Incidental Mutation 'R1768:Ttc28'
ID |
194558 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Ttc28
|
Ensembl Gene |
ENSMUSG00000033209 |
Gene Name |
tetratricopeptide repeat domain 28 |
Synonyms |
TPRBK, 2310015L07Rik |
MMRRC Submission |
039799-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R1768 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
5 |
Chromosomal Location |
111027669-111437646 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 111425034 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Isoleucine to Phenylalanine
at position 1589
(I1589F)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000137609
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000040111]
[ENSMUST00000156290]
|
AlphaFold |
Q80XJ3 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000040111
AA Change: I1620F
PolyPhen 2
Score 0.773 (Sensitivity: 0.85; Specificity: 0.92)
|
SMART Domains |
Protein: ENSMUSP00000136116 Gene: ENSMUSG00000033209 AA Change: I1620F
Domain | Start | End | E-Value | Type |
low complexity region
|
4 |
28 |
N/A |
INTRINSIC |
TPR
|
52 |
85 |
2.84e1 |
SMART |
TPR
|
86 |
119 |
5.03e-1 |
SMART |
TPR
|
120 |
153 |
2.11e-3 |
SMART |
TPR
|
268 |
301 |
8.51e0 |
SMART |
TPR
|
339 |
372 |
1.78e-1 |
SMART |
TPR
|
379 |
412 |
2.82e-4 |
SMART |
TPR
|
419 |
452 |
9.98e-5 |
SMART |
TPR
|
459 |
492 |
1.88e0 |
SMART |
TPR
|
499 |
532 |
1.11e1 |
SMART |
TPR
|
539 |
572 |
2.93e-2 |
SMART |
TPR
|
579 |
612 |
1.21e-3 |
SMART |
TPR
|
619 |
652 |
4.91e-4 |
SMART |
TPR
|
659 |
692 |
7.56e-5 |
SMART |
TPR
|
699 |
732 |
8.29e0 |
SMART |
TPR
|
739 |
772 |
1.63e0 |
SMART |
TPR
|
779 |
812 |
1.24e0 |
SMART |
TPR
|
819 |
852 |
7.98e-4 |
SMART |
TPR
|
859 |
892 |
8.74e0 |
SMART |
TPR
|
902 |
935 |
5.43e-6 |
SMART |
TPR
|
942 |
975 |
4.09e-1 |
SMART |
TPR
|
982 |
1015 |
9.98e-5 |
SMART |
TPR
|
1022 |
1055 |
7.12e-1 |
SMART |
TPR
|
1062 |
1095 |
5.69e0 |
SMART |
TPR
|
1102 |
1135 |
3.14e-2 |
SMART |
TPR
|
1142 |
1175 |
2.84e1 |
SMART |
low complexity region
|
1259 |
1277 |
N/A |
INTRINSIC |
Pfam:CHAT
|
1415 |
1738 |
7.3e-77 |
PFAM |
low complexity region
|
1972 |
1990 |
N/A |
INTRINSIC |
low complexity region
|
2014 |
2031 |
N/A |
INTRINSIC |
low complexity region
|
2033 |
2045 |
N/A |
INTRINSIC |
low complexity region
|
2155 |
2171 |
N/A |
INTRINSIC |
low complexity region
|
2283 |
2293 |
N/A |
INTRINSIC |
low complexity region
|
2327 |
2352 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000156290
AA Change: I1589F
PolyPhen 2
Score 0.773 (Sensitivity: 0.85; Specificity: 0.92)
|
SMART Domains |
Protein: ENSMUSP00000137609 Gene: ENSMUSG00000033209 AA Change: I1589F
Domain | Start | End | E-Value | Type |
low complexity region
|
4 |
28 |
N/A |
INTRINSIC |
TPR
|
52 |
85 |
2.84e1 |
SMART |
TPR
|
86 |
119 |
5.03e-1 |
SMART |
TPR
|
120 |
153 |
2.11e-3 |
SMART |
TPR
|
268 |
301 |
8.51e0 |
SMART |
TPR
|
308 |
341 |
1.78e-1 |
SMART |
TPR
|
348 |
381 |
2.82e-4 |
