Mutagenetix > Incidental Mutation

Incidental Mutation 'R0092:Alpk3'

20279

Institutional Source

Beutler Lab

Gene Symbol

Alpk3

Ensembl Gene

ENSMUSG00000038763

Gene Name

alpha-kinase 3

Synonyms

Midori

MMRRC Submission

038379-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.459) question?

Stock #

R0092 (G1)

Quality Score

225

Status

Validated (trace)

Chromosome

Chromosomal Location

81057600-81105612 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 81092553 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Glycine at position 706 (D706G)

Ref Sequence

ENSEMBL: ENSMUSP00000102971 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000107348]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000107348
AA Change: D706G

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000102971
Gene: ENSMUSG00000038763
AA Change: D706G

Domain	Start	End	E-Value	Type
low complexity region	2	21	N/A	INTRINSIC
low complexity region	48	62	N/A	INTRINSIC
IGc2	89	159	2.78e-11	SMART
low complexity region	183	192	N/A	INTRINSIC
low complexity region	400	427	N/A	INTRINSIC
low complexity region	514	532	N/A	INTRINSIC
low complexity region	586	598	N/A	INTRINSIC
low complexity region	958	971	N/A	INTRINSIC
low complexity region	1048	1058	N/A	INTRINSIC
low complexity region	1076	1087	N/A	INTRINSIC
IG_like	1264	1330	5.73e-2	SMART
low complexity region	1350	1359	N/A	INTRINSIC
Alpha_kinase	1395	1592	1.17e-44	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000151115

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 98.9%
3x: 97.9%
10x: 95.1%
20x: 88.6%

Validation Efficiency

99% (112/113)

