Mutagenetix > Incidental Mutation

Incidental Mutation 'R1742:Tnks2'

200470

Institutional Source

Beutler Lab

Gene Symbol

Tnks2

Ensembl Gene

ENSMUSG00000024811

Gene Name

tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2

Synonyms

5430432P15Rik

MMRRC Submission

039774-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R1742 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

36811632-36870877 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 36853661 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Leucine to Serine at position 749 (L749S)

Ref Sequence

ENSEMBL: ENSMUSP00000025729 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000025729] [ENSMUST00000164665] [ENSMUST00000167724]

AlphaFold

Q3UES3

Predicted Effect

probably damaging
Transcript: ENSMUST00000025729
AA Change: L749S

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000025729
Gene: ENSMUSG00000024811
AA Change: L749S

Domain	Start	End	E-Value	Type
low complexity region	2	18	N/A	INTRINSIC
ANK	57	86	8.07e-5	SMART
ANK	90	119	1.78e-6	SMART
ANK	123	152	6.46e-4	SMART
ANK	210	239	1.76e-5	SMART
ANK	243	272	3.91e-3	SMART
ANK	276	305	3.23e-4	SMART
ANK	363	395	1.57e-2	SMART
ANK	399	428	4.5e-3	SMART
ANK	432	461	4.89e-4	SMART
ANK	525	554	1.43e-5	SMART
ANK	558	587	6.55e-5	SMART
ANK	591	620	1.24e-5	SMART
low complexity region	641	659	N/A	INTRINSIC
ANK	678	707	1.69e-7	SMART
ANK	711	740	3.65e-3	SMART
ANK	744	773	3.36e-2	SMART
low complexity region	822	863	N/A	INTRINSIC
SAM	870	936	1.03e-10	SMART
Pfam:PARP	952	1157	4.9e-28	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000164665

SMART Domains

Protein: ENSMUSP00000132440
Gene: ENSMUSG00000024811

Domain	Start	End	E-Value	Type
ANK	3	32	6.55e-5	SMART
ANK	36	65	1.24e-5	SMART
low complexity region	86	104	N/A	INTRINSIC
ANK	123	152	1.69e-7	SMART
ANK	156	185	9.05e2	SMART
low complexity region	204	245	N/A	INTRINSIC
SAM	252	318	1.03e-10	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000166677

Predicted Effect

probably benign
Transcript: ENSMUST00000167724

SMART Domains

Protein: ENSMUSP00000126888
Gene: ENSMUSG00000024811

Domain	Start	End	E-Value	Type
ANK	84	113	4.89e-4	SMART
Blast:ANK	143	171	9e-10	BLAST
ANK	177	206	1.43e-5	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000168654

