Incidental Mutation 'R0090:Vmn2r72'
ID 20142
Institutional Source Beutler Lab
Gene Symbol Vmn2r72
Ensembl Gene ENSMUSG00000051877
Gene Name vomeronasal 2, receptor 72
Synonyms EG244114, Vmn2r72-ps
MMRRC Submission 038377-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.089) question?
Stock # R0090 (G1)
Quality Score 225
Status Validated (trace)
Chromosome 7
Chromosomal Location 85386992-85404189 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 85404084 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Valine at position 36 (I36V)
Ref Sequence ENSEMBL: ENSMUSP00000133014 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000063425]
AlphaFold D3Z4N8
Predicted Effect probably benign
Transcript: ENSMUST00000063425
AA Change: I36V

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000133014
Gene: ENSMUSG00000051877
AA Change: I36V

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:ANF_receptor 82 469 2.3e-28 PFAM
Pfam:NCD3G 512 564 1.2e-18 PFAM
Pfam:7tm_3 594 832 4e-53 PFAM
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 98.9%
  • 3x: 98.0%
  • 10x: 95.7%
  • 20x: 91.4%
Validation Efficiency 99% (90/91)
Allele List at MGI
Other mutations in this stock
Total: 89 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2010315B03Rik T C 9: 124,057,789 (GRCm39) probably benign Het
4933427I04Rik A G 4: 123,754,775 (GRCm39) T230A possibly damaging Het
Acsm1 T C 7: 119,261,412 (GRCm39) probably benign Het
Acta1 T C 8: 124,620,396 (GRCm39) N14S probably damaging Het
Aff4 A G 11: 53,283,609 (GRCm39) T362A probably benign Het
Aggf1 A G 13: 95,501,467 (GRCm39) I305T probably benign Het
Ap4b1 A G 3: 103,727,745 (GRCm39) D325G possibly damaging Het
Ap4e1 C T 2: 126,906,905 (GRCm39) T1055I possibly damaging Het
Arhgef2 A T 3: 88,546,655 (GRCm39) Q496L probably damaging Het
Arhgef28 A G 13: 98,211,618 (GRCm39) F122L probably damaging Het
Baiap3 G A 17: 25,469,044 (GRCm39) probably benign Het
Casp8ap2 T A 4: 32,640,327 (GRCm39) H460Q probably damaging Het
Casz1 A G 4: 149,017,868 (GRCm39) T386A probably benign Het
Cd53 A T 3: 106,674,725 (GRCm39) V114E possibly damaging Het
Celsr2 A G 3: 108,300,643 (GRCm39) probably benign Het
Cfap300 T A 9: 8,027,184 (GRCm39) N118I probably benign Het
Chaf1b G T 16: 93,684,012 (GRCm39) A88S possibly damaging Het
Cldn10 A T 14: 119,111,612 (GRCm39) Y194F probably damaging Het
Clec2e A C 6: 129,072,181 (GRCm39) probably null Het
Cmpk2 A T 12: 26,528,021 (GRCm39) T413S probably benign Het
Col9a1 T A 1: 24,262,643 (GRCm39) probably null Het
Dchs1 G T 7: 105,405,139 (GRCm39) Q2468K probably benign Het
Ddx60 A G 8: 62,395,327 (GRCm39) D88G probably damaging Het
