Incidental Mutation 'R1772:Cspg4'
ID |
196708 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Cspg4
|
Ensembl Gene |
ENSMUSG00000032911 |
Gene Name |
chondroitin sulfate proteoglycan 4 |
Synonyms |
Cspg4a, AN2, NG2, 4732461B14Rik |
MMRRC Submission |
039803-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R1772 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
9 |
Chromosomal Location |
56772388-56807154 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 56804776 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Serine to Arginine
at position 1862
(S1862R)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000038909
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000035661]
|
AlphaFold |
Q8VHY0 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000035661
AA Change: S1862R
PolyPhen 2
Score 0.017 (Sensitivity: 0.95; Specificity: 0.80)
|
SMART Domains |
Protein: ENSMUSP00000038909 Gene: ENSMUSG00000032911 AA Change: S1862R
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
29 |
N/A |
INTRINSIC |
LamG
|
47 |
179 |
9.16e-22 |
SMART |
LamG
|
223 |
364 |
3.52e-23 |
SMART |
low complexity region
|
384 |
397 |
N/A |
INTRINSIC |
Pfam:Cadherin_3
|
495 |
646 |
1e-36 |
PFAM |
Pfam:Cadherin_3
|
732 |
885 |
7.9e-14 |
PFAM |
Pfam:Cadherin_3
|
868 |
996 |
7e-15 |
PFAM |
Pfam:Cadherin_3
|
972 |
1115 |
9e-26 |
PFAM |
Pfam:Cadherin_3
|
1116 |
1223 |
1.1e-10 |
PFAM |
Pfam:Cadherin_3
|
1225 |
1344 |
3.3e-12 |
PFAM |
Pfam:Cadherin_3
|
1425 |
1568 |
6.3e-52 |
PFAM |
Pfam:Cadherin_3
|
1578 |
1684 |
9.7e-9 |
PFAM |
Pfam:Cadherin_3
|
1674 |
1809 |
3.2e-9 |
PFAM |
Pfam:Cadherin_3
|
1779 |
1929 |
1.6e-31 |
PFAM |
transmembrane domain
|
2229 |
2251 |
N/A |
INTRINSIC |
low complexity region
|
2295 |
2305 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000215666
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000217052
|
Meta Mutation Damage Score |
0.1189 |
Coding Region Coverage |
- 1x: 97.5%
- 3x: 97.0%
- 10x: 95.6%
- 20x: 93.5%
|
Validation Efficiency |
97% (107/110) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] A human melanoma-associated chondroitin sulfate proteoglycan plays a role in stabilizing cell-substratum interactions during early events of melanoma cell spreading on endothelial basement membranes. CSPG4 represents an integral membrane chondroitin sulfate proteoglycan expressed by human malignant melanoma cells. [provided by RefSeq, Jul 2008] PHENOTYPE: Mice homozygous for a null mutation display abnormal dentate gyrus morphology and abnormal smooth muscle cell physiology. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 106 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adgb |
G |
T |
10: 10,258,465 (GRCm39) |
|
probably benign |
Het |
Aldh1a7 |
T |
C |
