Mutagenetix > Incidental Mutation

Incidental Mutation 'R1770:Zfp142'

196460

Institutional Source

Beutler Lab

Gene Symbol

Zfp142

Ensembl Gene

ENSMUSG00000026135

Gene Name

zinc finger protein 142

Synonyms

9330177B18Rik

MMRRC Submission

039801-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R1770 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

74605490-74627308 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 74618790 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Isoleucine at position 193 (F193I)

Ref Sequence

ENSEMBL: ENSMUSP00000027315 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000027315] [ENSMUST00000066986] [ENSMUST00000113737] [ENSMUST00000127921] [ENSMUST00000156613]

AlphaFold

G5E869

Predicted Effect

probably damaging
Transcript: ENSMUST00000027315
AA Change: F193I

PolyPhen 2 Score 0.986 (Sensitivity: 0.74; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000027315
Gene: ENSMUSG00000026135
AA Change: F193I

Domain	Start	End	E-Value	Type
ZnF_C2H2	103	127	1.16e1	SMART
ZnF_C2H2	164	186	1.26e-2	SMART
ZnF_C2H2	193	218	7.78e-3	SMART
ZnF_C2H2	223	247	2.29e0	SMART
ZnF_C2H2	250	272	9.96e-1	SMART
low complexity region	317	329	N/A	INTRINSIC
ZnF_C2H2	363	385	9.96e-1	SMART
ZnF_C2H2	391	411	1.26e1	SMART
ZnF_C2H2	419	442	1.47e-3	SMART
ZnF_C2H2	453	475	2.75e-3	SMART
ZnF_C2H2	486	511	3.34e-2	SMART
ZnF_C2H2	516	540	4.81e0	SMART
ZnF_C2H2	543	566	7.05e-1	SMART
ZnF_C2H2	572	595	2.17e-1	SMART
ZnF_C2H2	601	623	1.56e-2	SMART
ZnF_C2H2	629	651	8.94e-3	SMART
ZnF_C2H2	657	679	1.38e-3	SMART
ZnF_C2H2	685	707	9.44e-2	SMART
ZnF_C2H2	712	735	1.26e-2	SMART
ZnF_C2H2	744	767	1.31e0	SMART
ZnF_C2H2	773	796	2.63e0	SMART
low complexity region	903	919	N/A	INTRINSIC
low complexity region	953	969	N/A	INTRINSIC
low complexity region	996	1007	N/A	INTRINSIC
ZnF_C2H2	1039	1059	2.01e1	SMART
ZnF_C2H2	1069	1089	1.91e1	SMART
low complexity region	1147	1160	N/A	INTRINSIC
ZnF_C2H2	1187	1207	2.7e2	SMART
low complexity region	1209	1222	N/A	INTRINSIC
ZnF_C2H2	1265	1285	3.56e1	SMART
ZnF_C2H2	1295	1318	4.98e-1	SMART
ZnF_C2H2	1331	1354	2.49e-1	SMART
ZnF_C2H2	1360	1382	1.03e-2	SMART
ZnF_C2H2	1388	1411	5.72e-1	SMART
ZnF_C2H2	1417	1440	6.75e0	SMART
ZnF_C2H2	1446	1469	9.58e-3	SMART
ZnF_C2H2	1488	1511	1.64e-1	SMART
ZnF_C2H2	1514	1536	1.1e-2	SMART
ZnF_C2H2	1540	1563	4.05e-1	SMART
ZnF_C2H2	1580	1602	4.45e0	SMART
ZnF_C2H2	1608	1630	8.81e-2	SMART
ZnF_C2H2	1636	1658	1.18e-2	SMART
ZnF_C2H2	1664	1686	1.2e-3	SMART
ZnF_C2H2	1692	1715	3.89e-3	SMART
ZnF_C2H2	1721	1743	4.54e-4	SMART
ZnF_C2H2	1749	1771	1.18e-2	SMART
ZnF_C2H2	1777	1799	3.52e-1	SMART
low complexity region	1829	1838	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000066986