Dnah8 A G 17: 31,003,064 (GRCm39) R3588G probably benign Het
Ect2 T C 3: 27,169,625 (GRCm39) T774A probably benign Het
Ect2 C T 3: 27,192,651 (GRCm39) E431K probably null Het
Ern1 A G 11: 106,296,649 (GRCm39) V767A probably damaging Het
Fbln1 A C 15: 85,108,489 (GRCm39) E75A possibly damaging Het
Fgf5 C T 5: 98,409,846 (GRCm39) R132* probably null Het
Folh1 T C 7: 86,375,076 (GRCm39) probably benign Het
Gdf15 A T 8: 71,082,334 (GRCm39) H257Q probably damaging Het
Ghitm T C 14: 36,844,176 (GRCm39) T322A probably benign Het
Gm5709 A G 3: 59,526,192 (GRCm39) noncoding transcript Het
Hbb-y C T 7: 103,501,950 (GRCm39) probably null Het
Hmcn2 A T 2: 31,316,210 (GRCm39) D3771V probably damaging Het
Hspa12a T C 19: 58,787,941 (GRCm39) D627G probably benign Het
Idh2 T C 7: 79,747,662 (GRCm39) E286G probably damaging Het
Idh3b C A 2: 130,122,899 (GRCm39) A297S probably benign Het
Igsf3 A G 3: 101,342,968 (GRCm39) E535G probably damaging Het
Ilf3 T A 9: 21,306,710 (GRCm39) D314E probably damaging Het
Itgb8 A G 12: 119,166,298 (GRCm39) S78P probably benign Het
Itih5 G A 2: 10,169,495 (GRCm39) V31I probably benign Het
Kcnj2 T C 11: 110,963,853 (GRCm39) V415A probably benign Het
Kin A G 2: 10,090,584 (GRCm39) Q53R possibly damaging Het
Krt78 A T 15: 101,856,272 (GRCm39) M513K probably benign Het
Krtap4-8 A T 11: 99,671,312 (GRCm39) probably benign Het
Ltbr T C 6: 125,286,412 (GRCm39) probably benign Het
Mgat4a G A 1: 37,529,414 (GRCm39) T146I probably damaging Het
Mrps2 G C 2: 28,358,268 (GRCm39) W19C probably damaging Het
Mthfs T C 9: 89,093,344 (GRCm39) S33P probably damaging Het
Myh6 T C 14: 55,196,161 (GRCm39) D546G probably damaging Het
Nanos3 C T 8: 84,902,763 (GRCm39) R133Q probably damaging Het
Ndst2 T C 14: 20,777,335 (GRCm39) T553A probably damaging Het
Nlrp12 T C 7: 3,288,664 (GRCm39) E616G probably damaging Het
Nrde2 T C 12: 100,095,545 (GRCm39) probably benign Het
Nup210l G A 3: 90,119,086 (GRCm39) V1832I probably benign Het
Or1e1c G A 11: 73,266,402 (GRCm39) V276I probably benign Het
Or4k77 A T 2: 111,199,639 (GRCm39) I221F probably damaging Het
Pcm1 A T 8: 41,709,078 (GRCm39) E9D probably damaging Het
Pear1 A T 3: 87,661,649 (GRCm39) D541E possibly damaging Het
Peg10 A G 6: 4,756,063 (GRCm39) probably benign Het
Prss1 G A 6: 41,438,166 (GRCm39) R31Q probably benign Het
Ptpn13 T C 5: 103,717,369 (GRCm39) V1837A probably damaging Het
Rasgrp3 A G 17: 75,805,456 (GRCm39) D149G probably damaging Het
Reg3d A T 6: 78,355,466 (GRCm39) H8Q possibly damaging Het
Rhox4f A C X: 36,789,122 (GRCm39) V15G probably benign Het
Sacs T A 14: 61,442,889 (GRCm39) L1645H probably damaging Het
Slc16a5 A T 11: 115,355,751 (GRCm39) S71C probably damaging Het