19: 20,693,383 (GRCm39) |
K179E |
probably damaging |
Het |
Angptl7 |
G |
A |
4: 148,581,883 (GRCm39) |
R168C |
probably damaging |
Het |
Atp8b1 |
T |
A |
18: 64,706,563 (GRCm39) |
I208F |
possibly damaging |
Het |
Bco1 |
A |
G |
8: 117,857,347 (GRCm39) |
Y438C |
probably benign |
Het |
Bltp1 |
T |
C |
3: 37,013,581 (GRCm39) |
S1937P |
probably damaging |
Het |
Btrc |
A |
C |
19: 45,501,100 (GRCm39) |
K218Q |
probably damaging |
Het |
Cct8l1 |
G |
A |
5: 25,722,697 (GRCm39) |
V471M |
probably damaging |
Het |
Cd180 |
C |
T |
13: 102,842,750 (GRCm39) |
L599F |
probably benign |
Het |
Cd300e |
T |
C |
11: 114,945,344 (GRCm39) |
N150S |
probably benign |
Het |
Clcn1 |
C |
A |
6: 42,271,079 (GRCm39) |
T281K |
probably damaging |
Het |
Cnnm3 |
T |
C |
1: 36,558,038 (GRCm39) |
S417P |
probably damaging |
Het |
Cspg5 |
A |
T |
9: 110,091,206 (GRCm39) |
N432Y |
probably damaging |
Het |
Cyp2r1 |
T |
A |
7: 114,152,451 (GRCm39) |
I169F |
probably damaging |
Het |
D130043K22Rik |
T |
A |
13: 25,059,982 (GRCm39) |
S618T |
probably damaging |
Het |
Diaph3 |
G |
A |
14: 87,202,985 (GRCm39) |
P635L |
probably damaging |
Het |
Dlg1 |
A |
G |
16: 31,484,485 (GRCm39) |
I38V |
possibly damaging |
Het |
Dlk1 |
T |
G |
12: 109,425,685 (GRCm39) |
V186G |
probably damaging |
Het |
Dmxl2 |
T |
C |
9: 54,330,508 (GRCm39) |
|
probably benign |
Het |
Dnajc17 |
G |
A |
2: 119,014,164 (GRCm39) |
R132* |
probably null |
Het |
Dock9 |
G |
T |
14: 121,847,210 (GRCm39) |
N1042K |
probably benign |
Het |
Dok7 |
A |
T |
5: 35,243,994 (GRCm39) |
Q511L |
probably damaging |
Het |
Espnl |
G |
A |
1: 91,272,325 (GRCm39) |
E562K |
possibly damaging |
Het |
Evi5 |
G |
A |
5: 107,943,707 (GRCm39) |
T562I |
probably benign |
Het |
Exd2 |
T |
A |
12: 80,536,253 (GRCm39) |
D294E |
probably benign |
Het |
Fbn1 |
A |
T |
2: 125,245,148 (GRCm39) |
D246E |
possibly damaging |
Het |
Fbxw16 |
A |
T |
9: 109,268,650 (GRCm39) |
W247R |
possibly damaging |
Het |
Fcer1a |
A |
G |
1: 173,053,004 (GRCm39) |
I64T |
probably benign |
Het |
Fcgbp |
C |
A |
7: 27,804,600 (GRCm39) |
Q1903K |
possibly damaging |
Het |
Fmn1 |
A |
G |
2: 113,195,700 (GRCm39) |
S467G |
unknown |
Het |
Fndc7 |
T |
A |
3: 108,777,850 (GRCm39) |
T369S |
probably damaging |
Het |
Fnta |
T |
C |
8: 26,490,994 (GRCm39) |
|
probably benign |
Het |
Gak |
A |
T |
5: 108,754,758 (GRCm39) |
H289Q |
probably damaging |
Het |
Gas2l3 |
A |
G |
10: 89,252,876 (GRCm39) |
|
probably benign |
Het |
Gbp8 |
T |
C |
5: 105,163,987 (GRCm39) |
N437S |
probably benign |
Het |
Gk5 |
G |
A |
9: 96,032,850 (GRCm39) |
|
probably null |
Het |
Hid1 |
A |
T |
11: 115,239,299 (GRCm39) |
V788E |
probably damaging |
Het |
Hmcn1 |
T |
C |
1: 150,439,319 (GRCm39) |
T5505A |
probably damaging |
Het |
Igf1r |
T |
A |
7: 67,844,822 (GRCm39) |