SMART Domains

Protein: ENSMUSP00000065149
Gene: ENSMUSG00000026135

Domain	Start	End	E-Value	Type
low complexity region	116	128	N/A	INTRINSIC
ZnF_C2H2	162	184	9.96e-1	SMART
ZnF_C2H2	190	210	1.26e1	SMART
ZnF_C2H2	218	241	1.47e-3	SMART
ZnF_C2H2	252	274	2.75e-3	SMART
ZnF_C2H2	285	310	3.34e-2	SMART
ZnF_C2H2	315	339	4.81e0	SMART
ZnF_C2H2	342	365	7.05e-1	SMART
ZnF_C2H2	371	394	2.17e-1	SMART
ZnF_C2H2	400	422	1.56e-2	SMART
ZnF_C2H2	428	450	8.94e-3	SMART
ZnF_C2H2	456	478	1.38e-3	SMART
ZnF_C2H2	484	506	9.44e-2	SMART
ZnF_C2H2	511	534	1.26e-2	SMART
ZnF_C2H2	543	566	1.31e0	SMART
ZnF_C2H2	572	595	2.63e0	SMART
low complexity region	702	718	N/A	INTRINSIC
low complexity region	752	768	N/A	INTRINSIC
low complexity region	795	806	N/A	INTRINSIC
ZnF_C2H2	838	858	2.01e1	SMART
ZnF_C2H2	868	888	1.91e1	SMART
low complexity region	946	959	N/A	INTRINSIC
ZnF_C2H2	986	1006	2.7e2	SMART
low complexity region	1008	1021	N/A	INTRINSIC
ZnF_C2H2	1064	1084	3.56e1	SMART
ZnF_C2H2	1094	1117	4.98e-1	SMART
ZnF_C2H2	1130	1153	2.49e-1	SMART
ZnF_C2H2	1159	1181	1.03e-2	SMART
ZnF_C2H2	1187	1210	5.72e-1	SMART
ZnF_C2H2	1216	1239	6.75e0	SMART
ZnF_C2H2	1245	1268	9.58e-3	SMART
ZnF_C2H2	1287	1310	1.64e-1	SMART
ZnF_C2H2	1313	1335	1.1e-2	SMART
ZnF_C2H2	1339	1362	4.05e-1	SMART
ZnF_C2H2	1379	1401	4.45e0	SMART
ZnF_C2H2	1407	1429	8.81e-2	SMART
ZnF_C2H2	1435	1457	1.18e-2	SMART
ZnF_C2H2	1463	1485	1.2e-3	SMART
ZnF_C2H2	1491	1514	3.89e-3	SMART
ZnF_C2H2	1520	1542	4.54e-4	SMART
ZnF_C2H2	1548	1570	1.18e-2	SMART
ZnF_C2H2	1576	1598	3.52e-1	SMART
low complexity region	1628	1637	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000113737

