Incidental Mutation 'R1782:Cfap57'
ID 195369
Institutional Source Beutler Lab
Gene Symbol Cfap57
Ensembl Gene ENSMUSG00000028730
Gene Name cilia and flagella associated protein 57
Synonyms Wdr65, 1110020C03Rik, C130004B06Rik, LOC384050
MMRRC Submission 039813-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R1782 (G1)
Quality Score 225
Status Not validated
Chromosome 4
Chromosomal Location 118554551-118620777 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) C to A at 118614975 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Arginine to Leucine at position 69 (R69L)
Ref Sequence ENSEMBL: ENSMUSP00000080592 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000071972] [ENSMUST00000081921]
AlphaFold Q9D180
Predicted Effect probably damaging
Transcript: ENSMUST00000071972
AA Change: R69L

PolyPhen 2 Score 0.983 (Sensitivity: 0.75; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000071863
Gene: ENSMUSG00000028730
AA Change: R69L

DomainStartEndE-ValueType
Blast:WD40 44 88 3e-12 BLAST
Blast:WD40 95 137 1e-9 BLAST
WD40 140 181 1.77e2 SMART
internal_repeat_1 182 237 7.23e-5 PROSPERO
WD40 329 365 1.27e2 SMART
WD40 376 416 3.4e-2 SMART
WD40 418 456 1.59e1 SMART
Blast:WD40 461 497 4e-18 BLAST
WD40 500 539 9.67e-7 SMART
WD40 544 581 3.96e1 SMART
Blast:WD40 582 621 8e-16 BLAST
WD40 626 665 3.21e-1 SMART
coiled coil region 690 1056 N/A INTRINSIC
coiled coil region 1094 1166 N/A INTRINSIC
coiled coil region 1197 1222 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000081921
AA Change: R69L

PolyPhen 2 Score 0.983 (Sensitivity: 0.75; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000080592
Gene: ENSMUSG00000028730
AA Change: R69L

DomainStartEndE-ValueType
Blast:WD40 44 88 3e-12 BLAST
Blast:WD40 95 137 1e-9 BLAST
WD40 140 181 1.77e2 SMART
internal_repeat_1 182 237 7.23e-5 PROSPERO
WD40 329 365 1.27e2 SMART
WD40 376 416 3.4e-2 SMART
WD40 418 456 1.59e1 SMART
Blast:WD40 461 497 4e-18 BLAST
WD40 500 539 9.67e-7 SMART
WD40 544 581 3.96e1 SMART
Blast:WD40 582 621 8e-16 BLAST
WD40 626 665 3.21e-1 SMART
coiled coil region 690 1056 N/A INTRINSIC
coiled coil region 1094 1166 N/A INTRINSIC
coiled coil region 1197 1222 N/A INTRINSIC
Coding Region Coverage
  • 1x: 97.4%
  • 3x: 96.8%
  • 10x: 95.2%
  • 20x: 92.3%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This protein encoded by this gene belongs to the WD repeat-containing family of proteins, which function in the formation of protein-protein complexes in a variety of biological pathways. This family member is thought to function in craniofacial development, possibly in the fusion of lip and palate. A missense mutation in this gene is associated with Van der Woude syndrome 2. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Aug 2011]
Allele List at MGI
Other mutations in this stock
Total: 88 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4921501E09Rik T C 17: 33,067,688 (GRCm38) I47V probably benign Het
9330182L06Rik A T 5: 9,421,620 (GRCm38) K320N possibly damaging Het
Abca13 A T 11: 9,297,971 (GRCm38) T2573S probably benign Het
Adgra3 G T 5: 49,972,062 (GRCm38) T738K probably benign Het
Adgrl4 C T 3: 151,542,805 (GRCm38) Q705* probably null Het