SMART |
TPR
|
388 |
421 |
9.98e-5 |
SMART |
TPR
|
428 |
461 |
1.88e0 |
SMART |
TPR
|
468 |
501 |
1.11e1 |
SMART |
TPR
|
508 |
541 |
2.93e-2 |
SMART |
TPR
|
548 |
581 |
1.21e-3 |
SMART |
TPR
|
588 |
621 |
4.91e-4 |
SMART |
TPR
|
628 |
661 |
7.56e-5 |
SMART |
TPR
|
668 |
701 |
8.29e0 |
SMART |
TPR
|
708 |
741 |
1.63e0 |
SMART |
TPR
|
748 |
781 |
1.24e0 |
SMART |
TPR
|
788 |
821 |
7.98e-4 |
SMART |
TPR
|
828 |
861 |
8.74e0 |
SMART |
TPR
|
871 |
904 |
5.43e-6 |
SMART |
TPR
|
911 |
944 |
4.09e-1 |
SMART |
TPR
|
951 |
984 |
9.98e-5 |
SMART |
TPR
|
991 |
1024 |
7.12e-1 |
SMART |
TPR
|
1031 |
1064 |
5.69e0 |
SMART |
TPR
|
1071 |
1104 |
3.14e-2 |
SMART |
TPR
|
1111 |
1144 |
2.84e1 |
SMART |
low complexity region
|
1228 |
1246 |
N/A |
INTRINSIC |
Pfam:CHAT
|
1384 |
1707 |
1.1e-76 |
PFAM |
low complexity region
|
1941 |
1959 |
N/A |
INTRINSIC |
low complexity region
|
1983 |
2000 |
N/A |
INTRINSIC |
low complexity region
|
2002 |
2014 |
N/A |
INTRINSIC |
low complexity region
|
2124 |
2140 |
N/A |
INTRINSIC |
low complexity region
|
2252 |
2262 |
N/A |
INTRINSIC |
low complexity region
|
2296 |
2321 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000183861
|
Meta Mutation Damage Score |
0.0639 |
Coding Region Coverage |
- 1x: 97.4%
- 3x: 96.9%
- 10x: 95.3%
- 20x: 92.4%
|
Validation Efficiency |
91% (107/117) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 112 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4921524L21Rik |
G |
C |
18: 6,623,470 (GRCm39) |
R60P |
possibly damaging |
Het |
Aox1 |
T |
A |
1: 58,393,354 (GRCm39) |
C1199S |
probably benign |
Het |
Arhgap18 |
G |
A |
10: 26,763,857 (GRCm39) |
M482I |
probably damaging |
Het |
Arhgap18 |
G |
T |
10: 26,763,858 (GRCm39) |
A483S |
probably damaging |
Het |
Arid4a |
G |
A |
12: 71,122,112 (GRCm39) |
S509N |
probably benign |
Het |
BC051019 |
T |
C |
7: 109,322,381 (GRCm39) |
T38A |
probably benign |
Het |
Bcam |
T |
C |
7: 19,499,543 (GRCm39) |
N192S |
probably null |
Het |
Bend5 |
A |
T |
4: 111,311,438 (GRCm39) |
K351* |
probably null |
Het |
Bicdl2 |
T |
A |
17: 23,884,923 (GRCm39) |
M208K |
probably damaging |
Het |
Ccp110 |
A |
T |
7: 118,325,247 (GRCm39) |
|
probably null |
Het |
Cdc6 |
A |
T |
11: 98,803,043 (GRCm39) |
T328S |
probably damaging |
Het |
Cdk5rap2 |
G |
T |
4: 70,225,470 (GRCm39) |
N558K |
probably benign |
Het |
Cdkn1c |
C |
T |
7: 143,012,858 (GRCm39) |
R146K |
probably benign |
Het |
Ceacam18 |
G |
A |
7: 43,297,918 (GRCm39) |
C371Y |
probably benign |
Het |
Cep95 |
T |
A |
11: 106,697,177 (GRCm39) |
C233* |
probably null |
Het |
Chrnd |
A |
G |
1: 87,122,650 (GRCm39) |
I144V |
probably benign |
Het |
Col6a4 |
T |
A |
9: 105,957,299 (GRCm39) |
Q175L |
probably benign |
Het |
Cym |
A |
T |
3: 107,120,816 (GRCm39) |
V263E |
probably damaging |
Het |
Cyp2a4 |
G |
T |
7: 26,012,197 (GRCm39) |
V327F |
possibly damaging |
Het |
Dhx29 |
T |
A |
13: 113,084,774 (GRCm39) |
M664K |
