Mutagenetix > Incidental Mutation

Incidental Mutation 'R1862:Dot1l'

204048

Institutional Source

Beutler Lab

Gene Symbol

Dot1l

Ensembl Gene

ENSMUSG00000061589

Gene Name

DOT1 like histone lysine methyltransferase

Synonyms

KMT4, mDot1

MMRRC Submission

039885-MU

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R1862 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

80591040-80631295 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to T at 80619373 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Arginine to Leucine at position 193 (R193L)

Ref Sequence

ENSEMBL: ENSMUSP00000116581 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000105336] [ENSMUST00000127740] [ENSMUST00000150338]

AlphaFold

Q6XZL8

Predicted Effect

probably damaging
Transcript: ENSMUST00000105336
AA Change: R410L

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000100973
Gene: ENSMUSG00000061589
AA Change: R410L

Domain	Start	End	E-Value	Type
Pfam:DOT1	115	317	9.4e-86	PFAM
low complexity region	335	348	N/A	INTRINSIC
AT_hook	407	419	4.64e-1	SMART
low complexity region	437	447	N/A	INTRINSIC
coiled coil region	558	647	N/A	INTRINSIC
low complexity region	917	936	N/A	INTRINSIC
low complexity region	948	961	N/A	INTRINSIC
low complexity region	1084	1095	N/A	INTRINSIC
low complexity region	1145	1157	N/A	INTRINSIC
low complexity region	1186	1198	N/A	INTRINSIC
low complexity region	1436	1446	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000127740

Predicted Effect

probably damaging
Transcript: ENSMUST00000150338
AA Change: R193L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000116581
Gene: ENSMUSG00000061589
AA Change: R193L

Domain	Start	End	E-Value	Type
Pfam:DOT1	1	100	3.4e-37	PFAM
low complexity region	118	131	N/A	INTRINSIC
AT_hook	190	202	4.64e-1	SMART
low complexity region	220	230	N/A	INTRINSIC
low complexity region	371	390	N/A	INTRINSIC
SCOP:d1fxkc_	396	441	1e-3	SMART
low complexity region	700	719	N/A	INTRINSIC
low complexity region	731	744	N/A	INTRINSIC
low complexity region	867	878	N/A	INTRINSIC
low complexity region	928	940	N/A	INTRINSIC
low complexity region	969	981	N/A	INTRINSIC
low complexity region	1020	1032	N/A	INTRINSIC
low complexity region	1041	1055	N/A	INTRINSIC
low complexity region	1060	1105	N/A	INTRINSIC
low complexity region	1157	1174	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000163526