Slc9a3 A G 13: 74,306,847 (GRCm39) E324G probably damaging Het
Smgc T C 15: 91,743,960 (GRCm39) V574A possibly damaging Het
Stac3 C T 10: 127,339,799 (GRCm39) probably benign Het
Supv3l1 A G 10: 62,265,485 (GRCm39) L685P probably benign Het
Taar2 G A 10: 23,817,393 (GRCm39) R311H probably benign Het
Tas2r125 G T 6: 132,887,361 (GRCm39) A250S probably benign Het
Tdrd6 C T 17: 43,939,132 (GRCm39) V639I probably benign Het
Thap12 T G 7: 98,365,100 (GRCm39) W423G probably damaging Het
Tmem245 T C 4: 56,899,410 (GRCm39) I217V probably benign Het
Trip12 T A 1: 84,709,857 (GRCm39) probably benign Het
Tshz3 T C 7: 36,468,317 (GRCm39) V102A probably benign Het
Ubap1 T C 4: 41,379,826 (GRCm39) S347P probably damaging Het
Usp10 C T 8: 120,679,935 (GRCm39) Q612* probably null Het
Vps37a T C 8: 40,980,030 (GRCm39) I63T possibly damaging Het
Whrn C A 4: 63,350,969 (GRCm39) R9L possibly damaging Het
Xrcc1 T C 7: 24,269,642 (GRCm39) Y401H probably damaging Het
Ylpm1 GCCTAAGCAGCAACCTAAG GCCTAAG 12: 85,075,814 (GRCm39) probably benign Het
Zfhx3 G A 8: 109,676,689 (GRCm39) D2580N possibly damaging Het
Zfhx4 A G 3: 5,308,685 (GRCm39) N637S probably damaging Het
Zfp268 A T 4: 145,349,195 (GRCm39) K211* probably null Het
Zyg11a A T 4: 108,058,544 (GRCm39) probably benign Het
Other mutations in Vmn2r72
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00931:Vmn2r72 APN 7 85,398,854 (GRCm39) missense probably benign 0.01
IGL01019:Vmn2r72 APN 7 85,387,542 (GRCm39) missense probably benign 0.26
IGL01445:Vmn2r72 APN 7 85,398,854 (GRCm39) missense probably benign 0.06
IGL02076:Vmn2r72 APN 7 85,387,575 (GRCm39) missense probably damaging 1.00
IGL02082:Vmn2r72 APN 7 85,387,374 (GRCm39) missense probably benign 0.00
IGL02086:Vmn2r72 APN 7 85,387,374 (GRCm39) missense probably benign 0.00
IGL02089:Vmn2r72 APN 7 85,387,374 (GRCm39) missense probably benign 0.00
IGL02125:Vmn2r72 APN 7 85,399,919 (GRCm39) missense probably benign 0.00
IGL02146:Vmn2r72 APN 7 85,387,170 (GRCm39) missense probably damaging 1.00
IGL02272:Vmn2r72 APN 7 85,399,901 (GRCm39) missense probably benign
IGL02514:Vmn2r72 APN 7 85,387,907 (GRCm39) missense possibly damaging 0.90
IGL02662:Vmn2r72 APN 7 85,387,391 (GRCm39) missense probably benign 0.26
IGL02697:Vmn2r72 APN 7 85,387,879 (GRCm39) missense probably benign 0.36
IGL02733:Vmn2r72 APN 7 85,401,021 (GRCm39) missense probably benign 0.05
IGL03070:Vmn2r72 APN 7 85,401,249 (GRCm39) splice site probably benign
IGL03150:Vmn2r72 APN 7 85,400,384 (GRCm39) missense probably damaging 1.00
IGL03159:Vmn2r72 APN 7 85,404,162 (GRCm39) missense probably benign 0.05
IGL03333:Vmn2r72 APN 7 85,400,075 (GRCm39) missense probably benign 0.10