probably damaging |
Het |
Dlec1 |
T |
G |
9: 118,975,075 (GRCm39) |
|
probably null |
Het |
Dna2 |
T |
C |
10: 62,792,863 (GRCm39) |
Y293H |
probably benign |
Het |
Dnase1l3 |
T |
A |
14: 7,974,104 (GRCm38) |
N196Y |
probably damaging |
Het |
Eea1 |
T |
A |
10: 95,832,822 (GRCm39) |
D222E |
probably damaging |
Het |
Efcab14 |
A |
T |
4: 115,610,116 (GRCm39) |
|
probably null |
Het |
Entpd5 |
C |
T |
12: 84,432,985 (GRCm39) |
R189H |
probably benign |
Het |
Exoc4 |
A |
T |
6: 33,734,985 (GRCm39) |
K534M |
probably damaging |
Het |
Extl1 |
T |
A |
4: 134,098,449 (GRCm39) |
Y194F |
probably benign |
Het |
Eya1 |
A |
G |
1: 14,323,299 (GRCm39) |
L161S |
possibly damaging |
Het |
Fam163b |
T |
C |
2: 27,002,874 (GRCm39) |
E41G |
possibly damaging |
Het |
Fam180a |
A |
C |
6: 35,292,287 (GRCm39) |
S40A |
probably benign |
Het |
Fbxl4 |
T |
C |
4: 22,385,950 (GRCm39) |
S186P |
probably benign |
Het |
Fbxw19 |
A |
T |
9: 109,323,840 (GRCm39) |
L45* |
probably null |
Het |
Fgf14 |
G |
T |
14: 124,913,924 (GRCm39) |
T69N |
probably benign |
Het |
Flt1 |
A |
G |
5: 147,609,519 (GRCm39) |
Y432H |
probably damaging |
Het |
Frmd4b |
A |
T |
6: 97,283,725 (GRCm39) |
L374Q |
possibly damaging |
Het |
G6pc2 |
T |
A |
2: 69,053,321 (GRCm39) |
V125D |
probably damaging |
Het |
Gm10033 |
T |
C |
8: 69,826,210 (GRCm39) |
I119M |
unknown |
Het |
Gna15 |
A |
T |
10: 81,347,954 (GRCm39) |
L164Q |
probably damaging |
Het |
Gnaz |
C |
A |
10: 74,827,702 (GRCm39) |
D151E |
possibly damaging |
Het |
Has1 |
T |
C |
17: 18,070,562 (GRCm39) |
T120A |
probably benign |
Het |
Hectd4 |
T |
A |
5: 121,496,366 (GRCm39) |
D3919E |
possibly damaging |
Het |
Hs3st5 |
A |
G |
10: 36,709,165 (GRCm39) |
I233M |
probably benign |
Het |
Ilf3 |
T |
C |
9: 21,314,438 (GRCm39) |
|
probably benign |
Het |
Inpp5b |
T |
A |
4: 124,687,069 (GRCm39) |
L765* |
probably null |
Het |
Insr |
A |
T |
8: 3,209,561 (GRCm39) |
I1174N |
probably damaging |
Het |
Kash5 |
T |
A |
7: 44,838,227 (GRCm39) |
|
probably null |
Het |
Kcnq3 |
A |
G |
15: 65,877,755 (GRCm39) |
L445P |
probably damaging |
Het |
Kctd20 |
A |
T |
17: 29,181,824 (GRCm39) |
N159Y |
probably damaging |
Het |
Kctd20 |
A |
T |
17: 29,185,755 (GRCm39) |
D366V |
probably damaging |
Het |
Klk15 |
T |
C |
7: 43,587,757 (GRCm39) |
|
probably benign |
Het |
Lama4 |
T |
G |
10: 38,979,497 (GRCm39) |
N1658K |
possibly damaging |
Het |
Lonrf2 |
G |
A |
1: 38,852,357 (GRCm39) |
P165S |
probably benign |
Het |
Mas1 |
T |
C |
17: 13,060,586 (GRCm39) |
Y279C |
probably damaging |
Het |
Mast2 |
G |
T |
4: 116,164,156 (GRCm39) |
D1747E |
probably damaging |
Het |
Mest |
G |
A |
6: 30,745,138 (GRCm39) |
M235I |
probably benign |
Het |
Mfsd6 |
A |
G |
1: 52,699,964 (GRCm39) |
|
probably null |
Het |
Mllt10 |
T |
A |
2: 18,167,657 (GRCm39) |
S449R |
probably damaging |
Het |
Mon2 |
T |
A |
10: 122,849,668 (GRCm39) |
T1211S |
probably benign |
Het |
Mrnip |
G |
A |