Coding Region Coverage

1x: 97.5%
3x: 96.8%
10x: 94.9%
20x: 90.5%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a histone methyltransferase that methylates lysine-79 of histone H3. It is inactive against free core histones, but shows significant histone methyltransferase activity against nucleosomes. [provided by RefSeq, Aug 2011]
PHENOTYPE: Mice homozygous for a gene trap allele show late embryonic lethality. Mice homozygous for a null allele die by E10.5 displaying a growth arrest, abnormal yolk sac angiogenesis and heart dilation while mutant ES cells show elevated apoptosis, G2 cell cycle arrest, telomere elongation and aneuploidy. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 82 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acox2	T	A	14: 8,241,416 (GRCm38)	E565D	probably benign	Het
Adam30	A	T	3: 98,069,429 (GRCm39)	K421*	probably null	Het
Atp6v1b1	A	G	6: 83,726,834 (GRCm39)		probably null	Het
Cacna1a	A	T	8: 85,142,559 (GRCm39)	I96F	possibly damaging	Het
Card10	G	A	15: 78,664,714 (GRCm39)	R747W	probably damaging	Het
Cdh8	T	A	8: 99,917,026 (GRCm39)	D363V	probably damaging	Het
Cecr2	T	C	6: 120,734,902 (GRCm39)	Y685H	probably damaging	Het
Cibar1	C	T	4: 12,155,717 (GRCm39)	V306I	possibly damaging	Het
Cmklr1	T	C	5: 113,752,468 (GRCm39)	T178A	probably damaging	Het
Col16a1	G	A	4: 129,986,575 (GRCm39)		probably null	Het
Col4a1	C	T	8: 11,276,439 (GRCm39)		probably benign	Het
Coro2a	T	A	4: 46,548,797 (GRCm39)	I166F	possibly damaging	Het
Cry2	T	C	2: 92,254,911 (GRCm39)	H148R	probably damaging	Het
Crygd	T	C	1: 65,101,133 (GRCm39)	Y154C	probably benign	Het
Cubn	T	C	2: 13,313,372 (GRCm39)	Y3066C	probably damaging	Het
Defb15	C	T	8: 22,420,002 (GRCm39)	E42K	possibly damaging	Het
Dnah12	A	G	14: 26,418,553 (GRCm39)	D147G	probably benign	Het
Dnah12	A	T	14: 26,430,412 (GRCm39)	Y340F	probably benign	Het
Dusp29	A	G	14: 21,736,757 (GRCm39)	V115A	probably benign	Het
Esd	A	C	14: 74,979,514 (GRCm39)	Y119S	probably damaging	Het
Esp36	A	G	17: 38,730,330 (GRCm39)		probably benign	Het
Etfbkmt	T	A	6: 149,045,649 (GRCm39)	M1K	probably null	Het
Exph5	A	G	9: 53,287,548 (GRCm39)	H1543R	probably benign	Het
Fbxo16	A	G	14: 65,508,252 (GRCm39)	T23A	probably damaging	Het
Gorasp2	C	A	2: 70,509,808 (GRCm39)	H136Q	probably damaging	Het
Hdc	T	A	2: 126,439,853 (GRCm39)	I367F	probably benign	Het
Hmcn1	C	T	1: 150,514,651 (GRCm39)	V3574M	probably benign	Het
Ilvbl	A	G	10: 78,419,958 (GRCm39)	D592G	probably benign	Het
Inmt	G	A	6: 55,151,868 (GRCm39)	A34V	probably damaging	Het
Ints9	A	C	14: 65,263,862 (GRCm39)	H378P	probably benign	Het
Kcnh7	T	A	2: 62,618,098 (GRCm39)	I464L	possibly damaging	Het
Kcnt2	T	A	1: 140,353,068 (GRCm39)	V259D	probably damaging	Het
Lipo3	A	G	19: 33,762,092 (GRCm39)	F135S	probably damaging	Het
Lrba	T	C	3: 86,680,510 (GRCm39)		probably null	Het
Mapk1	T	A	16: 16,844,293 (GRCm39)	S22T	probably benign	Het
