |
C |
A |
1: 143,522,207 (GRCm39) |
N114K |
probably benign |
Het |
Bud23 |
A |
T |
5: 135,084,897 (GRCm39) |
M59K |
probably benign |
Het |
C3 |
C |
T |
17: 57,531,401 (GRCm39) |
|
probably null |
Het |
C9orf72 |
A |
C |
4: 35,197,098 (GRCm39) |
H322Q |
probably damaging |
Het |
Cc2d2a |
A |
T |
5: 43,871,873 (GRCm39) |
D903V |
probably damaging |
Het |
Ccdc9b |
G |
A |
2: 118,591,128 (GRCm39) |
A135V |
probably benign |
Het |
Cd84 |
A |
G |
1: 171,700,317 (GRCm39) |
T145A |
possibly damaging |
Het |
Cdan1 |
A |
C |
2: 120,551,230 (GRCm39) |
L1097V |
probably damaging |
Het |
Cdc26 |
T |
A |
4: 62,313,155 (GRCm39) |
N62I |
probably benign |
Het |
Cdc27 |
G |
T |
11: 104,425,607 (GRCm39) |
Q70K |
probably damaging |
Het |
Cenpq |
A |
T |
17: 41,235,178 (GRCm39) |
|
probably null |
Het |
Cep295 |
T |
C |
9: 15,239,200 (GRCm39) |
S1858G |
probably damaging |
Het |
Clasp1 |
T |
C |
1: 118,433,261 (GRCm39) |
S247P |
probably damaging |
Het |
Cyp2w1 |
C |
T |
5: 139,339,623 (GRCm39) |
T71I |
probably damaging |
Het |
Dcaf1 |
T |
C |
9: 106,741,793 (GRCm39) |
F1336S |
probably damaging |
Het |
Dennd6b |
G |
A |
15: 89,074,506 (GRCm39) |
Q104* |
probably null |
Het |
Dglucy |
T |
A |
12: 100,816,361 (GRCm39) |
|
probably null |
Het |
Dnajc9 |
A |
G |
14: 20,438,158 (GRCm39) |
V148A |
possibly damaging |
Het |
Dnmbp |
T |
A |
19: 43,890,579 (GRCm39) |
D396V |
possibly damaging |
Het |
Dock10 |
T |
A |
1: 80,583,540 (GRCm39) |
I221F |
probably damaging |
Het |
Dscam |
T |
C |
16: 96,486,579 (GRCm39) |
N1032S |
probably benign |
Het |
Dsg4 |
A |
C |
18: 20,589,888 (GRCm39) |
Y346S |
probably benign |
Het |
Dync1i2 |
A |
G |
2: 71,079,759 (GRCm39) |
H417R |
probably benign |
Het |
Dysf |
G |
A |
6: 84,167,884 (GRCm39) |
|
probably null |
Het |
Elovl1 |
A |
G |
4: 118,287,707 (GRCm39) |
M1V |
probably null |
Het |
Eva1c |
A |
G |
16: 90,701,135 (GRCm39) |
S257G |
probably benign |
Het |
Eya2 |
A |
T |
2: 165,566,723 (GRCm39) |
D258V |
probably damaging |
Het |
Fam193a |
A |
G |
5: 34,593,841 (GRCm39) |
T113A |
probably damaging |
Het |
Fbxw15 |
G |
A |
9: 109,387,314 (GRCm39) |
S227F |
probably damaging |
Het |
Fstl5 |
G |
T |
3: 76,500,783 (GRCm39) |
R404L |
possibly damaging |
Het |
Glud1 |
T |
C |
14: 34,047,541 (GRCm39) |
|
probably benign |
Het |
Gm10770 |
A |
C |
2: 150,021,258 (GRCm39) |
H86Q |
probably damaging |
Het |
Gzme |
C |
T |
14: 56,355,871 (GRCm39) |
G147D |
probably damaging |
Het |
Herc3 |
T |
C |
6: 58,865,645 (GRCm39) |
V746A |
probably damaging |
Het |
Hmga1 |
A |
G |
17: 27,778,592 (GRCm39) |
E17G |
probably damaging |
Het |