11: 50,067,688 (GRCm39) |
C27Y |
probably damaging |
Het |
Myh15 |
A |
T |
16: 48,983,498 (GRCm39) |
T1538S |
probably benign |
Het |
Nfatc2ip |
A |
G |
7: 125,989,634 (GRCm39) |
V250A |
probably benign |
Het |
Npy1r |
A |
G |
8: 67,157,177 (GRCm39) |
D199G |
possibly damaging |
Het |
Numbl |
A |
G |
7: 26,980,379 (GRCm39) |
T454A |
probably benign |
Het |
Nutm2 |
T |
G |
13: 50,627,152 (GRCm39) |
F436V |
probably damaging |
Het |
Opa1 |
T |
C |
16: 29,439,628 (GRCm39) |
S773P |
probably benign |
Het |
Or12e1 |
T |
A |
2: 87,022,042 (GRCm39) |
S4T |
probably benign |
Het |
Or2d3 |
A |
T |
7: 106,491,184 (GRCm39) |
|
probably null |
Het |
Or2d3 |
G |
T |
7: 106,491,185 (GRCm39) |
L44M |
probably damaging |
Het |
Or2r11 |
A |
G |
6: 42,437,611 (GRCm39) |
L114S |
probably damaging |
Het |
Or2t48 |
A |
G |
11: 58,420,602 (GRCm39) |
L70P |
probably damaging |
Het |
Or51b17 |
A |
G |
7: 103,542,484 (GRCm39) |
S153P |
probably benign |
Het |
Or51m1 |
C |
T |
7: 103,578,932 (GRCm39) |
R301* |
probably null |
Het |
Or52e7 |
A |
G |
7: 104,685,157 (GRCm39) |
S251G |
probably benign |
Het |
Or52i2 |
A |
G |
7: 102,319,508 (GRCm39) |
Y127C |
probably damaging |
Het |
Or8b12c |
T |
A |
9: 37,715,599 (GRCm39) |
Y131N |
probably damaging |
Het |
Pde8a |
G |
C |
7: 80,950,471 (GRCm39) |
|
probably null |
Het |
Pgam1 |
T |
C |
19: 41,906,144 (GRCm39) |
F232S |
probably damaging |
Het |
Pgk1 |
T |
A |
X: 105,243,914 (GRCm39) |
V303E |
possibly damaging |
Het |
Pirb |
A |
T |
7: 3,720,189 (GRCm39) |
C395S |
probably damaging |
Het |
Plxnc1 |
C |
T |
10: 94,680,184 (GRCm39) |
V824I |
probably benign |
Het |
Ppp6r1 |
A |
G |
7: 4,636,691 (GRCm39) |
|
probably null |
Het |
Rapgef4 |
C |
A |
2: 72,056,131 (GRCm39) |
|
probably benign |
Het |
Rars1 |
T |
A |
11: 35,700,465 (GRCm39) |
T539S |
probably damaging |
Het |
Rbm44 |
G |
T |
1: 91,081,679 (GRCm39) |
|
probably null |
Het |
Samd4b |
A |
G |
7: 28,113,317 (GRCm39) |
I216T |
probably benign |
Het |
Serpine2 |
A |
C |
1: 79,794,532 (GRCm39) |
F134V |
probably damaging |
Het |
Shmt1 |
A |
G |
11: 60,683,790 (GRCm39) |
Y341H |
probably damaging |
Het |
Slc23a2 |
C |
A |
2: 131,917,561 (GRCm39) |
V226F |
probably benign |
Het |
Slc23a4 |
A |
G |
6: 34,933,896 (GRCm39) |
I69T |
probably damaging |
Het |
Slc37a1 |
C |
A |
17: 31,552,652 (GRCm39) |
T319K |
possibly damaging |
Het |
Slc6a4 |
A |
T |
11: 76,904,078 (GRCm39) |
T178S |
probably damaging |
Het |
Smarca4 |
G |
A |
9: 21,612,479 (GRCm39) |
A1588T |
possibly damaging |
Het |
Spag17 |
A |
T |
3: 99,934,668 (GRCm39) |
Y650F |
possibly damaging |
Het |
Stab2 |
C |
T |
10: 86,838,872 (GRCm39) |
G65S |
probably damaging |
Het |
Stambpl1 |
C |
G |
19: 34,204,121 (GRCm39) |
N70K |
probably damaging |
Het |
Stip1 |
C |
A |
19: 6,999,165 (GRCm39) |
C471F |
probably damaging |
Het |
Taf1 |
T |
C |
X: 100,584,500 (GRCm39) |
S223P |
probably benign |
Het |
Tchh |
C |
A |
3: 93,350,882 (GRCm39) |