Mbd3l2	T	C	9: 18,356,217 (GRCm39)	S181P	possibly damaging	Het
Mgat5	C	T	1: 127,387,706 (GRCm39)	P554L	probably damaging	Het
Mki67	T	C	7: 135,301,090 (GRCm39)	T1315A	probably benign	Het
Mprip	C	T	11: 59,649,047 (GRCm39)	T917M	possibly damaging	Het
Mroh3	T	A	1: 136,113,726 (GRCm39)	I688F	probably benign	Het
Myo1d	A	T	11: 80,553,874 (GRCm39)	Y536N	probably damaging	Het
Neb	C	T	2: 52,052,199 (GRCm39)		probably null	Het
Noc2l	A	G	4: 156,322,165 (GRCm39)	R161G	probably benign	Het
Nup54	T	A	5: 92,567,426 (GRCm39)	I375L	possibly damaging	Het
Nup93	T	C	8: 95,032,730 (GRCm39)	F539L	probably damaging	Het
Or10x1	T	A	1: 174,197,018 (GRCm39)	H178Q	probably damaging	Het
Or2n1e	A	G	17: 38,586,235 (GRCm39)	E191G	probably damaging	Het
Or5p57	A	C	7: 107,665,932 (GRCm39)	Y24*	probably null	Het
Or8b12	T	A	9: 37,658,264 (GRCm39)	M278K	probably benign	Het
Panx1	A	T	9: 14,918,724 (GRCm39)	D378E	probably damaging	Het
Papss1	T	A	3: 131,288,945 (GRCm39)	V170D	possibly damaging	Het
Pcnx1	T	C	12: 81,965,506 (GRCm39)	S558P	probably damaging	Het
Pde3a	G	T	6: 141,433,239 (GRCm39)	A757S	probably damaging	Het
Pde3a	T	A	6: 141,196,079 (GRCm39)	I255N	probably damaging	Het
Pdzph1	A	G	17: 59,229,578 (GRCm39)	Y1027H	probably damaging	Het
Pkhd1	G	T	1: 20,621,244 (GRCm39)	R805S	probably benign	Het
Polr1a	G	A	6: 71,886,187 (GRCm39)	G14D	probably damaging	Het
Prg4	T	A	1: 150,336,420 (GRCm39)	D60V	probably damaging	Het
Ptgr3	T	C	18: 84,113,443 (GRCm39)	V373A	possibly damaging	Het
Ptprc	T	C	1: 138,039,965 (GRCm39)	S311G	probably benign	Het
Rapgefl1	G	A	11: 98,733,035 (GRCm39)	R205K	probably benign	Het
Rcan2	A	T	17: 44,347,980 (GRCm39)		probably null	Het
Rock1	A	G	18: 10,079,207 (GRCm39)	I1087T	probably damaging	Het
Sectm1b	A	G	11: 120,945,768 (GRCm39)	I191T	possibly damaging	Het
Septin4	A	G	11: 87,458,061 (GRCm39)	H145R	possibly damaging	Het
Setd1b	T	C	5: 123,285,676 (GRCm39)	S241P	unknown	Het
Slco1a8	T	C	6: 141,949,149 (GRCm39)	M76V	possibly damaging	Het
Srpk2	T	C	5: 23,729,148 (GRCm39)	K497R	probably benign	Het
Sspo	T	C	6: 48,467,940 (GRCm39)	S4296P	probably damaging	Het
Syne4	T	C	7: 30,016,308 (GRCm39)	V168A	probably benign	Het
Tank	T	C	2: 61,480,256 (GRCm39)	F264S	probably damaging	Het
Ticrr	T	C	7: 79,344,955 (GRCm39)	S1607P	probably damaging	Het
Trim30a	A	G	7: 104,060,405 (GRCm39)	V457A	probably damaging	Het
Trim43b	T	A	9: 88,967,624 (GRCm39)	K336N	probably damaging	Het
Trim47	T	C	11: 115,996,963 (GRCm39)	Q598R	probably damaging	Het
Tspan12	T	C	6: 21,851,022 (GRCm39)	N18S	probably damaging	Het
Ubap2	A	G	4: 41,221,607 (GRCm39)	S231P	probably benign	Het
Vit	A	G	17: 78,930,175 (GRCm39)	D380G	probably damaging	Het
Vmn2r2	T	C	3: 64,041,942 (GRCm39)	N258D	possibly damaging	Het
Vmn2r52	C	T	7: 9,907,333 (GRCm39)	C131Y	possibly damaging	Het
Zfp58	A	T	13: 67,639,307 (GRCm39)	F395I	probably damaging	Het
Zfp940	C	A	7: 29,544,435 (GRCm39)	G491C	probably damaging	Het