MGI Phenotype

PHENOTYPE: Mice homozygous for a gene-trappped allele exhibit altered cardiomyocyte architecture and develop a non-progressive cardiomyopathy that presents features of both hypertrophic and dilated forms of cardiomyopathy, [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 94 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4932438A13Rik	A	G	3: 37,028,159	D3790G	probably benign	Het
Abcg2	T	A	6: 58,685,777	S535T	probably benign	Het
Acad11	A	T	9: 104,090,341		probably benign	Het
Acadm	A	T	3: 153,941,875		probably benign	Het
Acot12	T	A	13: 91,741,565	M12K	probably damaging	Het
Actr2	A	T	11: 20,094,308	N99K	probably benign	Het
Adam2	G	A	14: 66,053,887	A314V	probably damaging	Het
Aes	G	A	10: 81,561,220	G10D	possibly damaging	Het
Agl	C	T	3: 116,793,804	R34Q	probably damaging	Het
Agrn	C	T	4: 156,178,953	R338H	probably damaging	Het
AI661453	A	G	17: 47,467,515		probably benign	Het
Apbb1	T	C	7: 105,559,154	E648G	probably damaging	Het
Astn2	C	A	4: 66,403,982	A127S	unknown	Het
Asxl2	T	C	12: 3,496,313	S366P	probably benign	Het
Bdh1	A	T	16: 31,447,562	K92*	probably null	Het
Cacna1g	C	T	11: 94,457,264	S666N	probably damaging	Het
Ces2b	A	G	8: 104,836,512	T361A	possibly damaging	Het
Col6a4	T	A	9: 106,013,314	E1927V	probably benign	Het
Ctnnb1	T	G	9: 120,952,863	I314S	possibly damaging	Het
Cyp2c66	T	C	19: 39,183,780		probably benign	Het
Dennd4c	T	A	4: 86,781,607	F232I	probably damaging	Het
Dennd5a	T	C	7: 109,899,806	N950S	possibly damaging	Het
Dhx30	T	C	9: 110,085,010	N14S	possibly damaging	Het
Dip2b	T	A	15: 100,202,265	V1004D	probably damaging	Het
Dnah1	A	C	14: 31,271,609	S2872A	probably benign	Het
Dnajc10	T	C	2: 80,325,682	V233A	probably damaging	Het
E230025N22Rik	A	G	18: 36,689,224	L162P	probably damaging	Het
Elmod3	T	C	6: 72,566,809	D333G	probably benign	Het
Epb41l3	T	A	17: 69,286,750	M846K	probably damaging	Het
Frem2	A	G	3: 53,589,796	Y1766H	probably benign	Het
Fxr2	T	C	11: 69,642,146		probably benign	Het
Gm14085	G	T	2: 122,517,597		probably benign	Het
Gm9833	G	A	3: 10,088,573	C134Y	possibly damaging	Het
Gmpr2	A	G	14: 55,677,945	R258G	probably benign	Het
Helb	T	C	10: 120,089,808	Y888C	probably damaging	Het
Hephl1	TTCCAGATGTCC	TTCC	9: 15,090,603		probably null	Het
Hipk2	T	C	6: 38,743,229	D482G	probably damaging	Het
Itgb4	G	T	11: 115,979,124	R44L	probably damaging	Het
Itih1	T	C	14: 30,940,863		probably benign	Het
Kit	T	A	5: 75,647,754	S719R	possibly damaging	Het
Krt13	G	A	11: 100,121,432	Q22*	probably null	Het
L3mbtl4	A	C	17: 68,425,703	R59S	probably benign	Het
Lpp	A	G	16: 24,761,602	S23G	probably benign	Het
Magi3	G	A	3: 104,050,964	Q602*	probably null	Het