N107K |
possibly damaging |
Het |
Tenm3 |
A |
C |
8: 48,685,139 (GRCm39) |
H2432Q |
probably damaging |
Het |
Tmem243 |
A |
G |
5: 9,168,548 (GRCm39) |
N110S |
probably damaging |
Het |
Toe1 |
A |
T |
4: 116,662,076 (GRCm39) |
I306F |
probably benign |
Het |
Trank1 |
G |
A |
9: 111,221,995 (GRCm39) |
V2911M |
probably damaging |
Het |
Trpm4 |
A |
G |
7: 44,958,036 (GRCm39) |
I811T |
probably damaging |
Het |
Tspear |
T |
A |
10: 77,710,950 (GRCm39) |
|
probably null |
Het |
Tubgcp3 |
A |
G |
8: 12,699,686 (GRCm39) |
|
probably benign |
Het |
U2af2 |
C |
A |
7: 5,070,544 (GRCm39) |
R78S |
probably benign |
Het |
Wdr17 |
A |
T |
8: 55,126,689 (GRCm39) |
D388E |
possibly damaging |
Het |
Wdr3 |
A |
T |
3: 100,061,186 (GRCm39) |
S261T |
probably benign |
Het |
Zfp667 |
A |
G |
7: 6,308,066 (GRCm39) |
N245D |
possibly damaging |
Het |
Zfp692 |
A |
G |
11: 58,201,002 (GRCm39) |
|
probably benign |
Het |
Zfp729a |
T |
C |
13: 67,767,370 (GRCm39) |
H953R |
probably benign |
Het |
|
Other mutations in Ttc28 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00516:Ttc28
|
APN |
5 |
111,373,554 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00963:Ttc28
|
APN |
5 |
111,434,255 (GRCm39) |
nonsense |
probably null |
|
IGL00969:Ttc28
|
APN |
5 |
111,373,606 (GRCm39) |
missense |
probably benign |
0.00 |
IGL01366:Ttc28
|
APN |
5 |
111,233,037 (GRCm39) |
critical splice donor site |
probably null |
|
IGL01528:Ttc28
|
APN |
5 |
111,249,826 (GRCm39) |
splice site |
probably benign |
|
IGL01558:Ttc28
|
APN |
5 |
111,431,828 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01973:Ttc28
|
APN |
5 |
111,372,101 (GRCm39) |
missense |
possibly damaging |
0.88 |
IGL02040:Ttc28
|
APN |
5 |
111,040,802 (GRCm39) |
nonsense |
probably null |
|
IGL02432:Ttc28
|
APN |
5 |
111,371,101 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02531:Ttc28
|
APN |
5 |
111,373,716 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02819:Ttc28
|
APN |
5 |
111,414,449 (GRCm39) |
missense |
probably benign |
|
IGL02830:Ttc28
|
APN |
5 |
111,434,105 (GRCm39) |
missense |
probably benign |
0.10 |
IGL02893:Ttc28
|
APN |
5 |
111,433,251 (GRCm39) |
missense |
possibly damaging |
0.87 |
IGL03387:Ttc28
|
APN |
5 |
111,381,208 (GRCm39) |
missense |
probably benign |
0.07 |
PIT4131001:Ttc28
|
UTSW |
5 |
111,040,719 (GRCm39) |
missense |
probably benign |
0.00 |
R0142:Ttc28
|
UTSW |
5 |
111,425,323 (GRCm39) |
missense |
probably benign |
0.40 |
R0166:Ttc28
|
UTSW |
5 |
111,373,500 (GRCm39) |
missense |
probably benign |
0.01 |
R0328:Ttc28
|
UTSW |
5 |
111,431,933 (GRCm39) |
splice site |
probably benign |
|
R0582:Ttc28
|
UTSW |
5 |
111,331,162 (GRCm39) |
missense |
probably damaging |
1.00 |
R0744:Ttc28
|
UTSW |
5 |
111,378,947 (GRCm39) |
missense |
probably damaging |
1.00 |
R0811:Ttc28
|
UTSW |
5 |
111,383,366 (GRCm39) |
missense |
probably benign |
0.24 |
R0812:Ttc28
|
UTSW |
5 |
111,383,366 (GRCm39) |
