Incidental Mutation 'R1776:Asph'
ID 197004
Institutional Source Beutler Lab
Gene Symbol Asph
Ensembl Gene ENSMUSG00000028207
Gene Name aspartate-beta-hydroxylase
Synonyms calsequestrin-binding protein, 2310005F16Rik, aspartyl beta-hydroxylase, jumbug, BAH, Junctin, junctate, 3110001L23Rik, cI-37
MMRRC Submission 039807-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R1776 (G1)
Quality Score 202
Status Validated
Chromosome 4
Chromosomal Location 9449085-9669344 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 9598773 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Serine to Arginine at position 149 (S149R)
Ref Sequence ENSEMBL: ENSMUSP00000103972 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000078139] [ENSMUST00000084915] [ENSMUST00000108333] [ENSMUST00000108334] [ENSMUST00000108335] [ENSMUST00000108337] [ENSMUST00000108339] [ENSMUST00000108340]
AlphaFold Q8BSY0
Predicted Effect possibly damaging
Transcript: ENSMUST00000078139
AA Change: S244R

PolyPhen 2 Score 0.655 (Sensitivity: 0.87; Specificity: 0.91)
SMART Domains Protein: ENSMUSP00000077273
Gene: ENSMUSG00000028207
AA Change: S244R

DomainStartEndE-ValueType
low complexity region 9 40 N/A INTRINSIC
Pfam:Asp-B-Hydro_N 52 307 7e-104 PFAM
Pfam:TPR_6 326 357 4.4e-5 PFAM
Pfam:TPR_16 328 398 1.3e-9 PFAM
Pfam:TPR_2 439 470 2.6e-4 PFAM
Pfam:TPR_8 441 470 1.7e-3 PFAM
Pfam:Asp_Arg_Hydrox 574 728 7.6e-58 PFAM
Predicted Effect possibly damaging
Transcript: ENSMUST00000084915
AA Change: S244R

PolyPhen 2 Score 0.726 (Sensitivity: 0.86; Specificity: 0.92)
SMART Domains Protein: ENSMUSP00000081978
Gene: ENSMUSG00000028207
AA Change: S244R

DomainStartEndE-ValueType
low complexity region 9 40 N/A INTRINSIC
Pfam:Asp-B-Hydro_N 52 307 6.2e-105 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000108333
AA Change: S195R

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000103970
Gene: ENSMUSG00000028207
AA Change: S195R

DomainStartEndE-ValueType
Pfam:Asp-B-Hydro_N 14 128 5.8e-59 PFAM
Pfam:Asp-B-Hydro_N 121 258 8.8e-30 PFAM
Predicted Effect possibly damaging
Transcript: ENSMUST00000108334
AA Change: S206R

PolyPhen 2 Score 0.892 (Sensitivity: 0.82; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000103971
Gene: ENSMUSG00000028207
AA Change: S206R

DomainStartEndE-ValueType
Pfam:Asp-B-Hydro_N 14 269 3.8e-105 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000108335
AA Change: S149R

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000103972
Gene: ENSMUSG00000028207
AA Change: S149R

DomainStartEndE-ValueType
Pfam:Asp-B-Hydro_N 14 84 1.6e-49 PFAM
Pfam:Asp-B-Hydro_N 79 212 1.6e-29 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000108337
SMART Domains Protein: ENSMUSP00000103974
Gene: ENSMUSG00000028207

DomainStartEndE-ValueType
low complexity region 9 40 N/A INTRINSIC
Pfam:Asp-B-Hydro_N 52 291 1.8e-96 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000108339
SMART Domains Protein: ENSMUSP00000103976
Gene: ENSMUSG00000028207

DomainStartEndE-ValueType
Pfam:Asp-B-Hydro_N 1 224 1.6e-80 PFAM
Pfam:TPR_6 243 274 1.4e-4 PFAM
Pfam:TPR_16 245 315 2.5e-9 PFAM
Pfam:TPR_2 356 387 7e-4 PFAM
Pfam:Asp_Arg_Hydrox 489 646 5.3e-64 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000124408
Predicted Effect probably benign
Transcript: ENSMUST00000108340
SMART Domains Protein: ENSMUSP00000103977
Gene: ENSMUSG00000028207

