Mutagenetix > Incidental Mutations

Incidental Mutation 'R1789:Cfap61'

201584

Institutional Source

Beutler Lab

Gene Symbol

Cfap61

Ensembl Gene

ENSMUSG00000037143

Gene Name

cilia and flagella associated protein 61

Synonyms

4930529M08Rik

MMRRC Submission

039820-MU

Accession Numbers

Genbank: NM_175280.3; Ensemble: ENSMUST00000133433

Is this an essential gene?

Non essential (E-score: 0.000) question?

Stock #

R1789 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

145934784-146215039 bp(+) (GRCm38)

Type of Mutation

critical splice donor site (2 bp from exon)

DNA Base Change (assembly)

T to C at 145939993 bp

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000116283 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000001818] [ENSMUST00000116398] [ENSMUST00000118002] [ENSMUST00000126415] [ENSMUST00000130168] [ENSMUST00000133433] [ENSMUST00000138774] [ENSMUST00000152515]

Predicted Effect

probably benign
Transcript: ENSMUST00000001818

SMART Domains

Protein: ENSMUSP00000001818
Gene: ENSMUSG00000001767

Domain	Start	End	E-Value	Type
low complexity region	13	24	N/A	INTRINSIC
low complexity region	30	52	N/A	INTRINSIC
HAT	61	93	4.57e-2	SMART
HAT	95	127	3.48e-7	SMART
HAT	129	161	3.33e-4	SMART
HAT	163	194	2.48e-3	SMART
HAT	196	227	1.32e-7	SMART
HAT	229	264	2.11e-6	SMART
HAT	266	300	2.07e0	SMART
Blast:HAT	310	342	1e-13	BLAST
HAT	344	378	3.88e-5	SMART
HAT	388	424	6.86e-6	SMART
HAT	426	457	1.92e2	SMART
HAT	459	491	1.29e-1	SMART
HAT	493	527	2e-7	SMART
HAT	529	560	8.07e-3	SMART
coiled coil region	566	596	N/A	INTRINSIC
low complexity region	655	676	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000116398

SMART Domains

Protein: ENSMUSP00000112099
Gene: ENSMUSG00000037143

Domain	Start	End	E-Value	Type
SCOP:d1b87a_	183	237	1e-3	SMART

Predicted Effect

probably null
Transcript: ENSMUST00000118002

SMART Domains

Protein: ENSMUSP00000113529
Gene: ENSMUSG00000037143

Domain	Start	End	E-Value	Type
transmembrane domain	133	155	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000126415

SMART Domains

Protein: ENSMUSP00000118626
Gene: ENSMUSG00000037143

Domain	Start	End	E-Value	Type
SCOP:d1b87a_	183	244	1e-5	SMART
low complexity region	355	368	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000130168

SMART Domains

Protein: ENSMUSP00000121294
Gene: ENSMUSG00000037143

Domain	Start	End	E-Value	Type
transmembrane domain	133	155	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000133433

SMART Domains

Protein: ENSMUSP00000118411
Gene: ENSMUSG00000037143

Domain	Start	End	E-Value	Type
Pfam:DUF4821	15	272	1.1e-96	PFAM
low complexity region	355	368	N/A	INTRINSIC
low complexity region	661	672	N/A	INTRINSIC
low complexity region	1172	1182	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000138774

SMART Domains

Protein: ENSMUSP00000120838
Gene: ENSMUSG00000037143

Domain	Start	End	E-Value	Type
low complexity region	14	27	N/A	INTRINSIC
transmembrane domain	49	71	N/A	INTRINSIC
SCOP:d1b87a_	99	153	2e-4	SMART

Predicted Effect

probably null
Transcript: ENSMUST00000152515

Coding Region Coverage

1x: 97.4%
3x: 96.8%
10x: 95.2%
20x: 92.1%

Validation Efficiency

Allele List at MGI

All alleles(2) : Targeted, other(2)