Kdelr2 |
A |
T |
5: 143,406,567 (GRCm39) |
K206* |
probably null |
Het |
Kng2 |
A |
G |
16: 22,806,993 (GRCm39) |
|
probably null |
Het |
Lrrc41 |
G |
A |
4: 115,946,248 (GRCm39) |
R321H |
possibly damaging |
Het |
Mapkapk2 |
A |
T |
1: 130,986,498 (GRCm39) |
M1K |
probably null |
Het |
Me2 |
A |
G |
18: 73,924,929 (GRCm39) |
F263L |
probably damaging |
Het |
Mkks |
A |
G |
2: 136,722,287 (GRCm39) |
L290P |
probably damaging |
Het |
Mmp12 |
T |
A |
9: 7,354,772 (GRCm39) |
I255N |
probably damaging |
Het |
Mogs |
A |
G |
6: 83,093,784 (GRCm39) |
D251G |
probably benign |
Het |
Morf4l1 |
T |
A |
9: 89,984,401 (GRCm39) |
Y65F |
possibly damaging |
Het |
Neb |
T |
C |
2: 52,094,676 (GRCm39) |
D5169G |
probably damaging |
Het |
Nin |
A |
G |
12: 70,089,665 (GRCm39) |
L1250P |
probably damaging |
Het |
Nomo1 |
G |
T |
7: 45,715,717 (GRCm39) |
G721V |
possibly damaging |
Het |
Notch2 |
T |
G |
3: 98,029,242 (GRCm39) |
C1002G |
probably damaging |
Het |
Npat |
T |
C |
9: 53,481,522 (GRCm39) |
Y1077H |
probably benign |
Het |
Or1e1c |
T |
A |
11: 73,266,170 (GRCm39) |
N198K |
probably damaging |
Het |
Or4g17 |
G |
A |
2: 111,209,491 (GRCm39) |
V49I |
probably benign |
Het |
Or4p21 |
A |
T |
2: 88,276,367 (GRCm39) |
F305Y |
probably damaging |
Het |
Or5h25 |
A |
G |
16: 58,930,118 (GRCm39) |
L285P |
probably damaging |
Het |
Or8c16 |
T |
C |
9: 38,130,548 (GRCm39) |
I143T |
probably benign |
Het |
Otop2 |
A |
T |
11: 115,215,504 (GRCm39) |
I142F |
probably benign |
Het |
Pacsin3 |
A |
G |
2: 91,093,460 (GRCm39) |
E279G |
possibly damaging |
Het |
Pafah2 |
A |
G |
4: 134,140,758 (GRCm39) |
T243A |
probably benign |
Het |
Pcdhgc5 |
A |
G |
18: 37,954,913 (GRCm39) |
H729R |
probably benign |
Het |
Plcd1 |
T |
C |
9: 118,900,874 (GRCm39) |
D756G |
probably damaging |
Het |
Prune2 |
A |
G |
19: 17,102,962 (GRCm39) |
E2707G |
probably damaging |
Het |
Rit2 |
C |
T |
18: 31,449,951 (GRCm39) |
G16S |
probably damaging |
Het |
Sec24c |
A |
G |
14: 20,738,922 (GRCm39) |
|
probably benign |
Het |
Skint5 |
G |
T |
4: 113,434,858 (GRCm39) |
T1037K |
unknown |
Het |
Slc28a2 |
T |
A |
2: 122,290,876 (GRCm39) |
|
probably null |
Het |
Slc41a2 |
G |
A |
10: 83,137,130 (GRCm39) |
A259V |
probably damaging |
Het |
Slc6a17 |
T |
A |
3: 107,380,895 (GRCm39) |
I537F |
possibly damaging |
Het |
Slco1a7 |
T |
C |
6: 141,700,084 (GRCm39) |
|
probably benign |
Het |
Smchd1 |
A |
T |
17: 71,707,196 (GRCm39) |
|
probably benign |
Het |
Smg1 |
T |
C |
7: 117,738,938 (GRCm39) |
I3489V |
probably benign |
Het |
Sytl3 |
T |
C |
17: 6,967,082 (GRCm39) |
L142P |
probably damaging |