M865K |
probably benign |
Het |
Katnal2 |
G |
A |
18: 77,090,233 (GRCm39) |
T258I |
probably damaging |
Het |
Kdm3b |
A |
T |
18: 34,936,557 (GRCm39) |
I280L |
probably benign |
Het |
Kif24 |
A |
G |
4: 41,409,787 (GRCm39) |
V382A |
probably damaging |
Het |
Kif2a |
A |
T |
13: 107,114,640 (GRCm39) |
|
probably benign |
Het |
Klhl10 |
A |
G |
11: 100,333,022 (GRCm39) |
I56V |
probably benign |
Het |
Klk6 |
C |
T |
7: 43,478,695 (GRCm39) |
Q201* |
probably null |
Het |
Klra3 |
A |
T |
6: 130,300,671 (GRCm39) |
S233T |
probably benign |
Het |
Krt9 |
A |
T |
11: 100,082,131 (GRCm39) |
M223K |
probably damaging |
Het |
Lama4 |
G |
A |
10: 38,936,220 (GRCm39) |
E632K |
probably benign |
Het |
Lamb1 |
T |
C |
12: 31,328,524 (GRCm39) |
Y163H |
probably damaging |
Het |
Lipo3 |
A |
G |
19: 33,764,821 (GRCm39) |
I11T |
probably benign |
Het |
Lix1l |
T |
A |
3: 96,531,207 (GRCm39) |
H333Q |
possibly damaging |
Het |
Mal2 |
T |
A |
15: 54,451,783 (GRCm39) |
M68K |
probably damaging |
Het |
Map2k2 |
T |
C |
10: 80,956,934 (GRCm39) |
I104T |
probably damaging |
Het |
Matn2 |
T |
C |
15: 34,428,931 (GRCm39) |
V765A |
probably damaging |
Het |
Mptx2 |
T |
A |
1: 173,102,040 (GRCm39) |
K216N |
probably damaging |
Het |
Mup5 |
C |
T |
4: 61,750,578 (GRCm39) |
|
probably null |
Het |
Mycbp2 |
A |
G |
14: 103,419,855 (GRCm39) |
Y2494H |
probably damaging |
Het |
Myh3 |
G |
A |
11: 66,990,220 (GRCm39) |
D1622N |
probably benign |
Het |
Myo6 |
T |
C |
9: 80,177,331 (GRCm39) |
I609T |
possibly damaging |
Het |
Ndst1 |
G |
A |
18: 60,835,909 (GRCm39) |
T458I |
probably damaging |
Het |
Neb |
A |
T |
2: 52,125,689 (GRCm39) |
Y3622N |
probably damaging |
Het |
Ntm |
A |
G |
9: 29,090,396 (GRCm39) |
Y108H |
probably benign |
Het |
Or13c3 |
T |
G |
4: 52,855,730 (GRCm39) |
K261T |
probably benign |
Het |
Or1a1b |
T |
C |
11: 74,097,398 (GRCm39) |
I215V |
probably benign |
Het |
Or52e19 |
T |
C |
7: 102,959,449 (GRCm39) |
Y174H |
possibly damaging |
Het |
Pappa2 |
T |
A |
1: 158,641,938 (GRCm39) |
I1373F |
possibly damaging |
Het |
Pear1 |
A |
G |
3: 87,661,799 (GRCm39) |
|
probably benign |
Het |
Phc3 |
C |
T |
3: 31,015,969 (GRCm39) |
A81T |
probably damaging |
Het |
Pmepa1 |
A |
G |
2: 173,076,153 (GRCm39) |
S105P |
probably damaging |
Het |
Ppp6r1 |
T |
C |
7: 4,645,030 (GRCm39) |
I248V |
probably benign |
Het |
Prdm4 |
G |
A |
10: 85,729,256 (GRCm39) |
T717I |
probably damaging |
Het |
Prom1 |
T |
C |
5: 44,168,566 (GRCm39) |
T669A |
probably benign |
Het |
Ptpn5 |
T |
A |
7: 46,740,516 (GRCm39) |
I96F |
probably benign |
Het |
Ptpro |
T |
C |
6: 137,407,741 (GRCm39) |
L922P |
probably damaging |
Het |
Reck |
A |
T |
4: 43,890,982 (GRCm39) |
H40L |
probably benign |
Het |
Rreb1 |
T |
A |
13: 38,114,899 (GRCm39) |