R0081:Vmn2r72 UTSW 7 85,401,044 (GRCm39) missense probably benign 0.01
R0655:Vmn2r72 UTSW 7 85,387,319 (GRCm39) nonsense probably null
R0778:Vmn2r72 UTSW 7 85,398,947 (GRCm39) missense probably benign 0.00
R1169:Vmn2r72 UTSW 7 85,400,517 (GRCm39) missense probably benign 0.01
R1172:Vmn2r72 UTSW 7 85,401,152 (GRCm39) missense probably damaging 1.00
R1173:Vmn2r72 UTSW 7 85,401,152 (GRCm39) missense probably damaging 1.00
R1175:Vmn2r72 UTSW 7 85,401,152 (GRCm39) missense probably damaging 1.00
R1248:Vmn2r72 UTSW 7 85,398,396 (GRCm39) missense probably benign 0.02
R1302:Vmn2r72 UTSW 7 85,387,465 (GRCm39) missense probably damaging 1.00
R1506:Vmn2r72 UTSW 7 85,398,419 (GRCm39) missense probably benign
R1632:Vmn2r72 UTSW 7 85,401,000 (GRCm39) missense probably benign 0.13
R1775:Vmn2r72 UTSW 7 85,387,378 (GRCm39) missense probably benign 0.01
R1962:Vmn2r72 UTSW 7 85,398,369 (GRCm39) missense probably benign 0.00
R2201:Vmn2r72 UTSW 7 85,387,444 (GRCm39) missense probably benign 0.12
R2290:Vmn2r72 UTSW 7 85,387,549 (GRCm39) missense probably damaging 1.00
R2327:Vmn2r72 UTSW 7 85,387,464 (GRCm39) missense probably damaging 1.00
R2424:Vmn2r72 UTSW 7 85,400,161 (GRCm39) missense probably damaging 1.00
R2655:Vmn2r72 UTSW 7 85,400,477 (GRCm39) missense possibly damaging 0.95
R2860:Vmn2r72 UTSW 7 85,400,044 (GRCm39) missense probably damaging 0.99
R2861:Vmn2r72 UTSW 7 85,400,044 (GRCm39) missense probably damaging 0.99
R2862:Vmn2r72 UTSW 7 85,400,044 (GRCm39) missense probably damaging 0.99
R3009:Vmn2r72 UTSW 7 85,398,850 (GRCm39) missense probably benign 0.00
R3797:Vmn2r72 UTSW 7 85,387,285 (GRCm39) missense probably benign 0.44
R3798:Vmn2r72 UTSW 7 85,387,285 (GRCm39) missense probably benign 0.44
R3902:Vmn2r72 UTSW 7 85,398,943 (GRCm39) missense possibly damaging 0.52
R3959:Vmn2r72 UTSW 7 85,400,339 (GRCm39) missense probably benign 0.36
R3974:Vmn2r72 UTSW 7 85,399,017 (GRCm39) missense probably damaging 1.00
R4399:Vmn2r72 UTSW 7 85,387,708 (GRCm39) missense probably damaging 1.00
R4421:Vmn2r72 UTSW 7 85,387,708 (GRCm39) missense probably damaging 1.00
R4426:Vmn2r72 UTSW 7 85,387,036 (GRCm39) nonsense probably null
R4522:Vmn2r72 UTSW 7 85,401,134 (GRCm39) missense probably benign 0.44
R4523:Vmn2r72 UTSW 7 85,401,134 (GRCm39) missense probably benign 0.44
R4533:Vmn2r72 UTSW 7 85,401,134 (GRCm39) missense probably benign 0.44
R4691:Vmn2r72 UTSW 7 85,387,119 (GRCm39) nonsense probably null
R4781:Vmn2r72 UTSW 7 85,387,069 (GRCm39) missense probably benign 0.14
R4863:Vmn2r72 UTSW 7 85,399,806 (GRCm39) missense possibly damaging 0.91
R4952:Vmn2r72 UTSW 7 85,400,317 (GRCm39) missense probably benign
R4991:Vmn2r72 UTSW 7 85,400,338 (GRCm39) missense probably damaging 0.99