Het |
Tektl1 |
A |
T |
10: 78,584,502 (GRCm39) |
M340K |
probably benign |
Het |
Tfr2 |
C |
T |
5: 137,581,707 (GRCm39) |
T598I |
probably damaging |
Het |
Tmc2 |
A |
G |
2: 130,102,145 (GRCm39) |
Q770R |
probably benign |
Het |
Tnc |
C |
T |
4: 63,932,231 (GRCm39) |
V728M |
probably damaging |
Het |
Trim68 |
A |
T |
7: 102,329,597 (GRCm39) |
M177K |
possibly damaging |
Het |
Trmt11 |
T |
C |
10: 30,435,184 (GRCm39) |
D325G |
probably benign |
Het |
Ube3a |
C |
T |
7: 58,935,862 (GRCm39) |
T582I |
probably damaging |
Het |
Usp13 |
G |
A |
3: 32,969,919 (GRCm39) |
E682K |
probably benign |
Het |
Usp9y |
A |
G |
Y: 1,384,454 (GRCm39) |
V688A |
possibly damaging |
Het |
Uts2r |
A |
G |
11: 121,052,095 (GRCm39) |
T320A |
possibly damaging |
Het |
Vmn1r34 |
A |
T |
6: 66,614,480 (GRCm39) |
M86K |
probably damaging |
Het |
Vsig10 |
A |
G |
5: 117,456,880 (GRCm39) |
|
probably benign |
Het |
Zbtb41 |
T |
A |
1: 139,368,132 (GRCm39) |
C607S |
probably benign |
Het |
|
Other mutations in Agrn |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00479:Agrn
|
APN |
4 |
156,255,029 (GRCm39) |
splice site |
probably benign |
|
IGL00811:Agrn
|
APN |
4 |
156,253,231 (GRCm39) |
missense |
possibly damaging |
0.70 |
IGL01066:Agrn
|
APN |
4 |
156,261,800 (GRCm39) |
missense |
probably benign |
0.00 |
IGL01412:Agrn
|
APN |
4 |
156,255,491 (GRCm39) |
splice site |
probably benign |
|
IGL01414:Agrn
|
APN |
4 |
156,279,696 (GRCm39) |
splice site |
probably null |
|
IGL02075:Agrn
|
APN |
4 |
156,254,667 (GRCm39) |
missense |
probably benign |
0.40 |
IGL02609:Agrn
|
APN |
4 |
156,259,680 (GRCm39) |
splice site |
probably benign |
|
IGL02669:Agrn
|
APN |
4 |
156,259,018 (GRCm39) |
splice site |
probably benign |
|
IGL02671:Agrn
|
APN |
4 |
156,259,018 (GRCm39) |
splice site |
probably benign |
|
IGL02672:Agrn
|
APN |
4 |
156,259,018 (GRCm39) |
splice site |
probably benign |
|
IGL02674:Agrn
|
APN |
4 |
156,259,018 (GRCm39) |
splice site |
probably benign |
|
IGL02724:Agrn
|
APN |
4 |
156,257,264 (GRCm39) |
nonsense |
probably null |
|
IGL02804:Agrn
|
APN |
4 |
156,258,512 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02986:Agrn
|
APN |
4 |
156,263,311 (GRCm39) |
missense |
possibly damaging |
0.84 |
IGL03160:Agrn
|
APN |
4 |
156,254,820 (GRCm39) |
missense |
probably damaging |
0.98 |
BB004:Agrn
|
UTSW |
4 |
156,257,266 (GRCm39) |
missense |
probably damaging |
0.99 |
BB014:Agrn
|
UTSW |
4 |
156,257,266 (GRCm39) |
missense |
probably damaging |
0.99 |
F6893:Agrn
|
UTSW |
4 |
156,258,636 (GRCm39) |
missense |
probably benign |
|
R0092:Agrn
|
UTSW |
4 |