Other mutations in this stock

Total: 100 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcc5	G	A	16: 20,365,951	P986L	probably damaging	Het
Acad10	A	T	5: 121,631,393	Y667N	possibly damaging	Het
Ahi1	G	A	10: 20,963,115	G121D	probably benign	Het
Ampd1	T	A	3: 103,099,126	I690N	possibly damaging	Het
Amy1	C	A	3: 113,558,165	W425L	possibly damaging	Het
Arhgap27	A	T	11: 103,333,005	V823E	probably damaging	Het
Arhgef17	A	G	7: 100,929,870	S624P	probably damaging	Het
Arid5b	T	C	10: 68,186,067	H231R	probably damaging	Het
Aspscr1	C	A	11: 120,688,560	T78N	probably damaging	Het
Auts2	T	A	5: 131,472,450	T42S	probably damaging	Het
Ccdc171	A	G	4: 83,554,808	D158G	probably damaging	Het
Ces4a	G	A	8: 105,138,097	G69S	probably damaging	Het
Chrna5	T	C	9: 55,004,651	V245A	possibly damaging	Het
Cntnap5c	G	A	17: 58,013,921	G163R	probably damaging	Het
Col5a2	A	G	1: 45,378,305		probably null	Het
Col5a2	T	C	1: 45,394,776	Q759R	probably damaging	Het
Comp	A	G	8: 70,377,146	D340G	probably benign	Het
Cyfip1	T	A	7: 55,926,395	D1104E	probably damaging	Het
Dnah11	A	T	12: 118,038,780	S308T	probably damaging	Het
Dnah5	A	G	15: 28,270,426	H958R	probably benign	Het
Elp3	A	G	14: 65,547,919	Y478H	probably damaging	Het
Fat3	T	C	9: 16,376,985	Y414C	probably benign	Het
Fbxo10	C	A	4: 45,046,389	A574S	probably damaging	Het
Fsip2	G	T	2: 82,977,562	L1408F	probably benign	Het
Fubp3	T	C	2: 31,611,735	V425A	possibly damaging	Het
Gm7168	A	T	17: 13,949,584	R404S	probably benign	Het
Gm8773	A	T	5: 5,575,652	Q116L	possibly damaging	Het
Gpd1	T	G	15: 99,723,202	F299C	probably damaging	Het
Gpr137	C	T	19: 6,942,057		probably benign	Het
Grin3b	T	C	10: 79,973,408	S331P	probably benign	Het
Grk3	T	A	5: 112,941,718	I281F	probably damaging	Het
Hoxb7	T	A	11: 96,286,781	S18R	probably damaging	Het
Igf1r	C	T	7: 68,214,933	R1160*	probably null	Het
Itfg1	A	G	8: 85,725,512		probably null	Het
Itgb8	T	C	12: 119,202,455	I114V	probably benign	Het
Kcnk1	A	G	8: 126,025,384	E243G	possibly damaging	Het
Kif27	A	G	13: 58,344,008	L439P	probably damaging	Het
Kif2c	T	A	4: 117,167,361	Q279L	probably benign	Het
Kmt2d	A	T	15: 98,852,074		probably benign	Het
L3mbtl1	A	G	2: 162,974,502	T821A	probably benign	Het
Lrrc24	A	T	15: 76,722,578	M206K	probably benign	Het
Mamdc4	T	G	2: 25,567,622	K460Q	possibly damaging	Het
Maml2	C	G	9: 13,697,345	L30V	probably damaging	Het
Mc5r	C	G	18: 68,338,670		probably null	Het
Myo10	T	G	15: 25,726,525		probably null	Het
Myo1e	T	A	9: 70,338,784	L419Q	probably damaging	Het
Myo6	C	A	9: 80,300,572	H1115Q	probably damaging	Het
Myo7a	A	G	7: 98,107,095	V10A	probably damaging	Het
Myoz2	C	T	3: 123,026,127	R61H	probably damaging	Het