Other mutations in Dot1l

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01836:Dot1l	APN	10	80,621,700 (GRCm39)	missense	probably benign	0.00
IGL01915:Dot1l	APN	10	80,616,728 (GRCm39)	missense	probably damaging	0.99
IGL02287:Dot1l	APN	10	80,600,443 (GRCm39)	missense	possibly damaging	0.66
IGL02695:Dot1l	APN	10	80,613,442 (GRCm39)	missense	probably damaging	1.00
IGL03058:Dot1l	APN	10	80,626,831 (GRCm39)	missense	probably benign	0.00
IGL03071:Dot1l	APN	10	80,624,513 (GRCm39)	missense	probably benign	0.00
IGL03120:Dot1l	APN	10	80,622,107 (GRCm39)	splice site	probably benign
R0220:Dot1l	UTSW	10	80,621,692 (GRCm39)	missense	probably damaging	0.99
R1342:Dot1l	UTSW	10	80,621,859 (GRCm39)	missense	probably benign	0.14
R1701:Dot1l	UTSW	10	80,626,576 (GRCm39)	missense	possibly damaging	0.93
R2094:Dot1l	UTSW	10	80,621,712 (GRCm39)	missense	probably damaging	1.00
R2308:Dot1l	UTSW	10	80,624,903 (GRCm39)	missense	probably damaging	1.00
R4274:Dot1l	UTSW	10	80,619,822 (GRCm39)	critical splice donor site	probably null
R4617:Dot1l	UTSW	10	80,620,918 (GRCm39)	missense	probably damaging	0.97
R4623:Dot1l	UTSW	10	80,617,984 (GRCm39)	missense	probably benign	0.18
R4690:Dot1l	UTSW	10	80,622,016 (GRCm39)	nonsense	probably null
R5009:Dot1l	UTSW	10	80,607,030 (GRCm39)	missense	probably benign	0.25
R5072:Dot1l	UTSW	10	80,620,480 (GRCm39)	missense	possibly damaging	0.83
R5073:Dot1l	UTSW	10	80,620,480 (GRCm39)	missense	possibly damaging	0.83
R5074:Dot1l	UTSW	10	80,620,480 (GRCm39)	missense	possibly damaging	0.83
R5305:Dot1l	UTSW	10	80,626,627 (GRCm39)	missense	probably benign	0.03
R5312:Dot1l	UTSW	10	80,620,471 (GRCm39)	missense	possibly damaging	0.94
R5512:Dot1l	UTSW	10	80,624,825 (GRCm39)	missense	possibly damaging	0.92
R5551:Dot1l	UTSW	10	80,619,462 (GRCm39)	small deletion	probably benign
R5552:Dot1l	UTSW	10	80,619,462 (GRCm39)	small deletion	probably benign
R5553:Dot1l	UTSW	10	80,619,462 (GRCm39)	small deletion	probably benign
R6056:Dot1l	UTSW	10	80,621,929 (GRCm39)	missense	probably damaging	0.96
R6207:Dot1l	UTSW	10	80,622,277 (GRCm39)	missense	probably benign	0.06
R6419:Dot1l	UTSW	10	80,627,315 (GRCm39)	missense	possibly damaging	0.85
R6782:Dot1l	UTSW	10	80,625,224 (GRCm39)	missense	probably damaging	1.00
R7054:Dot1l	UTSW	10	80,622,857 (GRCm39)	missense	probably damaging	0.99
R7071:Dot1l	UTSW	10	80,628,079 (GRCm39)	missense	probably benign	0.01
R7097:Dot1l	UTSW	10	80,626,560 (GRCm39)	missense	probably damaging	0.98
R7131:Dot1l	UTSW	10	80,628,175 (GRCm39)	missense	unknown
R7459:Dot1l	UTSW	10	80,609,007 (GRCm39)	missense	probably damaging	0.96
R7687:Dot1l	UTSW	10	80,625,202 (GRCm39)	missense	possibly damaging	0.70
R7741:Dot1l	UTSW	10	80,619,378 (GRCm39)	missense	probably damaging	1.00
R8513:Dot1l	UTSW	10	80,627,260 (GRCm39)	missense	possibly damaging	0.93
R8830:Dot1l	UTSW	10	80,607,033 (GRCm39)	missense	possibly damaging	0.68
R8881:Dot1l	UTSW	10	80,621,429 (GRCm39)	missense	probably damaging	1.00
R9069:Dot1l	UTSW	10	80,626,560 (GRCm39)	missense	probably damaging	0.98
R9438:Dot1l	UTSW	10	80,627,120 (GRCm39)	missense	probably benign
R9439:Dot1l	UTSW	10	80,621,438 (GRCm39)	missense	possibly damaging	0.71
R9664:Dot1l	UTSW	10	80,624,361 (GRCm39)	missense	probably damaging	1.00
R9671:Dot1l	UTSW	10	80,620,613 (GRCm39)	missense	probably damaging	1.00
R9727:Dot1l	UTSW	10	80,628,382 (GRCm39)	missense	unknown
R9787:Dot1l	UTSW	10	80,600,472 (GRCm39)	missense	probably benign	0.06
X0066:Dot1l	UTSW	10	80,624,518 (GRCm39)	missense	probably damaging	1.00
X0066:Dot1l	UTSW	10	80,624,517 (GRCm39)	missense	possibly damaging	0.94

Predicted Primers

PCR Primer
(F):5'- CTCAGCCTATGGTCTTGTGAG -3'
(R):5'- ACTGAGCTCCTCCTGGTTTG -3'

Sequencing Primer
(F):5'- GGTCTTGTGAGCACTCCTGC -3'
(R):5'- TGGCAGAGTCCCATAGTCACATG -3'

Posted On

2014-06-23