Atp2b1 T G 10: 99,003,201 (GRCm38) D630E probably benign Het
Atp2c1 G A 9: 105,431,587 (GRCm38) R577C probably damaging Het
Atp9b A G 18: 80,765,922 (GRCm38) V211A probably damaging Het
C8g T A 2: 25,499,082 (GRCm38) D163V possibly damaging Het
Catsper1 T C 19: 5,335,909 (GRCm38) Y57H probably benign Het
Ccdc25 C T 14: 65,854,148 (GRCm38) A72V probably benign Het
Cdca2 T G 14: 67,677,811 (GRCm38) E666D probably benign Het
Cdh23 G A 10: 60,488,542 (GRCm38) T313I probably damaging Het
Chat C A 14: 32,408,987 (GRCm38) V566L probably damaging Het
Cntn3 T C 6: 102,273,811 (GRCm38) I259V probably damaging Het
Cog1 A G 11: 113,653,966 (GRCm38) T325A probably benign Het
Cxcl10 A G 5: 92,347,803 (GRCm38) *94Q probably null Het
Cyp4a12b T C 4: 115,433,981 (GRCm38) Y369H probably damaging Het
Dhx33 T C 11: 71,001,640 (GRCm38) Y101C probably damaging Het
Dock6 A G 9: 21,811,846 (GRCm38) M1593T probably damaging Het
Dpy19l3 T C 7: 35,708,155 (GRCm38) T488A possibly damaging Het
Fam198b T C 3: 79,886,531 (GRCm38) L102S possibly damaging Het
Fbxw14 A G 9: 109,278,691 (GRCm38) I205T possibly damaging Het
Fbxw7 T C 3: 84,903,819 (GRCm38) F84L probably benign Het
Flii T C 11: 60,714,636 (GRCm38) T1212A probably benign Het
Fosl1 T A 19: 5,450,182 (GRCm38) I43N probably damaging Het
Gabrr2 G A 4: 33,085,593 (GRCm38) A338T probably damaging Het
Gatad2b T C 3: 90,341,871 (GRCm38) V72A probably benign Het
Gorasp1 G T 9: 119,932,822 (GRCm38) N48K probably damaging Het
Gramd1b C A 9: 40,413,337 (GRCm38) D139Y probably damaging Het
Gtf3c1 A T 7: 125,667,074 (GRCm38) V1030E probably damaging Het
H2afy A T 13: 56,074,321 (GRCm38) M339K probably damaging Het
Havcr2 C T 11: 46,455,017 (GRCm38) T6I unknown Het
Hgs A G 11: 120,478,505 (GRCm38) E340G probably damaging Het
Irx2 A G 13: 72,631,466 (GRCm38) T290A probably benign Het
Itgb8 T A 12: 119,192,118 (GRCm38) I200F probably damaging Het
Josd2 A G 7: 44,471,153 (GRCm38) I105V probably damaging Het
Kcnh7 T A 2: 62,736,169 (GRCm38) D806V probably damaging Het
Kctd8 A G 5: 69,340,976 (GRCm38) V109A possibly damaging Het
Kmt2d T A 15: 98,857,548 (GRCm38) probably benign Het
Krtap2-4 A T 11: 99,614,527 (GRCm38) V86E probably damaging Het
Lgr6 C G 1: 134,987,979 (GRCm38) V344L probably damaging Het
Lime1 A T 2: 181,383,056 (GRCm38) R168W possibly damaging Het
Magel2 C T 7: 62,380,857 (GRCm38) Q1170* probably null Het
Ndufaf3 A T 9: 108,566,011 (GRCm38) I169N probably damaging Het
Neb T A 2: 52,284,345 (GRCm38) K1501* probably null Het
Nim1k A T 13: 119,712,151 (GRCm38) S402R probably benign Het
Nt5dc2 T G 14: 31,138,201 (GRCm38) S395R probably damaging Het
Oaz2 G T 9: 65,688,861 (GRCm38) V132L probably benign Het
Olfr1089 T C 2: 86,732,682 (GRCm38) K310R probably benign Het
Olfr1457 T A 19: 13,094,803 (GRCm38) I282F probably damaging Het
Olfr315 T A 11: 58,778,805 (GRCm38) L226H probably damaging Het
Olfr723 A T 14: 49,928,639 (GRCm38) W302R probably benign Het
Olfr843 C T 9: 19,248,581 (GRCm38) V273I probably benign Het
Pfkl A G 10: 77,988,720 (GRCm38) V717A probably benign Het
Phgdh C T 3: 98,320,747 (GRCm38) V231I probably damaging Het