Ncdn	G	A	4: 126,752,003	R38C	probably damaging	Het
Nckap1	T	A	2: 80,520,556	T736S	probably benign	Het
Ncor2	G	A	5: 125,019,890	A2325V	probably damaging	Het
Nid2	T	A	14: 19,752,431	V140E	possibly damaging	Het
Nlrp9c	C	A	7: 26,380,490	D704Y	probably benign	Het
Notch3	T	A	17: 32,158,725	S126C	probably damaging	Het
Olfr1128	A	T	2: 87,544,983	L187H	probably damaging	Het
Olfr130	T	C	17: 38,067,948	I259T	probably damaging	Het
Olfr215	A	C	6: 116,582,697	F83C	probably damaging	Het
Olfr484	A	G	7: 108,124,915	F116S	probably benign	Het
Olfr804	T	C	10: 129,705,607	M243T	possibly damaging	Het
Olfr818	A	T	10: 129,945,582	L160*	probably null	Het
Pdzd7	A	G	19: 45,039,228	I269T	probably damaging	Het
Phf3	A	T	1: 30,806,206	D1299E	probably damaging	Het
Pitx2	T	A	3: 129,218,754	Y271N	probably damaging	Het
Polk	T	C	13: 96,496,632	E301G	probably damaging	Het
Prkdc	C	A	16: 15,739,524	N2230K	probably damaging	Het
Prlr	A	G	15: 10,322,536	E170G	probably benign	Het
Prss55	A	G	14: 64,075,730	I235T	probably damaging	Het
Psd3	T	C	8: 67,960,565	I724V	probably benign	Het
Rabep2	A	G	7: 126,438,799	T248A	possibly damaging	Het
Rbm26	T	A	14: 105,117,073	K949N	probably benign	Het
Rnf213	T	A	11: 119,440,221	D2085E	probably damaging	Het
Serpinb7	A	T	1: 107,450,273	H232L	possibly damaging	Het
Slu7	A	G	11: 43,445,242	Q484R	probably benign	Het
Smg1	A	G	7: 118,145,798	S3044P	possibly damaging	Het
Snrnp48	A	G	13: 38,221,360	D248G	possibly damaging	Het
Snrpc	C	A	17: 27,845,219	P66Q	unknown	Het
Snrpn	T	A	7: 59,983,459		probably benign	Het
Spag17	T	A	3: 99,939,356	S65R	possibly damaging	Het
Srsf6	C	A	2: 162,934,488		probably benign	Het
Stil	T	A	4: 115,041,782	M1203K	probably benign	Het
Syt17	T	C	7: 118,436,838	T106A	probably benign	Het
Tbx15	C	T	3: 99,352,246	Q478*	probably null	Het
Tg	A	T	15: 66,737,548	Q319L	probably benign	Het
Thada	A	G	17: 84,448,033	L243P	probably damaging	Het
Thada	G	T	17: 84,448,034	L243I	probably damaging	Het
Tnnt3	A	G	7: 142,512,364	R211G	probably damaging	Het
Togaram1	A	T	12: 65,002,635	Q1282L	possibly damaging	Het
Tpm3-rs7	T	G	14: 113,314,947	M91R	probably damaging	Het
Trappc9	G	A	15: 73,025,967	R377W	probably damaging	Het
Ttll7	T	G	3: 146,915,780	L378R	probably damaging	Het
Tyw1	T	G	5: 130,258,993	I22R	probably damaging	Het
Ubr3	T	C	2: 70,016,367	S1645P	possibly damaging	Het
Ubr4	T	C	4: 139,393,053	L263P	probably damaging	Het
Unc13c	T	C	9: 73,756,339	E1071G	possibly damaging	Het
Vmn2r44	G	T	7: 8,380,123	D157E	possibly damaging	Het
Vps16	C	T	2: 130,443,600	T821I	probably benign	Het
Washc4	T	C	10: 83,579,525	V793A	possibly damaging	Het
Wdr35	G	T	12: 8,977,435		probably null	Het
Zfp277	A	G	12: 40,364,085	F254L	probably benign	Het