missense |
probably benign |
0.24 |
R0828:Ttc28
|
UTSW |
5 |
111,371,312 (GRCm39) |
missense |
probably damaging |
1.00 |
R0833:Ttc28
|
UTSW |
5 |
111,378,947 (GRCm39) |
missense |
probably damaging |
1.00 |
R1013:Ttc28
|
UTSW |
5 |
111,424,831 (GRCm39) |
missense |
probably benign |
0.01 |
R1168:Ttc28
|
UTSW |
5 |
111,378,977 (GRCm39) |
missense |
probably damaging |
1.00 |
R1194:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1195:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1195:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1195:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1196:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1205:Ttc28
|
UTSW |
5 |
111,433,635 (GRCm39) |
missense |
probably benign |
0.04 |
R1386:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1467:Ttc28
|
UTSW |
5 |
111,433,254 (GRCm39) |
missense |
probably benign |
0.00 |
R1467:Ttc28
|
UTSW |
5 |
111,433,254 (GRCm39) |
missense |
probably benign |
0.00 |
R1537:Ttc28
|
UTSW |
5 |
111,433,184 (GRCm39) |
missense |
probably damaging |
0.96 |
R1539:Ttc28
|
UTSW |
5 |
111,248,677 (GRCm39) |
missense |
possibly damaging |
0.77 |
R1558:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1560:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1561:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1566:Ttc28
|
UTSW |
5 |
111,373,543 (GRCm39) |
missense |
probably damaging |
1.00 |
R1775:Ttc28
|
UTSW |
5 |
111,424,677 (GRCm39) |
missense |
probably benign |
0.00 |
R1909:Ttc28
|
UTSW |
5 |
111,431,920 (GRCm39) |
critical splice donor site |
probably null |
|
R1911:Ttc28
|
UTSW |
5 |
111,428,616 (GRCm39) |
missense |
possibly damaging |
0.93 |
R1970:Ttc28
|
UTSW |
5 |
111,383,501 (GRCm39) |
missense |
probably benign |
0.00 |
R1990:Ttc28
|
UTSW |
5 |
111,424,188 (GRCm39) |
missense |
probably benign |
0.37 |
R1992:Ttc28
|
UTSW |
5 |
111,424,188 (GRCm39) |
missense |
probably benign |
0.37 |
R2066:Ttc28
|
UTSW |
5 |
111,373,799 (GRCm39) |
missense |
probably benign |
0.01 |
R2112:Ttc28
|
UTSW |
5 |
111,424,139 (GRCm39) |
missense |
probably damaging |
0.99 |
R2158:Ttc28
|
UTSW |
5 |
111,325,483 (GRCm39) |
intron |
probably benign |
|
R2192:Ttc28
|
UTSW |
5 |
111,371,362 (GRCm39) |
missense |
probably damaging |
0.99 |
R2267:Ttc28
|
UTSW |
5 |
111,373,869 (GRCm39) |
missense |
possibly damaging |
0.75 |
R2384:Ttc28
|
UTSW |
5 |
111,424,074 (GRCm39) |
missense |
possibly damaging |
0.95 |
R2989:Ttc28
|
UTSW |
5 |
111,371,881 (GRCm39) |
missense |
probably benign |
0.29 |
R3881:Ttc28
|
UTSW |
5 |
111,331,106 (GRCm39) |
missense |
probably damaging |
1.00 |
R3919:Ttc28
|
UTSW |
5 |
111,433,245 (GRCm39) |
missense |
possibly damaging |
0.80 |
R4455:Ttc28
|
UTSW |
5 |
111,371,924 (GRCm39) |
frame shift |
probably null |
|
R4456:Ttc28
|
UTSW |
5 |
111,371,924 (GRCm39) |
frame shift |
probably null |
|
R4522:Ttc28
|
UTSW |
5 |
111,428,038 (GRCm39) |
missense |