Pkhd1 A T 1: 20,565,711 (GRCm38) M465K probably damaging Het
Ppp3r1 A G 11: 17,198,281 (GRCm38) H163R probably benign Het
Prune2 T A 19: 17,122,173 (GRCm38) N1680K probably benign Het
Puf60 T A 15: 76,071,875 (GRCm38) I216L probably benign Het
Rev3l T A 10: 39,799,885 (GRCm38) N190K probably benign Het
Rp1 G A 1: 4,349,089 (GRCm38) S600L probably benign Het
Rpl3l A G 17: 24,733,456 (GRCm38) I217V probably benign Het
Scly T A 1: 91,308,380 (GRCm38) V194D probably damaging Het
Scnn1b A G 7: 121,917,961 (GRCm38) T607A probably benign Het
Slc13a3 G A 2: 165,445,519 (GRCm38) L172F probably benign Het
Sorbs2 A G 8: 45,805,696 (GRCm38) Y1090C probably damaging Het
Spag17 T A 3: 100,010,754 (GRCm38) M351K probably benign Het
St14 A G 9: 31,100,164 (GRCm38) Y444H probably damaging Het
Taf8 C A 17: 47,498,211 (GRCm38) A109S probably benign Het
Tbc1d30 T A 10: 121,267,620 (GRCm38) K502N probably damaging Het
Them5 T C 3: 94,344,489 (GRCm38) S136P probably benign Het
Tmem248 T A 5: 130,231,928 (GRCm38) N111K probably damaging Het
Tmem74 C A 15: 43,866,952 (GRCm38) V232L probably damaging Het
Tnip2 A T 5: 34,499,668 (GRCm38) H264Q probably benign Het
Trim5 A G 7: 104,265,816 (GRCm38) probably null Het
Trim63 A G 4: 134,323,038 (GRCm38) Q211R probably benign Het
Trrap T C 5: 144,822,703 (GRCm38) V2231A possibly damaging Het
Ttn T C 2: 76,735,487 (GRCm38) S28174G probably benign Het
Ugt2b36 T C 5: 87,081,581 (GRCm38) D341G possibly damaging Het
Uroc1 G A 6: 90,336,919 (GRCm38) E63K probably damaging Het
Ush2a T C 1: 188,911,185 (GRCm38) V4248A probably benign Het
Usp1 A G 4: 98,934,198 (GRCm38) H583R probably damaging Het
Usp8 T A 2: 126,720,051 (GRCm38) F55Y probably damaging Het
Vmn2r13 T A 5: 109,158,174 (GRCm38) T513S probably benign Het
Wdr73 T C 7: 80,891,778 (GRCm38) T339A probably damaging Het
Wnt2 T A 6: 18,008,640 (GRCm38) N266I possibly damaging Het
Wwp2 AGAACT A 8: 107,506,399 (GRCm38) probably null Het
Other mutations in Cfap57
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00502:Cfap57 APN 4 118,581,001 (GRCm38) missense probably benign 0.01
IGL00508:Cfap57 APN 4 118,581,170 (GRCm38) splice site probably null
IGL00857:Cfap57 APN 4 118,612,923 (GRCm38) critical splice donor site probably null
IGL01147:Cfap57 APN 4 118,589,001 (GRCm38) missense probably damaging 0.97
IGL01396:Cfap57 APN 4 118,610,595 (GRCm38) missense probably damaging 1.00
IGL01420:Cfap57 APN 4 118,612,940 (GRCm38) missense probably benign 0.21
IGL01615:Cfap57 APN 4 118,600,796 (GRCm38) missense probably damaging 1.00
IGL02154:Cfap57 APN 4 118,613,017 (GRCm38) missense probably damaging 1.00
IGL02161:Cfap57 APN 4 118,579,372 (GRCm38) missense possibly damaging 0.75
IGL02481:Cfap57 APN 4 118,581,105 (GRCm38) missense probably damaging 1.00
IGL02483:Cfap57 APN 4 118,581,105 (GRCm38) missense probably damaging 1.00
IGL02503:Cfap57 APN 4 118,569,348 (GRCm38) critical splice donor site probably null
IGL02800:Cfap57 APN 4 118,614,750 (GRCm38) missense probably damaging 1.00
IGL03083:Cfap57 APN 4 118,584,739 (GRCm38) missense probably damaging 0.96
IGL03146:Cfap57 APN 4 118,599,019 (GRCm38) missense probably damaging 1.00
IGL03246:Cfap57 APN 4 118,576,645 (GRCm38) missense probably benign 0.29