DomainStartEndE-ValueType
low complexity region 9 40 N/A INTRINSIC
Pfam:Asp-B-Hydro_N 52 291 8.6e-96 PFAM
Pfam:TPR_6 310 341 1.9e-4 PFAM
Pfam:TPR_16 312 382 2.9e-9 PFAM
Pfam:TPR_2 423 454 6.8e-4 PFAM
Pfam:Asp_Arg_Hydrox 556 713 3.8e-64 PFAM
Meta Mutation Damage Score 0.1504 question?
Coding Region Coverage
  • 1x: 97.4%
  • 3x: 96.8%
  • 10x: 94.9%
  • 20x: 91.3%
Validation Efficiency 98% (86/88)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is thought to play an important role in calcium homeostasis. The gene is expressed from two promoters and undergoes extensive alternative splicing. The encoded set of proteins share varying amounts of overlap near their N-termini but have substantial variations in their C-terminal domains resulting in distinct functional properties. The longest isoforms (a and f) include a C-terminal Aspartyl/Asparaginyl beta-hydroxylase domain that hydroxylates aspartic acid or asparagine residues in the epidermal growth factor (EGF)-like domains of some proteins, including protein C, coagulation factors VII, IX, and X, and the complement factors C1R and C1S. Other isoforms differ primarily in the C-terminal sequence and lack the hydroxylase domain, and some have been localized to the endoplasmic and sarcoplasmic reticulum. Some of these isoforms are found in complexes with calsequestrin, triadin, and the ryanodine receptor, and have been shown to regulate calcium release from the sarcoplasmic reticulum. Some isoforms have been implicated in metastasis. [provided by RefSeq, Sep 2009]
PHENOTYPE: Homozygotes for a mutation lacking aspartyl beta-hydroxylase expression exhibit syndactyly, facial dysmorphology, mild hard palate defects, and reduced female fertility. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 85 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930533K18Rik T C 10: 70,711,058 (GRCm39) noncoding transcript Het
9430097D07Rik T C 2: 32,464,767 (GRCm39) probably benign Het
A2m C G 6: 121,618,383 (GRCm39) F225L probably damaging Het
Adamts19 T A 18: 59,087,692 (GRCm39) I574N probably damaging Het
Ankfn1 T C 11: 89,417,300 (GRCm39) D104G possibly damaging Het
Ankhd1 T A 18: 36,780,361 (GRCm39) N1804K probably benign Het
Ankle1 G T 8: 71,861,918 (GRCm39) V474F probably damaging Het
Arfgap3 A G 15: 83,227,340 (GRCm39) V24A probably benign Het
Cass4 A T 2: 172,269,615 (GRCm39) I568L probably benign Het
Cd84 A G 1: 171,700,317 (GRCm39) T145A possibly damaging Het
Cdx1 G A 18: 61,169,086 (GRCm39) A36V probably benign Het
Cep57 A T 9: 13,730,170 (GRCm39) S123T probably damaging Het
Clca3a2 T A 3: 144,519,681 (GRCm39) Q231L probably damaging Het
Clcnkb T C 4: 141,142,500 (GRCm39) probably benign Het
Crabp2 C A 3: 87,860,301 (GRCm39) T125K probably benign Het
Dennd3 A G 15: 73,426,950 (GRCm39) T776A possibly damaging Het
Dnajb6 T C 5: 29,990,091 (GRCm39) probably benign Het