156,263,410 (GRCm39) |
missense |
probably damaging |
1.00 |
R0100:Agrn
|
UTSW |
4 |
156,259,415 (GRCm39) |
missense |
probably damaging |
1.00 |
R0100:Agrn
|
UTSW |
4 |
156,259,415 (GRCm39) |
missense |
probably damaging |
1.00 |
R0482:Agrn
|
UTSW |
4 |
156,258,012 (GRCm39) |
missense |
probably damaging |
0.98 |
R0531:Agrn
|
UTSW |
4 |
156,263,891 (GRCm39) |
missense |
probably benign |
0.38 |
R0536:Agrn
|
UTSW |
4 |
156,264,010 (GRCm39) |
missense |
probably benign |
0.01 |
R0690:Agrn
|
UTSW |
4 |
156,258,910 (GRCm39) |
missense |
probably damaging |
1.00 |
R0750:Agrn
|
UTSW |
4 |
156,251,394 (GRCm39) |
nonsense |
probably null |
|
R1079:Agrn
|
UTSW |
4 |
156,261,682 (GRCm39) |
missense |
probably damaging |
1.00 |
R1199:Agrn
|
UTSW |
4 |
156,256,756 (GRCm39) |
missense |
probably benign |
0.00 |
R1222:Agrn
|
UTSW |
4 |
156,261,842 (GRCm39) |
missense |
probably damaging |
0.99 |
R1534:Agrn
|
UTSW |
4 |
156,261,141 (GRCm39) |
missense |
probably damaging |
1.00 |
R1587:Agrn
|
UTSW |
4 |
156,263,897 (GRCm39) |
missense |
probably damaging |
0.99 |
R1625:Agrn
|
UTSW |
4 |
156,257,317 (GRCm39) |
missense |
probably damaging |
1.00 |
R1698:Agrn
|
UTSW |
4 |
156,251,015 (GRCm39) |
missense |
probably benign |
0.03 |
R1717:Agrn
|
UTSW |
4 |
156,250,976 (GRCm39) |
frame shift |
probably null |
|
R1718:Agrn
|
UTSW |
4 |
156,250,976 (GRCm39) |
frame shift |
probably null |
|
R1721:Agrn
|
UTSW |
4 |
156,259,630 (GRCm39) |
nonsense |
probably null |
|
R1840:Agrn
|
UTSW |
4 |
156,251,872 (GRCm39) |
missense |
probably damaging |
1.00 |
R1865:Agrn
|
UTSW |
4 |
156,250,976 (GRCm39) |
frame shift |
probably null |
|
R2105:Agrn
|
UTSW |
4 |
156,261,756 (GRCm39) |
nonsense |
probably null |
|
R2265:Agrn
|
UTSW |
4 |
156,263,675 (GRCm39) |
missense |
probably damaging |
0.99 |
R2266:Agrn
|
UTSW |
4 |
156,263,675 (GRCm39) |
missense |
probably damaging |
0.99 |
R2269:Agrn
|
UTSW |
4 |
156,263,675 (GRCm39) |
missense |
probably damaging |
0.99 |
R2382:Agrn
|
UTSW |
4 |
156,260,973 (GRCm39) |
missense |
probably damaging |
0.97 |
R2497:Agrn
|
UTSW |
4 |
156,258,268 (GRCm39) |
missense |
probably benign |
0.28 |
R2509:Agrn
|
UTSW |
4 |
156,250,881 (GRCm39) |
splice site |
probably null |
|
R2510:Agrn
|
UTSW |
4 |
156,250,881 (GRCm39) |
splice site |
probably null |
|
R2511:Agrn
|
UTSW |
4 |
156,250,881 (GRCm39) |
splice site |
probably null |
|
R2994:Agrn
|
UTSW |
4 |
156,251,785 (GRCm39) |
missense |
possibly damaging |
0.79 |
R3824:Agrn
|
UTSW |
4 |
156,253,759 (GRCm39) |
missense |
probably damaging |
1.00 |
R4736:Agrn
|
UTSW |
4 |
156,256,858 (GRCm39) |