C753S |
probably benign |
Het |
Sacs |
T |
C |
14: 61,448,346 (GRCm39) |
L3464P |
probably damaging |
Het |
Samsn1 |
A |
T |
16: 75,667,663 (GRCm39) |
D304E |
probably benign |
Het |
Scgb2b3 |
T |
C |
7: 31,059,621 (GRCm39) |
N51S |
possibly damaging |
Het |
Shroom3 |
T |
C |
5: 93,088,515 (GRCm39) |
S341P |
probably damaging |
Het |
Siglece |
T |
C |
7: 43,308,717 (GRCm39) |
D212G |
probably damaging |
Het |
Sirpa |
A |
G |
2: 129,458,376 (GRCm39) |
T331A |
probably damaging |
Het |
Spata21 |
T |
C |
4: 140,838,607 (GRCm39) |
S553P |
possibly damaging |
Het |
Speer4b |
T |
A |
5: 27,705,236 (GRCm39) |
|
probably benign |
Het |
Srgap2 |
T |
C |
1: 131,247,376 (GRCm39) |
D552G |
probably damaging |
Het |
Stab2 |
A |
G |
10: 86,790,098 (GRCm39) |
I556T |
probably benign |
Het |
Strip1 |
C |
T |
3: 107,534,047 (GRCm39) |
|
probably null |
Het |
Stxbp6 |
T |
A |
12: 44,949,653 (GRCm39) |
D92V |
probably damaging |
Het |
Styx |
A |
G |
14: 45,594,215 (GRCm39) |
K46E |
probably damaging |
Het |
Supt20 |
T |
A |
3: 54,617,841 (GRCm39) |
V314E |
probably damaging |
Het |
Syne2 |
T |
A |
12: 75,985,503 (GRCm39) |
D1650E |
probably benign |
Het |
Szt2 |
T |
A |
4: 118,262,714 (GRCm39) |
K21M |
probably damaging |
Het |
Tbx4 |
A |
T |
11: 85,802,033 (GRCm39) |
H222L |
probably damaging |
Het |
Tcstv1b |
T |
A |
13: 120,634,725 (GRCm39) |
D2E |
probably benign |
Het |
Tmx3 |
A |
T |
18: 90,551,121 (GRCm39) |
I254L |
probably benign |
Het |
Tns2 |
C |
T |
15: 102,017,369 (GRCm39) |
R281C |
probably damaging |
Het |
Trpv2 |
A |
T |
11: 62,485,052 (GRCm39) |
|
probably benign |
Het |
Ubap2 |
A |
G |
4: 41,202,380 (GRCm39) |
S683P |
probably benign |
Het |
Ube2d3 |
C |
T |
3: 135,170,972 (GRCm39) |
R139W |
probably benign |
Het |
Ubox5 |
G |
T |
2: 130,433,794 (GRCm39) |
Q518K |
probably benign |
Het |
Usp42 |
T |
C |
5: 143,702,857 (GRCm39) |
N588S |
probably damaging |
Het |
Vars2 |
G |
A |
17: 35,970,976 (GRCm39) |
T618M |
probably damaging |
Het |
Wfdc17 |
A |
T |
11: 83,595,730 (GRCm39) |
N65Y |
probably damaging |
Het |
Zbtb38 |
G |
A |
9: 96,570,094 (GRCm39) |
P330L |
probably damaging |
Het |
Zfp385a |
C |
T |
15: 103,224,308 (GRCm39) |
|
probably null |
Het |
Zfp637 |
T |
A |
6: 117,822,373 (GRCm39) |
L167H |
probably damaging |
Het |
|
Other mutations in Cspg4 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01074:Cspg4
|
APN |
9 |
56,806,149 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01322:Cspg4
|
APN |
9 |
56,805,872 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01922:Cspg4
|
APN |
9 |
56,795,171 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01993:Cspg4
|
APN |
9 |
56,805,762 (GRCm39) |
missense |
probably benign |
0.09 |
IGL02379:Cspg4
|
APN |
9 |
56,799,893 (GRCm39) |
splice site |