SMART Domains

Protein: ENSMUSP00000109366
Gene: ENSMUSG00000026135

Domain	Start	End	E-Value	Type
ZnF_C2H2	93	115	9.81e1	SMART
ZnF_C2H2	120	144	2.29e0	SMART
ZnF_C2H2	147	169	9.96e-1	SMART
low complexity region	214	226	N/A	INTRINSIC
ZnF_C2H2	260	282	9.96e-1	SMART
ZnF_C2H2	288	308	1.26e1	SMART
ZnF_C2H2	316	339	1.47e-3	SMART
ZnF_C2H2	350	372	2.75e-3	SMART
ZnF_C2H2	383	408	3.34e-2	SMART
ZnF_C2H2	413	437	4.81e0	SMART
ZnF_C2H2	440	463	7.05e-1	SMART
ZnF_C2H2	469	492	2.17e-1	SMART
ZnF_C2H2	498	520	1.56e-2	SMART
ZnF_C2H2	526	548	8.94e-3	SMART
ZnF_C2H2	554	576	1.38e-3	SMART
ZnF_C2H2	582	604	9.44e-2	SMART
ZnF_C2H2	609	632	1.26e-2	SMART
ZnF_C2H2	641	664	1.31e0	SMART
ZnF_C2H2	670	693	2.63e0	SMART
low complexity region	800	816	N/A	INTRINSIC
low complexity region	850	866	N/A	INTRINSIC
low complexity region	893	904	N/A	INTRINSIC
ZnF_C2H2	936	956	2.01e1	SMART
ZnF_C2H2	966	986	1.91e1	SMART
low complexity region	1044	1057	N/A	INTRINSIC
ZnF_C2H2	1084	1104	2.7e2	SMART
low complexity region	1106	1119	N/A	INTRINSIC
ZnF_C2H2	1162	1182	3.56e1	SMART
ZnF_C2H2	1192	1215	4.98e-1	SMART
ZnF_C2H2	1228	1251	2.49e-1	SMART
ZnF_C2H2	1257	1279	1.03e-2	SMART
ZnF_C2H2	1285	1308	5.72e-1	SMART
ZnF_C2H2	1314	1337	6.75e0	SMART
ZnF_C2H2	1343	1366	9.58e-3	SMART
ZnF_C2H2	1385	1408	1.64e-1	SMART
ZnF_C2H2	1411	1433	1.1e-2	SMART
ZnF_C2H2	1437	1460	4.05e-1	SMART
ZnF_C2H2	1477	1499	4.45e0	SMART
ZnF_C2H2	1505	1527	8.81e-2	SMART
ZnF_C2H2	1533	1555	1.18e-2	SMART
ZnF_C2H2	1561	1583	1.2e-3	SMART
ZnF_C2H2	1589	1612	3.89e-3	SMART
ZnF_C2H2	1618	1640	4.54e-4	SMART
ZnF_C2H2	1646	1668	1.18e-2	SMART
ZnF_C2H2	1674	1696	3.52e-1	SMART
low complexity region	1726	1735	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000127921

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000130112

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000136865

Predicted Effect

probably benign
Transcript: ENSMUST00000156613

Meta Mutation Damage Score

0.6467

Coding Region Coverage

1x: 97.4%
3x: 96.8%
10x: 95.1%
20x: 91.8%

Validation Efficiency

92% (69/75)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene belongs to the Kruppel family of C2H2-type zinc finger proteins. It contains 31 C2H2-type zinc fingers and may be involved in transcriptional regulation. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jan 2013]