Dsp T A 13: 38,380,593 (GRCm39) I1847N probably damaging Het
Dync1h1 T C 12: 110,599,362 (GRCm39) probably benign Het
Ecpas A G 4: 58,879,100 (GRCm39) I63T probably damaging Het
Fbn1 A C 2: 125,163,654 (GRCm39) F2067L possibly damaging Het
Fbxo16 T A 14: 65,532,835 (GRCm39) probably null Het
Gm3604 C A 13: 62,517,888 (GRCm39) G157* probably null Het
Gm5250 A G 1: 13,132,564 (GRCm39) noncoding transcript Het
Gpam A G 19: 55,067,007 (GRCm39) S503P possibly damaging Het
Herc4 T A 10: 63,099,950 (GRCm39) C124* probably null Het
Ift27 T C 15: 78,050,181 (GRCm39) D76G probably null Het
Igdcc3 C T 9: 65,090,034 (GRCm39) Q550* probably null Het
Igsf6 T A 7: 120,667,522 (GRCm39) I165F probably damaging Het
Il31ra T C 13: 112,677,773 (GRCm39) I173M probably damaging Het
Kbtbd6 G A 14: 79,690,045 (GRCm39) D247N probably benign Het
Kcnq2 T A 2: 180,742,350 (GRCm39) T394S probably benign Het
Mia2 A G 12: 59,196,361 (GRCm39) probably benign Het
Mvp T C 7: 126,591,933 (GRCm39) Q419R probably benign Het
Mylk A G 16: 34,773,152 (GRCm39) D1250G probably benign Het
Necab1 A G 4: 15,111,267 (GRCm39) Y54H probably damaging Het
Nlk T A 11: 78,477,853 (GRCm39) M297L probably benign Het
Nsl1 G T 1: 190,795,385 (GRCm39) M50I probably benign Het
Numa1 A G 7: 101,660,257 (GRCm39) T441A probably damaging Het
Ofd1 A G X: 165,189,002 (GRCm39) Y755H probably benign Het
Or10d1c G A 9: 38,894,190 (GRCm39) S50F probably damaging Het
Or6c69b C T 10: 129,627,000 (GRCm39) V153I probably benign Het
Or8b12i G A 9: 20,082,105 (GRCm39) T254I probably benign Het
Ovgp1 A T 3: 105,885,114 (GRCm39) H151L possibly damaging Het
Pigz G A 16: 31,763,397 (GRCm39) E152K probably damaging Het
Plxna1 A T 6: 89,312,446 (GRCm39) D779E probably benign Het
Ppil4 A T 10: 7,686,201 (GRCm39) E353V probably benign Het
Ptprq C T 10: 107,520,950 (GRCm39) G741S probably damaging Het
Rplp0 T C 5: 115,700,524 (GRCm39) Y231H probably benign Het
Rps24 A G 14: 24,541,830 (GRCm39) T6A probably damaging Het
Rundc3b T C 5: 8,629,050 (GRCm39) E117G probably damaging Het
Ryr2 A C 13: 11,760,062 (GRCm39) probably null Het
Ryr3 A T 2: 112,787,598 (GRCm39) M198K probably damaging Het
Sdhd T C 9: 50,508,500 (GRCm39) K122R probably benign Het
Senp2 T C 16: 21,861,810 (GRCm39) probably benign Het
Setd3 C A 12: 108,131,420 (GRCm39) G2V probably damaging Het
Sfxn5 A G 6: 85,244,927 (GRCm39) probably benign Het
She T A 3: 89,739,345 (GRCm39) S179T possibly damaging Het
Slc24a2 G A 4: 87,094,526 (GRCm39) T331I probably benign Het
Slc45a3 T C 1: 131,904,694 (GRCm39) W6R possibly damaging Het
Slc9a4 T C 1: 40,668,447 (GRCm39) S697P probably benign Het
Soat1 C T 1: 156,269,991 (GRCm39) V143I probably benign Het
Sp8 T A 12: 118,813,302 (GRCm39) F386I probably damaging Het
Spata31d1b A G 13: 59,864,381 (GRCm39) T510A probably benign Het
Srgap2 T A 1: 131,339,588 (GRCm39) I125F probably damaging Het