probably benign |
|
IGL02398:Cspg4
|
APN |
9 |
56,793,970 (GRCm39) |
missense |
probably benign |
0.43 |
IGL02503:Cspg4
|
APN |
9 |
56,804,687 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02504:Cspg4
|
APN |
9 |
56,793,056 (GRCm39) |
missense |
probably benign |
0.06 |
IGL02692:Cspg4
|
APN |
9 |
56,794,738 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02728:Cspg4
|
APN |
9 |
56,793,765 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02806:Cspg4
|
APN |
9 |
56,797,543 (GRCm39) |
missense |
possibly damaging |
0.57 |
IGL02886:Cspg4
|
APN |
9 |
56,804,672 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03005:Cspg4
|
APN |
9 |
56,795,772 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03008:Cspg4
|
APN |
9 |
56,805,759 (GRCm39) |
missense |
possibly damaging |
0.48 |
IGL03202:Cspg4
|
APN |
9 |
56,805,023 (GRCm39) |
missense |
possibly damaging |
0.93 |
chiclets
|
UTSW |
9 |
56,792,506 (GRCm39) |
splice site |
probably null |
|
R0066:Cspg4
|
UTSW |
9 |
56,795,418 (GRCm39) |
missense |
probably damaging |
1.00 |
R0066:Cspg4
|
UTSW |
9 |
56,795,418 (GRCm39) |
missense |
probably damaging |
1.00 |
R0254:Cspg4
|
UTSW |
9 |
56,804,694 (GRCm39) |
missense |
probably damaging |
0.98 |
R0284:Cspg4
|
UTSW |
9 |
56,793,423 (GRCm39) |
missense |
probably damaging |
0.96 |
R0513:Cspg4
|
UTSW |
9 |
56,805,375 (GRCm39) |
missense |
probably benign |
0.03 |
R0602:Cspg4
|
UTSW |
9 |
56,795,301 (GRCm39) |
missense |
probably damaging |
1.00 |
R0747:Cspg4
|
UTSW |
9 |
56,797,564 (GRCm39) |
missense |
probably damaging |
1.00 |
R1005:Cspg4
|
UTSW |
9 |
56,796,020 (GRCm39) |
missense |
probably benign |
0.13 |
R1421:Cspg4
|
UTSW |
9 |
56,803,910 (GRCm39) |
missense |
probably benign |
0.00 |
R1443:Cspg4
|
UTSW |
9 |
56,793,796 (GRCm39) |
missense |
probably damaging |
1.00 |
R1481:Cspg4
|
UTSW |
9 |
56,795,094 (GRCm39) |
missense |
probably damaging |
0.98 |
R1585:Cspg4
|
UTSW |
9 |
56,806,151 (GRCm39) |
missense |
probably damaging |
0.99 |
R1624:Cspg4
|
UTSW |
9 |
56,795,754 (GRCm39) |
missense |
probably damaging |
1.00 |
R1670:Cspg4
|
UTSW |
9 |
56,804,687 (GRCm39) |
missense |
probably damaging |
1.00 |
R1721:Cspg4
|
UTSW |
9 |
56,796,027 (GRCm39) |
missense |
probably damaging |
0.98 |
R1728:Cspg4
|
UTSW |
9 |
56,805,821 (GRCm39) |
missense |
probably benign |
0.00 |
R1729:Cspg4
|
UTSW |
9 |
56,805,821 (GRCm39) |
missense |
probably benign |
0.00 |
R1763:Cspg4
|
UTSW |
9 |
56,794,263 (GRCm39) |
missense |
probably damaging |
0.97 |
R1938:Cspg4
|
UTSW |
9 |
56,794,385 (GRCm39) |
missense |
probably benign |
0.00 |
R1975:Cspg4
|
UTSW |
9 |
56,797,762 (GRCm39) |
missense |
probably damaging |
1.00 |
R2064:Cspg4
|
UTSW |
9 |
56,803,940 (GRCm39) |
missense |
probably damaging |
1.00 |
R2185:Cspg4
|