Man2a1	A	G	17: 64,659,084		probably benign	Het
Muc5ac	A	G	7: 141,818,630	E2667G	possibly damaging	Het
Myo15b	C	G	11: 115,862,986	S842C	possibly damaging	Het
Naf1	T	A	8: 66,889,108	S462T	probably benign	Het
Necab3	T	C	2: 154,558,739	D34G	possibly damaging	Het
Nisch	C	A	14: 31,191,453		probably benign	Het
Nlrc5	T	C	8: 94,489,594		probably benign	Het
Nmt1	T	C	11: 103,046,493	F119L	probably damaging	Het
Nod1	T	G	6: 54,944,541	D264A	probably damaging	Het
Nol8	C	T	13: 49,662,447	A677V	possibly damaging	Het
Nt5e	T	A	9: 88,370,285	F567I	probably benign	Het
Obscn	A	T	11: 59,051,247	M4434K	possibly damaging	Het
Olfr119	T	G	17: 37,700,805	L45R	probably damaging	Het
Olfr50	A	G	2: 36,793,496	T87A	probably benign	Het
Olfr512	T	C	7: 108,713,824	V145A	probably benign	Het
Olfr632	T	C	7: 103,937,727	S116P	probably damaging	Het
Olfr796	A	G	10: 129,608,221	S87P	probably damaging	Het
Opa1	A	T	16: 29,625,594	D866V	probably damaging	Het
Otop1	T	A	5: 38,299,830	V311E	probably damaging	Het
Pcsk2	A	G	2: 143,801,024	D407G	probably damaging	Het
Pdcd1	A	G	1: 94,052,424	W23R	possibly damaging	Het
Pigp	A	G	16: 94,365,462	V129A	probably damaging	Het
Pik3r5	A	G	11: 68,492,803	R483G	probably benign	Het
Pink1	A	G	4: 138,319,998	V225A	probably benign	Het
Plcl1	C	G	1: 55,696,765	Q422E	probably damaging	Het
Plec	T	C	15: 76,183,743	E1222G	probably benign	Het
Polr1a	T	C	6: 71,967,455		probably benign	Het
Prokr2	C	T	2: 132,373,597	V154M	probably damaging	Het
Rasgrp4	A	G	7: 29,145,132	R280G	possibly damaging	Het
Rmnd5b	T	C	11: 51,629,592	E8G	possibly damaging	Het
Sbf2	T	A	7: 110,320,806		probably benign	Het
Sec23b	A	G	2: 144,566,910	M172V	probably benign	Het
Setx	T	C	2: 29,146,293	V930A	probably benign	Het
Sft2d2	G	A	1: 165,179,260	A159V	possibly damaging	Het
Sh3gl1	G	T	17: 56,018,088	R250S	probably benign	Het
Skor1	C	A	9: 63,145,995	D231Y	probably damaging	Het
Slc24a1	T	G	9: 64,948,752	E291A	unknown	Het
Smc1b	A	T	15: 85,067,724		probably benign	Het
Tbccd1	A	T	16: 22,826,094	N177K	possibly damaging	Het
Tdp1	T	A	12: 99,954,989	Y595N	probably damaging	Het
Tmem108	T	C	9: 103,489,305	K496E	possibly damaging	Het
Tmprss7	T	C	16: 45,667,596	D490G	probably damaging	Het
Tnrc6b	A	T	15: 80,918,528	N1511Y	probably damaging	Het
Top2b	G	A	14: 16,409,263	R802Q	probably damaging	Het
Trip10	A	T	17: 57,250,798	K27N	possibly damaging	Het
Txlnb	A	G	10: 17,842,755	N445D	possibly damaging	Het
Txnrd1	T	A	10: 82,879,802	I159N	probably damaging	Het
Ulk1	C	A	5: 110,796,327	A164S	probably null	Het
Vmn2r83	T	C	10: 79,491,964	V802A	probably damaging	Het
Zbtb4	A	G	11: 69,779,351	I967V	probably benign	Het