IGL03376:Cfap57 APN 4 118,584,720 (GRCm38) missense probably damaging 0.96
G1Funyon:Cfap57 UTSW 4 118,593,074 (GRCm38) missense possibly damaging 0.94
R0144:Cfap57 UTSW 4 118,584,705 (GRCm38) missense probably damaging 1.00
R0184:Cfap57 UTSW 4 118,599,012 (GRCm38) missense probably damaging 1.00
R0415:Cfap57 UTSW 4 118,569,431 (GRCm38) missense possibly damaging 0.89
R0515:Cfap57 UTSW 4 118,620,402 (GRCm38) missense probably damaging 1.00
R0690:Cfap57 UTSW 4 118,569,727 (GRCm38) splice site probably benign
R0730:Cfap57 UTSW 4 118,612,920 (GRCm38) splice site probably null
R0737:Cfap57 UTSW 4 118,581,102 (GRCm38) missense possibly damaging 0.81
R0854:Cfap57 UTSW 4 118,561,872 (GRCm38) missense probably benign 0.04
R0880:Cfap57 UTSW 4 118,581,838 (GRCm38) nonsense probably null
R1085:Cfap57 UTSW 4 118,595,779 (GRCm38) missense probably benign 0.20
R1119:Cfap57 UTSW 4 118,606,676 (GRCm38) nonsense probably null
R1217:Cfap57 UTSW 4 118,606,652 (GRCm38) missense possibly damaging 0.67
R1294:Cfap57 UTSW 4 118,606,534 (GRCm38) critical splice donor site probably null
R1487:Cfap57 UTSW 4 118,614,781 (GRCm38) missense probably benign 0.01
R1676:Cfap57 UTSW 4 118,595,940 (GRCm38) missense probably damaging 1.00
R1688:Cfap57 UTSW 4 118,569,646 (GRCm38) missense probably null 0.20
R1709:Cfap57 UTSW 4 118,571,704 (GRCm38) missense probably benign 0.00
R1719:Cfap57 UTSW 4 118,606,631 (GRCm38) missense probably benign 0.04
R1791:Cfap57 UTSW 4 118,571,724 (GRCm38) missense possibly damaging 0.66
R1850:Cfap57 UTSW 4 118,599,894 (GRCm38) missense probably damaging 1.00
R1866:Cfap57 UTSW 4 118,599,927 (GRCm38) missense possibly damaging 0.49
R1912:Cfap57 UTSW 4 118,615,010 (GRCm38) missense probably damaging 0.96
R1978:Cfap57 UTSW 4 118,593,132 (GRCm38) missense probably benign 0.03
R2177:Cfap57 UTSW 4 118,606,688 (GRCm38) missense probably benign 0.00
R2322:Cfap57 UTSW 4 118,610,725 (GRCm38) missense probably benign
R3905:Cfap57 UTSW 4 118,595,839 (GRCm38) missense probably damaging 1.00
R4013:Cfap57 UTSW 4 118,593,143 (GRCm38) missense probably benign 0.01
R4079:Cfap57 UTSW 4 118,598,997 (GRCm38) missense probably benign 0.34
R4962:Cfap57 UTSW 4 118,613,065 (GRCm38) missense probably benign 0.21
R4970:Cfap57 UTSW 4 118,620,371 (GRCm38) missense probably damaging 0.99
R4974:Cfap57 UTSW 4 118,593,054 (GRCm38) missense probably damaging 1.00
R4999:Cfap57 UTSW 4 118,595,848 (GRCm38) missense probably benign 0.01
R5482:Cfap57 UTSW 4 118,569,641 (GRCm38) missense probably benign
R5522:Cfap57 UTSW 4 118,595,888 (GRCm38) missense probably benign 0.41
R5626:Cfap57 UTSW 4 118,614,783 (GRCm38) missense probably damaging 1.00
R5685:Cfap57 UTSW 4 118,569,459 (GRCm38) missense probably benign
R5712:Cfap57 UTSW 4 118,614,795 (GRCm38) missense probably damaging 1.00
R5961:Cfap57 UTSW 4 118,571,745 (GRCm38) missense probably benign 0.00
R6244:Cfap57 UTSW 4 118,579,410 (GRCm38) missense probably damaging 0.99
R6268:Cfap57 UTSW 4 118,569,451 (GRCm38) nonsense probably null
R6271:Cfap57 UTSW 4 118,595,759 (GRCm38) missense probably benign 0.13
R6330:Cfap57 UTSW 4 118,569,396 (GRCm38) missense probably benign