Stab2 T A 10: 86,793,680 (GRCm39) I472F possibly damaging Het
Taar7f C T 10: 23,925,546 (GRCm39) R47C probably benign Het
Tbc1d19 T A 5: 54,046,653 (GRCm39) probably null Het
Tbc1d21 T A 9: 58,274,011 (GRCm39) probably benign Het
Tcaf1 A G 6: 42,655,389 (GRCm39) I529T possibly damaging Het
Tgfbr2 A T 9: 116,004,035 (GRCm39) I24N possibly damaging Het
Tgm1 T C 14: 55,946,854 (GRCm39) T385A probably damaging Het
Tgm2 T C 2: 157,973,379 (GRCm39) N244S probably benign Het
Thoc5 T C 11: 4,864,517 (GRCm39) probably benign Het
Tmc2 A T 2: 130,076,789 (GRCm39) I372F probably damaging Het
Tnrc6a A G 7: 122,770,520 (GRCm39) D222G probably damaging Het
Trhde T G 10: 114,636,508 (GRCm39) N233T probably benign Het
Tstd3 T C 4: 21,759,475 (GRCm39) Y99C probably damaging Het
Ttc22 A T 4: 106,496,237 (GRCm39) D429V possibly damaging Het
Ugcg A G 4: 59,207,775 (GRCm39) N38S probably benign Het
Ush2a A G 1: 188,460,400 (GRCm39) I2554V possibly damaging Het
Usp16 A G 16: 87,276,204 (GRCm39) D513G probably damaging Het
Vip T C 10: 5,594,992 (GRCm39) probably null Het
Vmn1r4 A G 6: 56,934,023 (GRCm39) I176V probably benign Het
Zfp804b T C 5: 6,819,806 (GRCm39) T1050A probably damaging Het
Other mutations in Asph
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00516:Asph APN 4 9,639,322 (GRCm39) missense probably damaging 1.00
IGL00928:Asph APN 4 9,594,675 (GRCm39) missense probably benign 0.07
IGL01022:Asph APN 4 9,601,344 (GRCm39) missense possibly damaging 0.63
IGL01677:Asph APN 4 9,607,853 (GRCm39) missense probably damaging 1.00
IGL01907:Asph APN 4 9,514,643 (GRCm39) missense possibly damaging 0.59
IGL01958:Asph APN 4 9,474,904 (GRCm39) missense possibly damaging 0.93
IGL01976:Asph APN 4 9,475,471 (GRCm39) missense probably damaging 0.98
IGL01989:Asph APN 4 9,602,462 (GRCm39) splice site probably benign
IGL02379:Asph APN 4 9,474,980 (GRCm39) missense probably damaging 1.00
IGL02444:Asph APN 4 9,542,319 (GRCm39) splice site probably benign
IGL02652:Asph APN 4 9,529,984 (GRCm39) missense probably benign 0.11
IGL02679:Asph APN 4 9,601,349 (GRCm39) missense possibly damaging 0.63
IGL02735:Asph APN 4 9,598,759 (GRCm39) missense probably damaging 1.00
IGL02875:Asph APN 4 9,595,380 (GRCm39) missense probably damaging 1.00
IGL03022:Asph APN 4 9,517,668 (GRCm39) missense possibly damaging 0.48
R0026:Asph UTSW 4 9,601,361 (GRCm39) missense probably damaging 0.97
R0121:Asph UTSW 4 9,635,918 (GRCm39) missense probably damaging 1.00
R0357:Asph UTSW 4 9,453,314 (GRCm39) missense probably benign 0.01
R0410:Asph UTSW 4 9,595,415 (GRCm39) missense probably damaging 1.00
R0554:Asph UTSW 4 9,604,581 (GRCm39) missense probably damaging 0.99
R0577:Asph UTSW 4 9,604,620 (GRCm39) missense probably benign 0.02
R0718:Asph UTSW 4 9,514,683 (GRCm39) splice site probably benign
R0725:Asph UTSW 4 9,542,275 (GRCm39) missense probably damaging 1.00