Other mutations in Alpk3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00392:Alpk3	APN	7	81078009	missense	possibly damaging	0.95
IGL00472:Alpk3	APN	7	81095653	splice site	probably benign
IGL01732:Alpk3	APN	7	81057642	missense	unknown
IGL01750:Alpk3	APN	7	81092282	missense	probably damaging	1.00
IGL01812:Alpk3	APN	7	81100202	missense	probably damaging	1.00
IGL02224:Alpk3	APN	7	81076868	splice site	probably benign
IGL02292:Alpk3	APN	7	81077905	missense	possibly damaging	0.46
IGL02340:Alpk3	APN	7	81078507	missense	probably benign	0.03
IGL02517:Alpk3	APN	7	81077895	missense	probably benign	0.00
IGL02725:Alpk3	APN	7	81093610	missense	possibly damaging	0.91
IGL02755:Alpk3	APN	7	81093759	missense	possibly damaging	0.71
IGL03035:Alpk3	APN	7	81078604	missense	probably benign	0.00
IGL03102:Alpk3	APN	7	81095056	critical splice donor site	probably null
IGL03153:Alpk3	APN	7	81093395	missense	probably benign	0.00
IGL03255:Alpk3	APN	7	81092562	missense	probably benign	0.01
IGL03367:Alpk3	APN	7	81094990	missense	probably benign	0.01
FR4304:Alpk3	UTSW	7	81077762	small insertion	probably benign
FR4737:Alpk3	UTSW	7	81077762	small insertion	probably benign
IGL03097:Alpk3	UTSW	7	81093909	missense	probably benign	0.00
R0254:Alpk3	UTSW	7	81076974	missense	probably benign	0.43
R0310:Alpk3	UTSW	7	81078610	missense	possibly damaging	0.61
R0325:Alpk3	UTSW	7	81067953	missense	possibly damaging	0.58
R0387:Alpk3	UTSW	7	81104227	missense	possibly damaging	0.93
R0971:Alpk3	UTSW	7	81092579	missense	possibly damaging	0.55
R1078:Alpk3	UTSW	7	81078600	missense	probably benign
R1146:Alpk3	UTSW	7	81077595	missense	probably damaging	0.99
R1146:Alpk3	UTSW	7	81077595	missense	probably damaging	0.99
R1168:Alpk3	UTSW	7	81103357	missense	probably damaging	1.00
R1306:Alpk3	UTSW	7	81093873	missense	probably damaging	1.00
R1822:Alpk3	UTSW	7	81076931	nonsense	probably null
R2173:Alpk3	UTSW	7	81076900	missense	probably damaging	1.00
R2350:Alpk3	UTSW	7	81094970	missense	probably damaging	1.00
R2414:Alpk3	UTSW	7	81092753	missense	probably benign	0.02
R2417:Alpk3	UTSW	7	81092753	missense	probably benign	0.02
R2885:Alpk3	UTSW	7	81100192	missense	probably damaging	1.00
R3004:Alpk3	UTSW	7	81103355	nonsense	probably null
R3796:Alpk3	UTSW	7	81092753	missense	probably benign	0.02
R3797:Alpk3	UTSW	7	81092753	missense	probably benign	0.02
R3798:Alpk3	UTSW	7	81092753	missense	probably benign	0.02
R3799:Alpk3	UTSW	7	81092753	missense	probably benign	0.02
R3894:Alpk3	UTSW	7	81078390	missense	possibly damaging	0.93
R4395:Alpk3	UTSW	7	81094955	missense	probably damaging	1.00
R4761:Alpk3	UTSW	7	81104168	missense	probably damaging	0.99
R5505:Alpk3	UTSW	7	81078561	missense	possibly damaging	0.87
R5540:Alpk3	UTSW	7	81095436	missense	probably damaging	1.00
R5770:Alpk3	UTSW	7	81078562	missense	probably benign	0.02
R5941:Alpk3	UTSW	7	81078653	missense	probably damaging	1.00
R5964:Alpk3	UTSW	7	81092260	missense	possibly damaging	0.88
R6036:Alpk3	UTSW	7	81093257	missense	probably benign	0.34
R6036:Alpk3	UTSW	7	81093257	missense	probably benign	0.34
R6066:Alpk3	UTSW	7	81076950	missense	possibly damaging	0.89
R6517:Alpk3	UTSW	7	81078579	missense	possibly damaging	0.54
R6578:Alpk3	UTSW	7	81078684	missense	probably benign	0.00
R7230:Alpk3	UTSW	7	81093294	missense	probably damaging	1.00
R7266:Alpk3	UTSW	7	81092580	missense	possibly damaging	0.55
R7271:Alpk3	UTSW	7	81078454	missense	possibly damaging	0.92
R7402:Alpk3	UTSW	7	81076912	missense	probably benign	0.29
R7411:Alpk3	UTSW	7	81092852	missense	probably benign	0.11
R7454:Alpk3	UTSW	7	81078562	missense	probably benign	0.02
R7468:Alpk3	UTSW	7	81100998	nonsense	probably null
R7940:Alpk3	UTSW	7	81093945	missense	probably damaging	1.00
R8157:Alpk3	UTSW	7	81093722	missense	probably benign	0.00
R8246:Alpk3	UTSW	7	81092776	missense	probably benign	0.00
R8357:Alpk3	UTSW	7	81093318	missense	probably damaging	1.00
R8444:Alpk3	UTSW	7	81057720	missense	probably benign	0.08
R8457:Alpk3	UTSW	7	81093318	missense	probably damaging	1.00
R8775:Alpk3	UTSW	7	81077850	missense	probably benign	0.00
R8775-TAIL:Alpk3	UTSW	7	81077850	missense	probably benign	0.00
R8794:Alpk3	UTSW	7	81057655	missense	unknown
R8982:Alpk3	UTSW	7	81099002	missense	probably damaging	1.00
R9259:Alpk3	UTSW	7	81093554	missense	probably damaging	1.00
R9343:Alpk3	UTSW	7	81092331	missense	probably benign	0.27
R9567:Alpk3	UTSW	7	81092939	missense	possibly damaging	0.55
R9792:Alpk3	UTSW	7	81101133	critical splice donor site	probably null
R9793:Alpk3	UTSW	7	81101133	critical splice donor site	probably null
R9798:Alpk3	UTSW	7	81092652	missense	probably benign	0.02
RF034:Alpk3	UTSW	7	81092414	small deletion	probably benign
RF057:Alpk3	UTSW	7	81092417	frame shift	probably null
X0022:Alpk3	UTSW	7	81093897	missense	probably damaging	0.96
Z1176:Alpk3	UTSW	7	81078626	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- CGTCTCTGTTGATCACGACAGCTC -3'
(R):5'- ACCGCAGCATCAAGTCAGATCTTTC -3'

Sequencing Primer
(F):5'- TGATCACGACAGCTCTGGAAATC -3'
(R):5'- CAAGTCAGATCTTTCTTGGACACAG -3'

Posted On

2013-04-11