R6439:Cfap57 UTSW 4 118,588,975 (GRCm38) critical splice donor site probably null
R6639:Cfap57 UTSW 4 118,554,712 (GRCm38) missense probably benign 0.13
R6722:Cfap57 UTSW 4 118,584,717 (GRCm38) missense probably damaging 1.00
R7033:Cfap57 UTSW 4 118,613,126 (GRCm38) missense possibly damaging 0.67
R7143:Cfap57 UTSW 4 118,620,709 (GRCm38) unclassified probably benign
R7162:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7174:Cfap57 UTSW 4 118,589,067 (GRCm38) missense probably benign 0.35
R7210:Cfap57 UTSW 4 118,576,703 (GRCm38) nonsense probably null
R7242:Cfap57 UTSW 4 118,593,096 (GRCm38) missense possibly damaging 0.50
R7244:Cfap57 UTSW 4 118,554,800 (GRCm38) nonsense probably null
R7359:Cfap57 UTSW 4 118,598,965 (GRCm38) missense probably benign 0.01
R7373:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7394:Cfap57 UTSW 4 118,593,137 (GRCm38) missense probably benign 0.00
R7401:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7412:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7414:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7452:Cfap57 UTSW 4 118,595,784 (GRCm38) missense probably damaging 1.00
R7457:Cfap57 UTSW 4 118,589,001 (GRCm38) missense probably damaging 0.97
R7559:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7642:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7741:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7744:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7745:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7842:Cfap57 UTSW 4 118,554,755 (GRCm38) nonsense probably null
R7936:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7940:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R7942:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R8074:Cfap57 UTSW 4 118,569,625 (GRCm38) missense possibly damaging 0.66
R8301:Cfap57 UTSW 4 118,593,074 (GRCm38) missense possibly damaging 0.94
R8411:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R8447:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R8491:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R8524:Cfap57 UTSW 4 118,614,931 (GRCm38) missense probably benign
R8670:Cfap57 UTSW 4 118,614,925 (GRCm38) missense possibly damaging 0.91
R8707:Cfap57 UTSW 4 118,593,006 (GRCm38) missense probably benign 0.04
R8790:Cfap57 UTSW 4 118,581,914 (GRCm38) missense possibly damaging 0.59
R8941:Cfap57 UTSW 4 118,569,602 (GRCm38) missense probably damaging 0.99
R9139:Cfap57 UTSW 4 118,554,851 (GRCm38) missense probably benign 0.02
R9212:Cfap57 UTSW 4 118,579,452 (GRCm38) missense possibly damaging 0.95
R9442:Cfap57 UTSW 4 118,606,534 (GRCm38) critical splice donor site probably null
R9525:Cfap57 UTSW 4 118,576,581 (GRCm38) missense probably damaging 1.00
X0022:Cfap57 UTSW 4 118,614,745 (GRCm38) missense probably benign
Z1088:Cfap57 UTSW 4 118,581,882 (GRCm38) missense probably benign 0.22
Z1177:Cfap57 UTSW 4 118,598,956 (GRCm38) critical splice donor site probably null
Predicted Primers PCR Primer
(F):5'- TCTGCTTTTCCCACAGCCAATAGAC -3'
(R):5'- TCAAACTAAGGGGTTGCCAGGGAC -3'

Sequencing Primer
(F):5'- CAGCCAATAGACGAGGTTTGAG -3'
(R):5'- CCAGGGACGGATCTTTGTG -3'
Posted On 2014-05-23