UTSW |
9 |
56,794,256 (GRCm39) |
missense |
probably benign |
0.37 |
R2252:Cspg4
|
UTSW |
9 |
56,805,330 (GRCm39) |
missense |
probably damaging |
1.00 |
R2291:Cspg4
|
UTSW |
9 |
56,800,027 (GRCm39) |
missense |
probably damaging |
0.96 |
R2329:Cspg4
|
UTSW |
9 |
56,795,834 (GRCm39) |
missense |
probably benign |
0.00 |
R3780:Cspg4
|
UTSW |
9 |
56,795,517 (GRCm39) |
missense |
probably damaging |
1.00 |
R3830:Cspg4
|
UTSW |
9 |
56,804,905 (GRCm39) |
missense |
probably damaging |
0.99 |
R3944:Cspg4
|
UTSW |
9 |
56,793,407 (GRCm39) |
missense |
probably damaging |
1.00 |
R4011:Cspg4
|
UTSW |
9 |
56,794,601 (GRCm39) |
missense |
probably benign |
0.19 |
R4115:Cspg4
|
UTSW |
9 |
56,805,678 (GRCm39) |
missense |
probably damaging |
1.00 |
R4173:Cspg4
|
UTSW |
9 |
56,795,214 (GRCm39) |
missense |
probably damaging |
1.00 |
R4243:Cspg4
|
UTSW |
9 |
56,795,141 (GRCm39) |
missense |
probably benign |
0.12 |
R4329:Cspg4
|
UTSW |
9 |
56,799,749 (GRCm39) |
missense |
probably damaging |
0.99 |
R4544:Cspg4
|
UTSW |
9 |
56,795,913 (GRCm39) |
missense |
possibly damaging |
0.79 |
R4545:Cspg4
|
UTSW |
9 |
56,795,913 (GRCm39) |
missense |
possibly damaging |
0.79 |
R4546:Cspg4
|
UTSW |
9 |
56,795,913 (GRCm39) |
missense |
possibly damaging |
0.79 |
R4649:Cspg4
|
UTSW |
9 |
56,794,149 (GRCm39) |
missense |
possibly damaging |
0.93 |
R4663:Cspg4
|
UTSW |
9 |
56,793,960 (GRCm39) |
missense |
possibly damaging |
0.61 |
R4674:Cspg4
|
UTSW |
9 |
56,805,489 (GRCm39) |
missense |
probably damaging |
1.00 |
R4779:Cspg4
|
UTSW |
9 |
56,793,092 (GRCm39) |
missense |
probably damaging |
1.00 |
R4884:Cspg4
|
UTSW |
9 |
56,805,353 (GRCm39) |
missense |
probably benign |
0.00 |
R5021:Cspg4
|
UTSW |
9 |
56,805,014 (GRCm39) |
missense |
probably benign |
0.01 |
R5051:Cspg4
|
UTSW |
9 |
56,793,020 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5328:Cspg4
|
UTSW |
9 |
56,793,140 (GRCm39) |
missense |
probably benign |
0.01 |
R5394:Cspg4
|
UTSW |
9 |
56,797,484 (GRCm39) |
missense |
probably damaging |
1.00 |
R5567:Cspg4
|
UTSW |
9 |
56,793,932 (GRCm39) |
missense |
probably benign |
0.00 |
R5682:Cspg4
|
UTSW |
9 |
56,793,480 (GRCm39) |
missense |
probably benign |
0.14 |
R5690:Cspg4
|
UTSW |
9 |
56,806,019 (GRCm39) |
missense |
probably benign |
0.01 |
R5715:Cspg4
|
UTSW |
9 |
56,798,335 (GRCm39) |
missense |
possibly damaging |
0.90 |
R5717:Cspg4
|
UTSW |
9 |
56,793,082 (GRCm39) |
missense |
probably benign |
|
R5726:Cspg4
|
UTSW |
9 |
56,793,188 (GRCm39) |
missense |
probably damaging |
1.00 |
R5898:Cspg4
|
UTSW |
9 |
56,792,506 (GRCm39) |
splice site |
probably null |
|
R6140:Cspg4
|
UTSW |
9 |
56,804,508 (GRCm39) |
missense |
probably benign |
0.35 |
R6147:Cspg4
|
UTSW |
9 |
56,796,056 (GRCm39) |
missense |
probably damaging |
