Mutagenetix > Incidental Mutations

Incidental Mutation 'R1850:Vmn1r201'

208021

Institutional Source

Beutler Lab

Gene Symbol

Vmn1r201

Ensembl Gene

ENSMUSG00000094898

Gene Name

vomeronasal 1 receptor 201

Synonyms

V1ri4

MMRRC Submission

039874-MU

Accession Numbers

Is this an essential gene?

Probably non essential (E-score: 0.176) question?

Stock #

R1850 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

22471923-22478701 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 22474631 bp

Zygosity

Heterozygous

Amino Acid Change

Asparagine to Serine at position 5 (N5S)

Ref Sequence

ENSEMBL: ENSMUSP00000154790 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000091730] [ENSMUST00000226330] [ENSMUST00000226965]

Predicted Effect

probably benign
Transcript: ENSMUST00000091730
AA Change: N5S

PolyPhen 2 Score 0.075 (Sensitivity: 0.93; Specificity: 0.85)

SMART Domains

Protein: ENSMUSP00000089324
Gene: ENSMUSG00000094898
AA Change: N5S

Domain	Start	End	E-Value	Type
Pfam:TAS2R	1	293	2.4e-9	PFAM
Pfam:V1R	35	299	1.1e-40	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000226330
AA Change: N5S

PolyPhen 2 Score 0.075 (Sensitivity: 0.93; Specificity: 0.85)

Predicted Effect

probably benign
Transcript: ENSMUST00000226965
AA Change: N5S

PolyPhen 2 Score 0.075 (Sensitivity: 0.93; Specificity: 0.85)

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 97.4%
3x: 96.8%
10x: 95.1%
20x: 91.8%

Validation Efficiency

99% (67/68)

Allele List at MGI

Other mutations in this stock

Total: 65 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4430402I18Rik	T	C	19: 28,939,171		probably null	Het
6030419C18Rik	A	T	9: 58,499,109	M101L	probably benign	Het
Adam28	T	A	14: 68,639,195	Q202L	probably benign	Het
Adgb	C	A	10: 10,442,502	V199F	probably damaging	Het
Aff1	G	T	5: 103,833,907	R645S	probably damaging	Het
Aoc1	C	T	6: 48,905,268	S48F	probably benign	Het
Atf6	A	T	1: 170,819,286	N339K	probably damaging	Het
Bpifb3	C	G	2: 153,929,344	S392C	possibly damaging	Het
Camk1d	T	C	2: 5,362,015	M130V	probably benign	Het
Ces1a	T	A	8: 93,027,326	N350Y	probably damaging	Het
Cfap57	G	A	4: 118,599,894	R453C	probably damaging	Het
Chd4	T	A	6: 125,121,656	N1532K	probably damaging	Het
Chd5	T	C	4: 152,370,533	L824P	probably damaging	Het
Ckap5	G	A	2: 91,595,713	R1306H	probably damaging	Het
Crybg1	A	G	10: 43,997,674	F1146S	probably damaging	Het
Dusp12	G	A	1: 170,880,629	T173M	probably benign	Het
Dync2h1	T	C	9: 7,001,448	T3854A	probably benign	Het
Echdc1	A	T	10: 29,344,603	I252F	probably damaging	Het
Emc1	A	T	4: 139,359,373		probably benign	Het
Fbn2	C	A	18: 58,039,305		probably benign	Het
Fsip2	T	A	2: 82,984,589	N3555K	possibly damaging	Het
Gabra1	T	A	11: 42,179,576	T20S	probably benign	Het
H2afy	T	C	13: 56,096,239		probably benign	Het
Igf1	A	C	10: 87,861,374	T2P	possibly damaging	Het
Jcad	C	A	18: 4,675,730	T1164N	possibly damaging	Het
Kalrn	A	T	16: 33,975,923	S2830T	probably damaging	Het
Lepr	C	A	4: 101,733,423	A66E	possibly damaging	Het
Lmntd1	T	A	6: 145,413,480	M315L	probably benign	Het
Lrch3	A	G	16: 32,986,793	T479A	probably benign	Het
Matr3	A	G	18: 35,582,057	N237D	probably damaging	Het
Mslnl	G	A	17: 25,742,934	V128M	probably damaging	Het
Mtif2	A	G	11: 29,540,683	I462M	probably benign	Het
Nrip1	T	C	16: 76,293,344	I442V	probably damaging	Het
Olfr1082	A	T	2: 86,594,104	C241*	probably null	Het
Olfr1415	T	A	1: 92,491,402	M118L	possibly damaging	Het
Olfr741	G	A	14: 50,485,598	A47T	probably benign	Het
Otogl	T	A	10: 107,878,064	Y498F	probably damaging	Het
Pbx3	A	T	2: 34,176,820	F351I	probably benign	Het
Pcdh18	T	C	3: 49,756,405	T154A	probably benign	Het
Pex5l	A	T	3: 32,950,876		probably null	Het
Plec	T	C	15: 76,188,232	I718V	probably benign	Het
Pparg	T	A	6: 115,450,980	Y143N	probably damaging	Het
Prl2c5	A	G	13: 13,185,792	I12V	probably benign	Het
Rcor3	T	A	1: 192,120,111	Q246L	probably benign	Het
Rnf214	A	T	9: 45,869,448		probably benign	Het
S1pr5	A	T	9: 21,244,129	S334T	probably benign	Het
Scg3	C	T	9: 75,682,167	S35N	possibly damaging	Het
Sept5	A	T	16: 18,625,210	L19Q	probably damaging	Het
Serpinb7	T	C	1: 107,428,295	F16S	probably damaging	Het
Sipa1l3	A	T	7: 29,339,126	S365R	probably damaging	Het
Slc27a1	T	C	8: 71,580,703		probably null	Het
Slc2a10	C	A	2: 165,515,213	H264Q	probably benign	Het
Slc9a3	A	G	13: 74,161,770	I526V	probably benign	Het
Smchd1	T	C	17: 71,389,771	D1203G	probably damaging	Het
Sult1b1	A	G	5: 87,520,841	W181R	probably damaging	Het
Supt6	A	G	11: 78,219,877		probably benign	Het
Tcf12	C	A	9: 71,868,215	A418S	probably damaging	Het
Tesk1	C	T	4: 43,443,576	R48C	probably damaging	Het
Tiam2	A	G	17: 3,437,235	Q677R	probably damaging	Het
Tspan8	C	T	10: 115,833,225	A55V	probably damaging	Het
Txndc11	T	C	16: 11,088,404	N421D	probably damaging	Het
Vmn2r120	T	A	17: 57,525,826	I118L	probably benign	Het
Vps13b	A	T	15: 35,674,959		probably benign	Het
Wdfy3	A	G	5: 101,894,999	V1962A	probably damaging	Het
Zswim8	C	T	14: 20,710,747	R107*	probably null	Het