Allele List at MGI

Other mutations in this stock

Total: 68 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcd4	T	C	12: 84,661,874 (GRCm39)	T84A	probably benign	Het
Adgra1	T	A	7: 139,453,947 (GRCm39)	Y161*	probably null	Het
Aldoart1	G	T	4: 72,770,173 (GRCm39)	H212N	probably benign	Het
Aldob	A	G	4: 49,536,861 (GRCm39)	Y343H	probably damaging	Het
Ankrd17	A	T	5: 90,391,235 (GRCm39)	V2036E	possibly damaging	Het
Ass1	A	G	2: 31,376,528 (GRCm39)	T131A	probably benign	Het
Baz1a	C	T	12: 54,945,293 (GRCm39)	R1354H	probably damaging	Het
C2cd2l	A	G	9: 44,228,108 (GRCm39)	V71A	probably benign	Het
C4b	T	A	17: 34,955,901 (GRCm39)	N678I	possibly damaging	Het
Carmil1	A	G	13: 24,357,657 (GRCm39)	L64P	probably damaging	Het
Cdh18	T	C	15: 23,474,487 (GRCm39)	S786P	probably benign	Het
Cep135	A	G	5: 76,751,042 (GRCm39)	E296G	possibly damaging	Het
Chml	G	A	1: 175,515,444 (GRCm39)	T159I	probably benign	Het
Cntn3	C	T	6: 102,246,166 (GRCm39)	E328K	possibly damaging	Het
Cstf1	A	G	2: 172,214,983 (GRCm39)	I35V	possibly damaging	Het
Cyp2c65	A	G	19: 39,070,642 (GRCm39)	K275R	probably benign	Het
Dab1	C	T	4: 104,588,948 (GRCm39)	A524V	probably benign	Het
Dbx2	T	C	15: 95,522,615 (GRCm39)	E364G	probably benign	Het
Dcaf13	A	T	15: 38,993,633 (GRCm39)	N242I	probably damaging	Het
Dcc	A	G	18: 71,579,470 (GRCm39)	V701A	probably benign	Het
Elapor2	A	T	5: 9,468,021 (GRCm39)	T230S	probably benign	Het
Fastkd5	A	T	2: 130,456,200 (GRCm39)	Y797N	probably damaging	Het
Fat4	T	A	3: 39,064,417 (GRCm39)	I4791K	probably damaging	Het
Gm3852	T	C	1: 46,051,048 (GRCm39)	I45V	possibly damaging	Het
Gng4	A	G	13: 13,999,851 (GRCm39)	D40G	probably damaging	Het
Gns	A	G	10: 121,213,952 (GRCm39)	D209G	probably benign	Het
Kif6	C	A	17: 50,210,677 (GRCm39)	Q791K	possibly damaging	Het
Klhl35	G	A	7: 99,123,082 (GRCm39)	V569M	possibly damaging	Het
Krt1c	A	G	15: 101,719,589 (GRCm39)	S694P	unknown	Het
Lrrc8c	A	G	5: 105,754,603 (GRCm39)	Y126C	probably damaging	Het
Mad2l1bp	A	G	17: 46,463,838 (GRCm39)	V62A	probably benign	Het
Map1b	T	C	13: 99,567,001 (GRCm39)	R1907G	unknown	Het
Mertk	A	G	2: 128,592,094 (GRCm39)	I273V	probably benign	Het