probably benign |
0.01 |
R4548:Ttc28
|
UTSW |
5 |
111,419,090 (GRCm39) |
missense |
possibly damaging |
0.86 |
R4591:Ttc28
|
UTSW |
5 |
111,371,147 (GRCm39) |
missense |
probably damaging |
1.00 |
R4633:Ttc28
|
UTSW |
5 |
111,371,867 (GRCm39) |
missense |
probably damaging |
1.00 |
R4700:Ttc28
|
UTSW |
5 |
111,424,909 (GRCm39) |
missense |
probably damaging |
1.00 |
R4714:Ttc28
|
UTSW |
5 |
111,433,095 (GRCm39) |
missense |
possibly damaging |
0.65 |
R4790:Ttc28
|
UTSW |
5 |
111,372,083 (GRCm39) |
missense |
possibly damaging |
0.94 |
R4803:Ttc28
|
UTSW |
5 |
111,425,329 (GRCm39) |
missense |
possibly damaging |
0.90 |
R4840:Ttc28
|
UTSW |
5 |
111,433,947 (GRCm39) |
missense |
probably damaging |
1.00 |
R4969:Ttc28
|
UTSW |
5 |
111,424,121 (GRCm39) |
missense |
probably damaging |
0.96 |
R5019:Ttc28
|
UTSW |
5 |
111,249,930 (GRCm39) |
missense |
possibly damaging |
0.47 |
R5130:Ttc28
|
UTSW |
5 |
111,040,722 (GRCm39) |
missense |
probably benign |
|
R5150:Ttc28
|
UTSW |
5 |
111,373,555 (GRCm39) |
missense |
probably damaging |
1.00 |
R5214:Ttc28
|
UTSW |
5 |
111,325,489 (GRCm39) |
intron |
probably benign |
|
R5254:Ttc28
|
UTSW |
5 |
111,419,104 (GRCm39) |
missense |
probably benign |
0.01 |
R5518:Ttc28
|
UTSW |
5 |
111,373,794 (GRCm39) |
missense |
probably benign |
0.17 |
R5851:Ttc28
|
UTSW |
5 |
111,383,335 (GRCm39) |
splice site |
probably benign |
|
R5931:Ttc28
|
UTSW |
5 |
111,232,975 (GRCm39) |
missense |
possibly damaging |
0.81 |
R6011:Ttc28
|
UTSW |
5 |
111,434,309 (GRCm39) |
missense |
probably benign |
|
R6176:Ttc28
|
UTSW |
5 |
111,371,851 (GRCm39) |
missense |
probably damaging |
1.00 |
R6221:Ttc28
|
UTSW |
5 |
111,419,114 (GRCm39) |
missense |
probably benign |
0.00 |
R6398:Ttc28
|
UTSW |
5 |
111,424,142 (GRCm39) |
missense |
probably damaging |
1.00 |
R6717:Ttc28
|
UTSW |
5 |
111,433,302 (GRCm39) |
missense |
probably benign |
|
R6770:Ttc28
|
UTSW |
5 |
111,434,006 (GRCm39) |
missense |
probably damaging |
1.00 |
R6901:Ttc28
|
UTSW |
5 |
111,424,891 (GRCm39) |
missense |
possibly damaging |
0.88 |
R7038:Ttc28
|
UTSW |
5 |
111,414,445 (GRCm39) |
missense |
probably benign |
0.09 |
R7073:Ttc28
|
UTSW |
5 |
111,371,282 (GRCm39) |
missense |
possibly damaging |
0.96 |
R7101:Ttc28
|
UTSW |
5 |
111,232,958 (GRCm39) |
missense |
probably damaging |
1.00 |
R7135:Ttc28
|
UTSW |
5 |
111,427,873 (GRCm39) |
missense |
probably damaging |
1.00 |
R7350:Ttc28
|
UTSW |
5 |
111,373,903 (GRCm39) |
missense |
probably damaging |
0.97 |
R7454:Ttc28
|
UTSW |
5 |
111,433,350 (GRCm39) |
missense |
probably benign |
0.19 |
R7461:Ttc28
|
UTSW |
5 |
111,371,995 (GRCm39) |
missense |
probably damaging |
1.00 |
R7596:Ttc28
|
UTSW |
5 |
111,427,990 (GRCm39) |
missense |
probably damaging |
1.00 |
R7613:Ttc28
|
UTSW |
5 |
111,371,995 (GRCm39) |
missense |
probably damaging |
1.00 |
R7625:Ttc28
|
UTSW |
5 |
111,433,085 (GRCm39) |
missense |
possibly damaging |
0.65 |
R7648:Ttc28