R4995:Vmn2r72 UTSW 7 85,387,693 (GRCm39) missense probably damaging 1.00
R5095:Vmn2r72 UTSW 7 85,387,061 (GRCm39) missense probably damaging 0.98
R5174:Vmn2r72 UTSW 7 85,387,048 (GRCm39) missense probably benign 0.00
R5276:Vmn2r72 UTSW 7 85,387,462 (GRCm39) missense possibly damaging 0.90
R5395:Vmn2r72 UTSW 7 85,400,105 (GRCm39) missense possibly damaging 0.71
R5560:Vmn2r72 UTSW 7 85,401,150 (GRCm39) missense probably damaging 0.96
R5933:Vmn2r72 UTSW 7 85,387,058 (GRCm39) missense probably benign 0.05
R6033:Vmn2r72 UTSW 7 85,387,137 (GRCm39) missense probably damaging 1.00
R6033:Vmn2r72 UTSW 7 85,387,137 (GRCm39) missense probably damaging 1.00
R6354:Vmn2r72 UTSW 7 85,399,747 (GRCm39) critical splice donor site probably null
R6362:Vmn2r72 UTSW 7 85,400,382 (GRCm39) missense probably damaging 1.00
R6594:Vmn2r72 UTSW 7 85,398,892 (GRCm39) missense probably benign 0.32
R6794:Vmn2r72 UTSW 7 85,387,204 (GRCm39) missense probably damaging 1.00
R7113:Vmn2r72 UTSW 7 85,399,011 (GRCm39) splice site probably null
R7189:Vmn2r72 UTSW 7 85,404,125 (GRCm39) missense probably benign 0.36
R7266:Vmn2r72 UTSW 7 85,387,482 (GRCm39) nonsense probably null
R7323:Vmn2r72 UTSW 7 85,399,771 (GRCm39) missense probably benign
R7426:Vmn2r72 UTSW 7 85,400,348 (GRCm39) missense probably benign
R7606:Vmn2r72 UTSW 7 85,400,362 (GRCm39) missense possibly damaging 0.91
R7651:Vmn2r72 UTSW 7 85,401,146 (GRCm39) missense probably damaging 1.00
R7688:Vmn2r72 UTSW 7 85,404,098 (GRCm39) missense probably benign 0.32
R7753:Vmn2r72 UTSW 7 85,399,834 (GRCm39) missense probably damaging 1.00
R7843:Vmn2r72 UTSW 7 85,398,838 (GRCm39) missense probably benign 0.01
R8157:Vmn2r72 UTSW 7 85,400,441 (GRCm39) missense probably benign 0.09
R8254:Vmn2r72 UTSW 7 85,400,227 (GRCm39) missense probably damaging 1.00
R8389:Vmn2r72 UTSW 7 85,401,168 (GRCm39) missense probably damaging 0.99
R8444:Vmn2r72 UTSW 7 85,387,383 (GRCm39) missense probably benign
R8989:Vmn2r72 UTSW 7 85,404,134 (GRCm39) missense probably benign 0.10
R9015:Vmn2r72 UTSW 7 85,398,388 (GRCm39) missense probably benign 0.01
R9080:Vmn2r72 UTSW 7 85,387,464 (GRCm39) missense probably damaging 1.00
R9269:Vmn2r72 UTSW 7 85,400,411 (GRCm39) missense probably benign 0.03
R9317:Vmn2r72 UTSW 7 85,404,022 (GRCm39) missense probably benign 0.04
R9509:Vmn2r72 UTSW 7 85,404,075 (GRCm39) missense probably benign
Z1176:Vmn2r72 UTSW 7 85,398,399 (GRCm39) missense probably damaging 0.99
Predicted Primers PCR Primer
(F):5'- ATTGGCAATTATGGGAGTCTCTCTGC -3'
(R):5'- TGATCTCAGATGCCGAGCCTAAGG -3'

Sequencing Primer
(F):5'- GCAAGGTCAATACCGTGTTTC -3'
(R):5'- CATTTGTCCTTTAGCAGTAGGTACAG -3'
Posted On 2013-04-11