Mfsd4b1	A	G	10: 39,879,223 (GRCm39)	Y225H	probably damaging	Het
Mrc2	T	C	11: 105,229,619 (GRCm39)	V684A	probably damaging	Het
Msh6	G	A	17: 88,287,651 (GRCm39)	W97*	probably null	Het
Mtmr10	A	G	7: 63,986,469 (GRCm39)	I516V	possibly damaging	Het
Myo7a	A	T	7: 97,761,813 (GRCm39)		probably benign	Het
Ndufs5	T	C	4: 123,606,661 (GRCm39)	Y92C	probably benign	Het
Nlrp1b	C	T	11: 71,050,979 (GRCm39)	V1035I	probably benign	Het
Ntrk2	A	G	13: 59,009,132 (GRCm39)	R308G	possibly damaging	Het
Or12e13	A	G	2: 87,663,643 (GRCm39)	I87V	probably benign	Het
Pcdhb16	G	T	18: 37,612,233 (GRCm39)	G398W	probably damaging	Het
Plpbp	T	A	8: 27,543,326 (GRCm39)	S237T	probably damaging	Het
Pnpla6	T	A	8: 3,584,634 (GRCm39)	F769I	possibly damaging	Het
Polk	A	G	13: 96,631,950 (GRCm39)	V261A	probably damaging	Het
Prss52	C	T	14: 64,351,082 (GRCm39)	A289V	probably damaging	Het
Puf60	T	C	15: 75,942,723 (GRCm39)	K407E	probably benign	Het
Pzp	T	C	6: 128,462,580 (GRCm39)	D1455G	probably damaging	Het
Ranbp17	T	C	11: 33,167,301 (GRCm39)	N1054S	probably benign	Het
Sdk2	A	G	11: 113,684,567 (GRCm39)	S1965P	probably benign	Het
Spryd7	T	C	14: 61,777,654 (GRCm39)	Y142C	probably damaging	Het
Srrt	A	T	5: 137,298,122 (GRCm39)		probably benign	Het
Stk10	A	G	11: 32,572,464 (GRCm39)	E935G	possibly damaging	Het
Tas2r115	G	A	6: 132,714,934 (GRCm39)	R6C	probably damaging	Het
Tdrd7	T	A	4: 45,987,681 (GRCm39)		probably benign	Het
Trim29	A	T	9: 43,243,673 (GRCm39)	Q564L	probably damaging	Het
Trim5	T	C	7: 103,925,868 (GRCm39)	D231G	probably damaging	Het
Trpv2	A	G	11: 62,487,787 (GRCm39)	K676E	probably benign	Het
Ttn	T	C	2: 76,583,859 (GRCm39)	R22383G	probably damaging	Het
Ugt1a2	A	G	1: 88,129,160 (GRCm39)	I268V	probably benign	Het
Ugt8a	T	C	3: 125,667,852 (GRCm39)	N330D	probably benign	Het
Utrn	G	A	10: 12,351,040 (GRCm39)	H2822Y	probably damaging	Het
Vmn1r176	G	A	7: 23,534,946 (GRCm39)	A69V	probably benign	Het
Vmn2r106	T	C	17: 20,488,560 (GRCm39)	Y613C	probably damaging	Het
Wdfy1	A	T	1: 79,686,857 (GRCm39)	W296R	probably damaging	Het
Zfp11	G	A	5: 129,734,822 (GRCm39)	T213I	possibly damaging	Het
Zfp764	G	A	7: 127,004,739 (GRCm39)	Q131*	probably null	Het