R1383:Asph UTSW 4 9,537,807 (GRCm39) splice site probably null
R1654:Asph UTSW 4 9,453,315 (GRCm39) missense probably benign 0.31
R1694:Asph UTSW 4 9,610,869 (GRCm39) missense probably damaging 0.99
R1771:Asph UTSW 4 9,598,773 (GRCm39) missense probably damaging 0.99
R1840:Asph UTSW 4 9,601,340 (GRCm39) missense possibly damaging 0.60
R1911:Asph UTSW 4 9,453,335 (GRCm39) missense probably damaging 1.00
R1912:Asph UTSW 4 9,453,335 (GRCm39) missense probably damaging 1.00
R2117:Asph UTSW 4 9,517,671 (GRCm39) nonsense probably null
R2860:Asph UTSW 4 9,598,277 (GRCm39) missense probably damaging 1.00
R2861:Asph UTSW 4 9,598,277 (GRCm39) missense probably damaging 1.00
R2937:Asph UTSW 4 9,542,314 (GRCm39) splice site probably benign
R3907:Asph UTSW 4 9,474,934 (GRCm39) missense probably benign 0.23
R4154:Asph UTSW 4 9,639,250 (GRCm39) nonsense probably null
R4623:Asph UTSW 4 9,622,005 (GRCm39) missense possibly damaging 0.50
R4871:Asph UTSW 4 9,531,968 (GRCm39) missense probably benign 0.02
R5196:Asph UTSW 4 9,607,830 (GRCm39) missense probably damaging 0.99
R5540:Asph UTSW 4 9,635,906 (GRCm39) missense probably damaging 1.00
R5757:Asph UTSW 4 9,637,722 (GRCm39) splice site probably null
R6063:Asph UTSW 4 9,531,960 (GRCm39) missense probably benign 0.05
R6072:Asph UTSW 4 9,643,533 (GRCm39) critical splice donor site probably null
R7016:Asph UTSW 4 9,630,604 (GRCm39) splice site probably null
R7133:Asph UTSW 4 9,484,575 (GRCm39) missense probably benign 0.01
R7154:Asph UTSW 4 9,630,930 (GRCm39) missense possibly damaging 0.85
R7201:Asph UTSW 4 9,474,917 (GRCm39) missense probably damaging 1.00
R7316:Asph UTSW 4 9,537,746 (GRCm39) missense probably benign 0.11
R7455:Asph UTSW 4 9,531,732 (GRCm39) splice site probably null
R7516:Asph UTSW 4 9,630,940 (GRCm39) missense possibly damaging 0.92
R7517:Asph UTSW 4 9,517,697 (GRCm39) missense probably damaging 1.00
R7736:Asph UTSW 4 9,621,930 (GRCm39) missense possibly damaging 0.81
R7818:Asph UTSW 4 9,475,015 (GRCm39) missense probably damaging 1.00
R8356:Asph UTSW 4 9,537,722 (GRCm39) missense probably benign 0.04
R8456:Asph UTSW 4 9,537,722 (GRCm39) missense probably benign 0.04
R8768:Asph UTSW 4 9,453,417 (GRCm39) missense probably damaging 1.00
R8856:Asph UTSW 4 9,630,947 (GRCm39) missense possibly damaging 0.71
R9024:Asph UTSW 4 9,475,025 (GRCm39) missense probably damaging 1.00
R9125:Asph UTSW 4 9,474,928 (GRCm39) missense possibly damaging 0.58
R9390:Asph UTSW 4 9,635,927 (GRCm39) missense probably damaging 1.00
R9708:Asph UTSW 4 9,542,233 (GRCm39) missense probably damaging 1.00
Z1088:Asph UTSW 4 9,630,715 (GRCm39) missense possibly damaging 0.96
Predicted Primers PCR Primer
(F):5'- TTCCAGTAGGAGATGAGACAGAAGCTC -3'
(R):5'- AGACTTACGCCGCAGTGATACAATG -3'

Sequencing Primer
(F):5'- GATGAGACAGAAGCTCATAACACTC -3'
(R):5'- CCAATTAACAGTcaattgtgccac -3'
Posted On 2014-05-23