Coding Region Coverage

1x: 97.5%
3x: 96.9%
10x: 95.4%
20x: 92.7%

Validation Efficiency

MGI Phenotype

PHENOTYPE: Mice homozygous for a null allele are viable but display decreased body weight and abnormal adipocyte glucose uptake in response to insulin stimulation. Mice homozygous for a different null allele show partial postnatal lethality as well as decreased body weight. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 69 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Ankhd1	C	A	18: 36,758,318 (GRCm39)	A1004E	probably damaging	Het
Arfgef2	A	G	2: 166,708,900 (GRCm39)	S1071G	probably damaging	Het
Arhgef5	T	A	6: 43,257,133 (GRCm39)	I1228N	probably damaging	Het
Auh	G	A	13: 52,989,532 (GRCm39)	P308L	probably benign	Het
Bptf	A	G	11: 107,001,777 (GRCm39)	V445A	probably damaging	Het
Btf3	C	T	13: 98,452,804 (GRCm39)	M1I	probably null	Het
Bves	C	T	10: 45,223,961 (GRCm39)	T207M	probably damaging	Het
Ccdc171	T	A	4: 83,599,521 (GRCm39)	S779T	probably damaging	Het
Ccdc54	T	C	16: 50,410,601 (GRCm39)	K222E	possibly damaging	Het
Cebpe	A	G	14: 54,949,057 (GRCm39)	V120A	probably benign	Het
Clhc1	T	A	11: 29,507,647 (GRCm39)		probably null	Het
Col22a1	C	T	15: 71,673,762 (GRCm39)	G985S	unknown	Het
Col6a3	T	A	1: 90,741,516 (GRCm39)	I639F	probably damaging	Het
Cryga	C	A	1: 65,142,280 (GRCm39)	V38L	probably benign	Het
Dll3	T	C	7: 27,993,848 (GRCm39)	T530A	probably benign	Het
Dnaaf9	A	T	2: 130,582,315 (GRCm39)		probably null	Het
Dnah7a	G	A	1: 53,495,843 (GRCm39)	P3205S	probably benign	Het
Dpp10	T	A	1: 123,372,935 (GRCm39)	Y224F	probably damaging	Het
Eif1ad10	C	T	12: 88,216,453 (GRCm39)	D140N	unknown	Het
Fcrl2	T	C	3: 87,166,350 (GRCm39)	T142A	possibly damaging	Het
Fyttd1	C	T	16: 32,725,923 (GRCm39)	R175*	probably null	Het
Gm10277	TC	T	11: 77,676,828 (GRCm39)		probably null	Het
Gpr33	T	C	12: 52,071,045 (GRCm39)		probably null	Het
Gse1	T	A	8: 121,293,689 (GRCm39)	V205E	probably damaging	Het
Herc4	C	A	10: 63,123,728 (GRCm39)	N461K	probably benign	Het
Ifi206	G	A	1: 173,309,537 (GRCm39)	T153I	probably benign	Het
Iqca1	T	C	1: 90,025,773 (GRCm39)	I341V	probably benign	Het
Itsn1	T	G	16: 91,613,847 (GRCm39)		probably null	Het
Kcnk5	T	A	14: 20,191,925 (GRCm39)	Y412F	probably benign	Het
Lemd1	T	A	1: 132,156,036 (GRCm39)	I26K	probably damaging	Het
Lipc	A	T	9: 70,727,811 (GRCm39)	L12Q	probably damaging	Het
Lrrtm1	C	A	6: 77,221,074 (GRCm39)	P177Q	probably damaging	Het
Mcph1	G	A	8: 18,657,379 (GRCm39)	G73R	probably benign	Het
Msantd5f6	T	C	4: 73,319,447 (GRCm39)	D99G	probably damaging	Het
Myh11	A	T	16: 14,037,908 (GRCm39)	L899Q	probably damaging	Het
Myo18a	G	T	11: 77,732,293 (GRCm39)	R822L	probably damaging	Het
Nav3	T	C	10: 109,605,074 (GRCm39)	T1000A	probably benign	Het
Nox4	T	C	7: 86,945,026 (GRCm39)	V94A	possibly damaging	Het
Or10ag53	T	A	2: 87,083,122 (GRCm39)	N280K	probably benign	Het
Or4c123	G	T	2: 89,126,768 (GRCm39)	P282H	probably damaging	Het
Or7g32	A	G	9: 19,389,337 (GRCm39)	S67P	probably damaging	Het
Oxr1	T	C	15: 41,713,955 (GRCm39)	L679P	probably damaging	Het
Pcdhb17	T	C	18: 37,619,629 (GRCm39)	I473T	probably damaging	Het
Pgbd5	T	A	8: 125,107,046 (GRCm39)	E165D	probably damaging	Het
Pgpep1l	A	T	7: 67,886,802 (GRCm39)	V169D	probably damaging	Het
Phf12	C	T	11: 77,900,312 (GRCm39)	T136I	probably benign	Het
Pif1	T	A	9: 65,495,132 (GRCm39)	M14K	probably benign	Het
Pigr	A	G	1: 130,772,823 (GRCm39)	E347G	probably damaging	Het
Plekha3	G	A	2: 76,513,223 (GRCm39)	E103K	possibly damaging	Het
Ptgs2	A	G	1: 149,980,150 (GRCm39)	I363V	probably damaging	Het
Rasl11a	T	A	5: 146,783,805 (GRCm39)		probably null	Het
Recql	T	C	6: 142,310,298 (GRCm39)	T511A	probably damaging	Het
Rgl2	T	A	17: 34,156,197 (GRCm39)		probably null	Het
Rpp25l	T	C	4: 41,712,763 (GRCm39)	Y4C	probably damaging	Het
Sass6	T	G	3: 116,401,126 (GRCm39)	C156G	probably damaging	Het
Sgta	T	G	10: 80,882,111 (GRCm39)	N288T	probably damaging	Het
Slco1a4	T	A	6: 141,770,771 (GRCm39)	T282S	probably benign	Het
Smad4	T	C	18: 73,808,968 (GRCm39)	R100G	probably damaging	Het
Sox8	C	T	17: 25,786,915 (GRCm39)	V263M	probably damaging	Het
Sp8	A	G	12: 118,813,552 (GRCm39)	H469R	probably benign	Het
Spata1	A	T	3: 146,175,378 (GRCm39)		probably null	Het
Taar7a	G	A	10: 23,869,117 (GRCm39)	S88F	probably damaging	Het
Tollip	C	A	7: 141,446,592 (GRCm39)	R19L	probably damaging	Het
Tox2	G	A	2: 163,067,446 (GRCm39)	R55H	probably benign	Het
Vmn2r27	T	C	6: 124,177,636 (GRCm39)	E456G	possibly damaging	Het
Vmn2r77	T	A	7: 86,444,543 (GRCm39)	N65K	probably benign	Het
Vwf	T	C	6: 125,644,513 (GRCm39)	M2456T	probably benign	Het
Zfp526	A	G	7: 24,923,939 (GRCm39)	N66S	possibly damaging	Het
Zic1	T	C	9: 91,243,629 (GRCm39)	Y446C	probably damaging	Het