Other mutations in Zfp142

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00581:Zfp142	APN	1	74,606,131 (GRCm39)	missense	probably damaging	1.00
IGL00711:Zfp142	APN	1	74,611,593 (GRCm39)	missense	probably damaging	1.00
IGL01391:Zfp142	APN	1	74,618,699 (GRCm39)	missense	probably damaging	1.00
IGL01808:Zfp142	APN	1	74,615,184 (GRCm39)	missense	probably damaging	1.00
IGL02074:Zfp142	APN	1	74,609,022 (GRCm39)	missense	probably damaging	0.97
IGL02134:Zfp142	APN	1	74,609,022 (GRCm39)	missense	probably damaging	0.97
IGL02567:Zfp142	APN	1	74,617,309 (GRCm39)	missense	possibly damaging	0.92
IGL02567:Zfp142	APN	1	74,617,306 (GRCm39)	missense	possibly damaging	0.84
IGL02567:Zfp142	APN	1	74,617,308 (GRCm39)	missense	possibly damaging	0.92
IGL02669:Zfp142	APN	1	74,610,432 (GRCm39)	missense	probably benign	0.18
IGL02694:Zfp142	APN	1	74,609,307 (GRCm39)	missense	probably damaging	0.98
IGL02884:Zfp142	APN	1	74,611,142 (GRCm39)	missense	probably damaging	0.99
IGL03000:Zfp142	APN	1	74,612,777 (GRCm39)	missense	probably benign	0.01
IGL03080:Zfp142	APN	1	74,610,368 (GRCm39)	missense	probably benign	0.18
IGL03238:Zfp142	APN	1	74,615,437 (GRCm39)	missense	probably benign	0.37
IGL03277:Zfp142	APN	1	74,610,193 (GRCm39)	missense	probably damaging	1.00
PIT4402001:Zfp142	UTSW	1	74,618,687 (GRCm39)	missense	probably damaging	1.00
R0124:Zfp142	UTSW	1	74,607,782 (GRCm39)	missense	probably damaging	1.00
R0256:Zfp142	UTSW	1	74,617,317 (GRCm39)	missense	probably benign
R0267:Zfp142	UTSW	1	74,615,223 (GRCm39)	missense	probably benign	0.05
R0306:Zfp142	UTSW	1	74,609,341 (GRCm39)	missense	probably damaging	1.00
R0321:Zfp142	UTSW	1	74,608,873 (GRCm39)	missense	probably damaging	1.00
R0466:Zfp142	UTSW	1	74,624,570 (GRCm39)	missense	possibly damaging	0.95
R0513:Zfp142	UTSW	1	74,610,714 (GRCm39)	missense	probably damaging	1.00
R1084:Zfp142	UTSW	1	74,610,985 (GRCm39)	missense	probably benign
R1534:Zfp142	UTSW	1	74,611,247 (GRCm39)	missense	probably benign	0.00
R1548:Zfp142	UTSW	1	74,609,263 (GRCm39)	missense	probably damaging	1.00
R1623:Zfp142	UTSW	1	74,610,934 (GRCm39)	missense	possibly damaging	0.56
R1628:Zfp142	UTSW	1	74,611,047 (GRCm39)	missense	possibly damaging	0.94
R1710:Zfp142	UTSW	1	74,611,389 (GRCm39)	missense	probably damaging	1.00
R1722:Zfp142	UTSW	1	74,608,935 (GRCm39)	missense	probably damaging	1.00
R2042:Zfp142	UTSW	1	74,609,778 (GRCm39)	missense	probably benign	0.10
R2112:Zfp142	UTSW	1	74,612,795 (GRCm39)	missense	probably damaging	1.00
R2249:Zfp142	UTSW	1	74,606,191 (GRCm39)	missense	probably damaging	1.00
R4393:Zfp142	UTSW	1	74,611,219 (GRCm39)	missense	probably benign	0.00
R4700:Zfp142	UTSW	1	74,609,431 (GRCm39)	missense	probably damaging	1.00
R4750:Zfp142	UTSW	1	74,611,617 (GRCm39)	missense	probably damaging	1.00
R4763:Zfp142	UTSW	1	74,615,671 (GRCm39)	missense	probably damaging	1.00
R5208:Zfp142	UTSW	1	74,610,027 (GRCm39)	missense	probably benign	0.18
R5233:Zfp142	UTSW	1	74,624,608 (GRCm39)	missense	probably damaging	1.00
R5585:Zfp142	UTSW	1	74,617,404 (GRCm39)	nonsense	probably null
R6192:Zfp142	UTSW	1	74,609,667 (GRCm39)	missense	probably damaging	1.00
R6461:Zfp142	UTSW	1	74,606,344 (GRCm39)	missense	probably damaging	1.00
R6482:Zfp142	UTSW	1	74,609,376 (GRCm39)	splice site	probably null
R7320:Zfp142	UTSW	1	74,609,167 (GRCm39)	nonsense	probably null
R7438:Zfp142	UTSW	1	74,624,679 (GRCm39)	missense	probably benign
R7528:Zfp142	UTSW	1	74,610,061 (GRCm39)	missense	probably benign	0.00
R7600:Zfp142	UTSW	1	74,612,827 (GRCm39)	missense	probably damaging	1.00
R8007:Zfp142	UTSW	1	74,610,655 (GRCm39)	missense	probably benign	0.01
R8681:Zfp142	UTSW	1	74,610,747 (GRCm39)	missense	probably damaging	1.00
R8772:Zfp142	UTSW	1	74,610,825 (GRCm39)	missense	possibly damaging	0.87
R9058:Zfp142	UTSW	1	74,608,955 (GRCm39)	nonsense	probably null
R9233:Zfp142	UTSW	1	74,610,288 (GRCm39)	missense	probably benign
R9281:Zfp142	UTSW	1	74,607,731 (GRCm39)	missense	probably damaging	1.00
R9302:Zfp142	UTSW	1	74,606,302 (GRCm39)	missense	probably damaging	0.98
R9454:Zfp142	UTSW	1	74,609,016 (GRCm39)	missense	probably damaging	1.00
R9569:Zfp142	UTSW	1	74,615,386 (GRCm39)	missense	probably damaging	1.00
R9595:Zfp142	UTSW	1	74,611,462 (GRCm39)	missense	probably damaging	1.00
R9680:Zfp142	UTSW	1	74,610,933 (GRCm39)	missense	probably benign	0.16
Z1177:Zfp142	UTSW	1	74,609,325 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TGAACAGCAGCAGAAAGTTCTCCC -3'
(R):5'- CACTGAGACCCATATTCAGGCTGTG -3'

Sequencing Primer
(F):5'- TTGGAGCCCATGAAGCTG -3'
(R):5'- TGTGCAGGACCTCTCTAGTC -3'

Posted On

2014-05-23