missense |
probably benign |
0.38 |
R4755:Agrn
|
UTSW |
4 |
156,257,979 (GRCm39) |
intron |
probably benign |
|
R4853:Agrn
|
UTSW |
4 |
156,270,007 (GRCm39) |
critical splice donor site |
probably null |
|
R4878:Agrn
|
UTSW |
4 |
156,255,302 (GRCm39) |
missense |
probably damaging |
1.00 |
R5117:Agrn
|
UTSW |
4 |
156,270,010 (GRCm39) |
missense |
probably benign |
0.30 |
R5228:Agrn
|
UTSW |
4 |
156,251,403 (GRCm39) |
missense |
probably damaging |
1.00 |
R5236:Agrn
|
UTSW |
4 |
156,263,315 (GRCm39) |
missense |
possibly damaging |
0.93 |
R5269:Agrn
|
UTSW |
4 |
156,253,447 (GRCm39) |
missense |
probably benign |
0.10 |
R5282:Agrn
|
UTSW |
4 |
156,257,492 (GRCm39) |
missense |
probably damaging |
1.00 |
R5449:Agrn
|
UTSW |
4 |
156,251,737 (GRCm39) |
critical splice donor site |
probably null |
|
R5560:Agrn
|
UTSW |
4 |
156,262,954 (GRCm39) |
missense |
probably damaging |
0.99 |
R5668:Agrn
|
UTSW |
4 |
156,251,770 (GRCm39) |
missense |
probably damaging |
0.97 |
R5725:Agrn
|
UTSW |
4 |
156,258,332 (GRCm39) |
missense |
probably benign |
0.25 |
R5967:Agrn
|
UTSW |
4 |
156,259,560 (GRCm39) |
missense |
probably damaging |
1.00 |
R6226:Agrn
|
UTSW |
4 |
156,258,066 (GRCm39) |
missense |
probably damaging |
0.96 |
R6338:Agrn
|
UTSW |
4 |
156,255,042 (GRCm39) |
missense |
probably benign |
0.17 |
R6351:Agrn
|
UTSW |
4 |
156,263,891 (GRCm39) |
missense |
probably benign |
0.00 |
R6437:Agrn
|
UTSW |
4 |
156,261,235 (GRCm39) |
missense |
probably damaging |
0.96 |
R6490:Agrn
|
UTSW |
4 |
156,251,819 (GRCm39) |
nonsense |
probably null |
|
R6909:Agrn
|
UTSW |
4 |
156,261,464 (GRCm39) |
missense |
possibly damaging |
0.90 |
R7110:Agrn
|
UTSW |
4 |
156,263,332 (GRCm39) |
missense |
possibly damaging |
0.88 |
R7123:Agrn
|
UTSW |
4 |
156,257,297 (GRCm39) |
missense |
probably benign |
|
R7163:Agrn
|
UTSW |
4 |
156,262,966 (GRCm39) |
missense |
probably damaging |
1.00 |
R7180:Agrn
|
UTSW |
4 |
156,256,296 (GRCm39) |
missense |
probably benign |
0.00 |
R7251:Agrn
|
UTSW |
4 |
156,259,063 (GRCm39) |
missense |
probably damaging |
1.00 |
R7289:Agrn
|
UTSW |
4 |
156,263,389 (GRCm39) |
missense |
probably damaging |
1.00 |
R7335:Agrn
|
UTSW |
4 |
156,260,989 (GRCm39) |
missense |
probably damaging |
1.00 |
R7336:Agrn
|
UTSW |
4 |
156,259,371 (GRCm39) |
nonsense |
probably null |
|
R7406:Agrn
|
UTSW |
4 |
156,256,758 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7460:Agrn
|
UTSW |
4 |
156,258,881 (GRCm39) |
missense |
probably damaging |
0.98 |
R7531:Agrn
|
UTSW |
4 |
156,254,261 (GRCm39) |
missense |
probably damaging |
1.00 |
R7585:Agrn
|
UTSW |