|
UTSW |
5 |
111,331,258 (GRCm39) |
missense |
possibly damaging |
0.52 |
R7735:Ttc28
|
UTSW |
5 |
111,414,544 (GRCm39) |
splice site |
probably null |
|
R8030:Ttc28
|
UTSW |
5 |
111,433,922 (GRCm39) |
missense |
possibly damaging |
0.81 |
R8205:Ttc28
|
UTSW |
5 |
111,373,596 (GRCm39) |
missense |
possibly damaging |
0.95 |
R8246:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8247:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8269:Ttc28
|
UTSW |
5 |
111,425,325 (GRCm39) |
missense |
probably benign |
0.09 |
R8292:Ttc28
|
UTSW |
5 |
111,371,123 (GRCm39) |
missense |
probably damaging |
1.00 |
R8346:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8356:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8423:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8424:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8426:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8441:Ttc28
|
UTSW |
5 |
111,325,507 (GRCm39) |
nonsense |
probably null |
|
R8494:Ttc28
|
UTSW |
5 |
111,383,506 (GRCm39) |
missense |
probably damaging |
0.96 |
R8508:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8510:Ttc28
|
UTSW |
5 |
111,381,207 (GRCm39) |
missense |
probably benign |
0.33 |
R8729:Ttc28
|
UTSW |
5 |
111,383,509 (GRCm39) |
critical splice donor site |
probably null |
|
R8845:Ttc28
|
UTSW |
5 |
111,372,041 (GRCm39) |
missense |
probably benign |
0.11 |
R9003:Ttc28
|
UTSW |
5 |
111,424,896 (GRCm39) |
missense |
probably benign |
0.00 |
R9185:Ttc28
|
UTSW |
5 |
111,371,342 (GRCm39) |
missense |
probably benign |
0.03 |
R9187:Ttc28
|
UTSW |
5 |
111,249,902 (GRCm39) |
missense |
probably damaging |
1.00 |
R9245:Ttc28
|
UTSW |
5 |
111,325,525 (GRCm39) |
missense |
unknown |
|
R9251:Ttc28
|
UTSW |
5 |
111,040,698 (GRCm39) |
missense |
possibly damaging |
0.47 |
R9372:Ttc28
|
UTSW |
5 |
111,331,073 (GRCm39) |
missense |
probably benign |
0.25 |
R9466:Ttc28
|
UTSW |
5 |
111,330,895 (GRCm39) |
missense |
probably damaging |
0.99 |
R9563:Ttc28
|
UTSW |
5 |
111,371,092 (GRCm39) |
missense |
probably benign |
0.22 |
R9606:Ttc28
|
UTSW |
5 |
111,433,140 (GRCm39) |
missense |
probably benign |
0.00 |
R9691:Ttc28
|
UTSW |
5 |
111,431,879 (GRCm39) |
missense |
probably benign |
0.01 |
R9709:Ttc28
|
UTSW |
5 |
111,433,637 (GRCm39) |
missense |
probably damaging |
0.97 |
V8831:Ttc28
|
UTSW |
5 |
111,248,578 (GRCm39) |
missense |
probably benign |
0.11 |
Z1088:Ttc28
|
UTSW |
5 |
111,434,181 (GRCm39) |
missense |
probably benign |
0.00 |
Z1176:Ttc28
|
UTSW |
5 |
111,414,432 (GRCm39) |
missense |
possibly damaging |
0.59 |
Z1177:Ttc28
|
UTSW |
5 |
111,433,605 (GRCm39) |
missense |
probably benign |
0.10 |
Z1177:Ttc28
|
UTSW |
5 |
111,426,452 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TCACAGTGTCACCTGAGGAAGACC -3'
(R):5'- GCGTGAACGAACATCTTGGAAGCC -3'
Sequencing Primer
(F):5'- AGCATTCATGGTGTCAGAGC -3'
(R):5'- ATCTTGGAAGCCGCGAC -3'
|
Posted On |
2014-05-23 |