Other mutations in Cfap61

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02838:Cfap61	APN	2	145947164	nonsense	probably null
IGL03024:Cfap61	APN	2	145939999	splice site	probably benign
1mM(1):Cfap61	UTSW	2	146200760	missense	probably damaging	1.00
R0006:Cfap61	UTSW	2	146077312	missense	probably benign	0.06
R0396:Cfap61	UTSW	2	145949944	missense	possibly damaging	0.88
R0458:Cfap61	UTSW	2	146008917	missense	probably benign	0.08
R0477:Cfap61	UTSW	2	145939916	missense	probably damaging	1.00
R0513:Cfap61	UTSW	2	146035295	missense	possibly damaging	0.93
R1104:Cfap61	UTSW	2	145951061	nonsense	probably null
R1413:Cfap61	UTSW	2	145963443	missense	probably benign	0.27
R1591:Cfap61	UTSW	2	146145458	missense	probably benign	0.17
R1599:Cfap61	UTSW	2	146012163	missense	probably benign
R1661:Cfap61	UTSW	2	146035319	splice site	probably null
R1665:Cfap61	UTSW	2	146035319	splice site	probably null
R1800:Cfap61	UTSW	2	146042622	missense	probably damaging	1.00
R2050:Cfap61	UTSW	2	146145473	missense	probably benign	0.26
R2202:Cfap61	UTSW	2	146214680	missense	probably damaging	1.00
R2220:Cfap61	UTSW	2	146036816	critical splice acceptor site	probably null
R2444:Cfap61	UTSW	2	146035319	splice site	probably null
R3779:Cfap61	UTSW	2	145950794	missense	probably damaging	1.00
R4668:Cfap61	UTSW	2	146143136	missense	probably damaging	0.99
R4705:Cfap61	UTSW	2	146035202	missense	probably damaging	1.00
R4763:Cfap61	UTSW	2	146017367	missense	probably benign	0.00
R4816:Cfap61	UTSW	2	146143100	missense	probably damaging	1.00
R5067:Cfap61	UTSW	2	146102036	missense	probably damaging	0.99
R5120:Cfap61	UTSW	2	146143160	nonsense	probably null
R5308:Cfap61	UTSW	2	146109988	missense	probably damaging	0.99
R5575:Cfap61	UTSW	2	146017393	missense	probably benign	0.31
R5834:Cfap61	UTSW	2	146129149	missense	probably benign	0.29
R5959:Cfap61	UTSW	2	145947133	missense	probably benign	0.00
R6190:Cfap61	UTSW	2	145947133	missense	probably benign	0.00
R6283:Cfap61	UTSW	2	146129102	splice site	probably null
R6786:Cfap61	UTSW	2	146045443	missense	possibly damaging	0.84
R6933:Cfap61	UTSW	2	145951050	splice site	probably null
R7071:Cfap61	UTSW	2	146001912	missense	probably benign	0.02
R7132:Cfap61	UTSW	2	146109950	missense	probably damaging	0.97
R7312:Cfap61	UTSW	2	146045470	nonsense	probably null
R7390:Cfap61	UTSW	2	146001882	missense	probably benign	0.00
R7446:Cfap61	UTSW	2	146153838	missense	probably benign	0.00
R7515:Cfap61	UTSW	2	146042725	missense	unknown
R7608:Cfap61	UTSW	2	145963531	missense	possibly damaging	0.73
R7609:Cfap61	UTSW	2	146112533	missense	unknown
R7780:Cfap61	UTSW	2	146153772	missense	possibly damaging	0.77
R7908:Cfap61	UTSW	2	146102099	missense	probably damaging	1.00
R7938:Cfap61	UTSW	2	146045456	missense	probably benign	0.09
R8054:Cfap61	UTSW	2	145973518	missense	probably damaging	1.00
R8153:Cfap61	UTSW	2	146200784	missense	probably benign	0.26
R8195:Cfap61	UTSW	2	145947175	missense	probably benign
R8224:Cfap61	UTSW	2	145939880	missense	probably benign
R8411:Cfap61	UTSW	2	145947183	missense	probably benign	0.01
R8702:Cfap61	UTSW	2	146200790	missense	probably benign
X0022:Cfap61	UTSW	2	146129090	missense	probably benign	0.28
Z1088:Cfap61	UTSW	2	146129227	missense	probably benign	0.27
Z1177:Cfap61	UTSW	2	146012162	missense	possibly damaging	0.77
Z1177:Cfap61	UTSW	2	146153800	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- AGCTAGCCTGTCATCTGAGATG -3'
(R):5'- CCATGAGATCAAGGCAGTGG -3'

Sequencing Primer
(F):5'- TGAGATGAGTAACAGACTTCCCTCTC -3'
(R):5'- GCAGTGGGCTCCCTTTTTG -3'

Posted On

2014-06-23