4 |
156,255,131 (GRCm39) |
missense |
probably benign |
0.08 |
R7646:Agrn
|
UTSW |
4 |
156,279,811 (GRCm39) |
missense |
probably damaging |
0.99 |
R7652:Agrn
|
UTSW |
4 |
156,253,675 (GRCm39) |
critical splice donor site |
probably null |
|
R7714:Agrn
|
UTSW |
4 |
156,279,854 (GRCm39) |
missense |
probably damaging |
1.00 |
R7751:Agrn
|
UTSW |
4 |
156,260,886 (GRCm39) |
missense |
probably damaging |
1.00 |
R7852:Agrn
|
UTSW |
4 |
156,253,514 (GRCm39) |
missense |
probably benign |
0.01 |
R7927:Agrn
|
UTSW |
4 |
156,257,266 (GRCm39) |
missense |
probably damaging |
0.99 |
R8039:Agrn
|
UTSW |
4 |
156,253,468 (GRCm39) |
missense |
probably benign |
0.12 |
R8056:Agrn
|
UTSW |
4 |
156,254,868 (GRCm39) |
missense |
probably benign |
|
R8061:Agrn
|
UTSW |
4 |
156,263,411 (GRCm39) |
missense |
probably damaging |
1.00 |
R8158:Agrn
|
UTSW |
4 |
156,258,346 (GRCm39) |
missense |
probably benign |
|
R8159:Agrn
|
UTSW |
4 |
156,256,825 (GRCm39) |
missense |
probably benign |
0.27 |
R8325:Agrn
|
UTSW |
4 |
156,258,119 (GRCm39) |
missense |
probably benign |
0.01 |
R8338:Agrn
|
UTSW |
4 |
156,253,018 (GRCm39) |
missense |
probably benign |
0.01 |
R8739:Agrn
|
UTSW |
4 |
156,257,045 (GRCm39) |
missense |
probably benign |
|
R8956:Agrn
|
UTSW |
4 |
156,250,995 (GRCm39) |
missense |
probably damaging |
0.99 |
R9094:Agrn
|
UTSW |
4 |
156,253,264 (GRCm39) |
missense |
probably benign |
0.01 |
R9112:Agrn
|
UTSW |
4 |
156,261,514 (GRCm39) |
missense |
probably damaging |
1.00 |
R9384:Agrn
|
UTSW |
4 |
156,257,106 (GRCm39) |
missense |
probably damaging |
1.00 |
R9472:Agrn
|
UTSW |
4 |
156,254,841 (GRCm39) |
missense |
|
|
R9619:Agrn
|
UTSW |
4 |
156,258,490 (GRCm39) |
missense |
probably benign |
0.00 |
R9629:Agrn
|
UTSW |
4 |
156,257,094 (GRCm39) |
nonsense |
probably null |
|
R9732:Agrn
|
UTSW |
4 |
156,258,446 (GRCm39) |
missense |
probably benign |
0.13 |
R9749:Agrn
|
UTSW |
4 |
156,258,114 (GRCm39) |
missense |
probably benign |
0.02 |
R9757:Agrn
|
UTSW |
4 |
156,261,235 (GRCm39) |
missense |
probably benign |
0.03 |
R9792:Agrn
|
UTSW |
4 |
156,261,129 (GRCm39) |
missense |
probably benign |
0.09 |
R9793:Agrn
|
UTSW |
4 |
156,261,129 (GRCm39) |
missense |
probably benign |
0.09 |
Z1177:Agrn
|
UTSW |
4 |
156,264,033 (GRCm39) |
missense |
possibly damaging |
0.95 |
Z1177:Agrn
|
UTSW |
4 |
156,256,001 (GRCm39) |
nonsense |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- AAACAGAGCGGTCACCATGAGGTC -3'
(R):5'- GCTAGTGAATGTGAGCTGCATGTCC -3'
Sequencing Primer
(F):5'- GGTCTCCTTCAGAGACTGGAATC -3'
(R):5'- ATGTCCACGCCTGTACAC -3'
|
Posted On |
2014-05-23 |