0.99 |
R6239:Cspg4
|
UTSW |
9 |
56,795,466 (GRCm39) |
missense |
probably benign |
0.04 |
R6343:Cspg4
|
UTSW |
9 |
56,799,976 (GRCm39) |
missense |
probably benign |
|
R6351:Cspg4
|
UTSW |
9 |
56,799,928 (GRCm39) |
missense |
probably benign |
0.00 |
R6564:Cspg4
|
UTSW |
9 |
56,797,442 (GRCm39) |
missense |
probably benign |
0.02 |
R6814:Cspg4
|
UTSW |
9 |
56,797,624 (GRCm39) |
missense |
possibly damaging |
0.91 |
R6928:Cspg4
|
UTSW |
9 |
56,805,164 (GRCm39) |
missense |
possibly damaging |
0.95 |
R6967:Cspg4
|
UTSW |
9 |
56,797,420 (GRCm39) |
missense |
possibly damaging |
0.52 |
R6981:Cspg4
|
UTSW |
9 |
56,794,385 (GRCm39) |
missense |
probably benign |
0.00 |
R7033:Cspg4
|
UTSW |
9 |
56,795,358 (GRCm39) |
missense |
probably damaging |
0.96 |
R7419:Cspg4
|
UTSW |
9 |
56,795,727 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7809:Cspg4
|
UTSW |
9 |
56,797,474 (GRCm39) |
missense |
probably damaging |
1.00 |
R7940:Cspg4
|
UTSW |
9 |
56,795,381 (GRCm39) |
nonsense |
probably null |
|
R8078:Cspg4
|
UTSW |
9 |
56,797,543 (GRCm39) |
missense |
possibly damaging |
0.57 |
R8082:Cspg4
|
UTSW |
9 |
56,793,177 (GRCm39) |
missense |
probably damaging |
1.00 |
R8217:Cspg4
|
UTSW |
9 |
56,797,637 (GRCm39) |
missense |
possibly damaging |
0.53 |
R8237:Cspg4
|
UTSW |
9 |
56,799,964 (GRCm39) |
missense |
probably damaging |
1.00 |
R8353:Cspg4
|
UTSW |
9 |
56,805,953 (GRCm39) |
missense |
probably damaging |
1.00 |
R8372:Cspg4
|
UTSW |
9 |
56,794,479 (GRCm39) |
missense |
probably damaging |
1.00 |
R8691:Cspg4
|
UTSW |
9 |
56,800,280 (GRCm39) |
missense |
probably benign |
|
R8720:Cspg4
|
UTSW |
9 |
56,794,797 (GRCm39) |
missense |
probably benign |
0.25 |
R8907:Cspg4
|
UTSW |
9 |
56,790,967 (GRCm39) |
missense |
probably damaging |
1.00 |
R9063:Cspg4
|
UTSW |
9 |
56,795,687 (GRCm39) |
missense |
probably benign |
0.03 |
R9115:Cspg4
|
UTSW |
9 |
56,797,736 (GRCm39) |
missense |
probably damaging |
1.00 |
R9152:Cspg4
|
UTSW |
9 |
56,795,463 (GRCm39) |
missense |
probably benign |
0.26 |
R9154:Cspg4
|
UTSW |
9 |
56,798,287 (GRCm39) |
missense |
|
|
R9361:Cspg4
|
UTSW |
9 |
56,803,877 (GRCm39) |
missense |
probably damaging |
1.00 |
R9574:Cspg4
|
UTSW |
9 |
56,797,342 (GRCm39) |
missense |
probably damaging |
1.00 |
R9608:Cspg4
|
UTSW |
9 |
56,792,836 (GRCm39) |
missense |
probably benign |
|
R9685:Cspg4
|
UTSW |
9 |
56,797,622 (GRCm39) |
missense |
probably benign |
0.05 |
X0065:Cspg4
|
UTSW |
9 |
56,793,020 (GRCm39) |
missense |
possibly damaging |
0.95 |
Z1088:Cspg4
|
UTSW |
9 |
56,793,320 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- GGCATGATGTACTCTTCCAGGTCAC -3'
(R):5'- TGGCTCCATCAGACATGCTCAAC -3'
Sequencing Primer
(F):5'- ACTTCCTGCAATCTGAGCTGG -3'
(R):5'- TGCTCAACTGGAAGACGC -3'
|
Posted On |
2014-05-23 |