Other mutations in Tnks2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01325:Tnks2	APN	19	36,849,033 (GRCm39)	missense	probably benign	0.00
IGL01977:Tnks2	APN	19	36,849,990 (GRCm39)	critical splice donor site	probably null
IGL02389:Tnks2	APN	19	36,861,503 (GRCm39)	missense	probably benign	0.32
IGL02653:Tnks2	APN	19	36,849,851 (GRCm39)	missense	probably damaging	1.00
IGL02678:Tnks2	APN	19	36,823,143 (GRCm39)	missense	possibly damaging	0.63
R0053:Tnks2	UTSW	19	36,852,765 (GRCm39)	missense	probably damaging	1.00
R0053:Tnks2	UTSW	19	36,852,765 (GRCm39)	missense	probably damaging	1.00
R0426:Tnks2	UTSW	19	36,830,221 (GRCm39)	missense	probably damaging	1.00
R0436:Tnks2	UTSW	19	36,826,758 (GRCm39)	missense	possibly damaging	0.51
R0591:Tnks2	UTSW	19	36,849,962 (GRCm39)	missense	probably damaging	0.99
R0648:Tnks2	UTSW	19	36,839,474 (GRCm39)	splice site	probably null
R0894:Tnks2	UTSW	19	36,867,450 (GRCm39)	critical splice donor site	probably null
R1397:Tnks2	UTSW	19	36,857,901 (GRCm39)	splice site	probably benign
R1459:Tnks2	UTSW	19	36,822,931 (GRCm39)	splice site	probably benign
R1674:Tnks2	UTSW	19	36,849,022 (GRCm39)	missense	probably benign	0.03
R1928:Tnks2	UTSW	19	36,823,068 (GRCm39)	nonsense	probably null
R2025:Tnks2	UTSW	19	36,843,466 (GRCm39)	missense	probably damaging	0.99
R2898:Tnks2	UTSW	19	36,849,990 (GRCm39)	critical splice donor site	probably null
R4422:Tnks2	UTSW	19	36,823,053 (GRCm39)	missense	probably damaging	1.00
R4676:Tnks2	UTSW	19	36,852,671 (GRCm39)	nonsense	probably null
R5202:Tnks2	UTSW	19	36,866,252 (GRCm39)	missense	probably damaging	1.00
R5357:Tnks2	UTSW	19	36,826,690 (GRCm39)	splice site	silent
R5467:Tnks2	UTSW	19	36,859,176 (GRCm39)	missense	probably damaging	1.00
R5550:Tnks2	UTSW	19	36,839,746 (GRCm39)	missense	probably damaging	1.00
R6119:Tnks2	UTSW	19	36,856,752 (GRCm39)	missense	possibly damaging	0.79
R6219:Tnks2	UTSW	19	36,843,604 (GRCm39)	intron	probably benign
R7270:Tnks2	UTSW	19	36,836,545 (GRCm39)	missense
R7309:Tnks2	UTSW	19	36,829,936 (GRCm39)	missense	probably damaging	1.00
R7310:Tnks2	UTSW	19	36,856,839 (GRCm39)	missense	probably benign	0.12
R7516:Tnks2	UTSW	19	36,849,064 (GRCm39)	missense	possibly damaging	0.85
R7823:Tnks2	UTSW	19	36,829,954 (GRCm39)	critical splice donor site	probably null
R7951:Tnks2	UTSW	19	36,839,555 (GRCm39)	missense
R7961:Tnks2	UTSW	19	36,829,901 (GRCm39)	missense	probably benign	0.15
R8009:Tnks2	UTSW	19	36,829,901 (GRCm39)	missense	probably benign	0.15
R8193:Tnks2	UTSW	19	36,832,353 (GRCm39)	missense	possibly damaging	0.70
R8919:Tnks2	UTSW	19	36,823,088 (GRCm39)	missense	probably damaging	0.97
R9329:Tnks2	UTSW	19	36,835,284 (GRCm39)	missense	probably damaging	1.00
Z1177:Tnks2	UTSW	19	36,866,280 (GRCm39)	missense	probably benign	0.10
Z1177:Tnks2	UTSW	19	36,811,977 (GRCm39)	missense	probably benign	0.20

Predicted Primers

PCR Primer
(F):5'- AGGGTAGGTACAGAGCCAGGCTTC -3'
(R):5'- TGGGCTTGTTGTTTCCCAACTACTG -3'

Sequencing Primer
(F):5'- tctgccagtctctgcctc -3'
(R):5'- GGGCTAAAACCATATTCACTATGCAG -3'

Posted On

2014-05-23