Other mutations in Vmn1r201

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02792:Vmn1r201	APN	13	22474844	missense	probably damaging	0.97
IGL03137:Vmn1r201	APN	13	22474804	missense	probably benign	0.01
R0278:Vmn1r201	UTSW	13	22475024	missense	probably damaging	1.00
R0381:Vmn1r201	UTSW	13	22475023	missense	probably damaging	1.00
R0544:Vmn1r201	UTSW	13	22475146	missense	probably benign	0.04
R1411:Vmn1r201	UTSW	13	22474679	missense	probably benign	0.01
R1544:Vmn1r201	UTSW	13	22474798	missense	probably benign	0.20
R1891:Vmn1r201	UTSW	13	22475255	missense	probably benign	0.01
R2071:Vmn1r201	UTSW	13	22474825	missense	probably benign	0.34
R4183:Vmn1r201	UTSW	13	22474852	missense	probably benign	0.01
R4924:Vmn1r201	UTSW	13	22474712	missense	probably benign	0.00
R4989:Vmn1r201	UTSW	13	22475452	missense	possibly damaging	0.95
R5028:Vmn1r201	UTSW	13	22475360	nonsense	probably null
R5318:Vmn1r201	UTSW	13	22474922	missense	probably damaging	1.00
R5369:Vmn1r201	UTSW	13	22475502	missense	probably benign	0.00
R5682:Vmn1r201	UTSW	13	22475185	missense	probably damaging	0.99
R5699:Vmn1r201	UTSW	13	22475239	missense	probably damaging	1.00
R6180:Vmn1r201	UTSW	13	22475329	missense	possibly damaging	0.94
R6273:Vmn1r201	UTSW	13	22475215	missense	probably damaging	1.00
R6295:Vmn1r201	UTSW	13	22475363	missense	probably benign	0.00
R6331:Vmn1r201	UTSW	13	22475351	missense	probably damaging	1.00
R7296:Vmn1r201	UTSW	13	22475339	missense	possibly damaging	0.69
R7758:Vmn1r201	UTSW	13	22474819	missense	not run
R7832:Vmn1r201	UTSW	13	22475368	missense	possibly damaging	0.76
R7887:Vmn1r201	UTSW	13	22474786	missense	probably damaging	0.99
R7915:Vmn1r201	UTSW	13	22475368	missense	possibly damaging	0.76
R7970:Vmn1r201	UTSW	13	22474786	missense	probably damaging	0.99

Predicted Primers

PCR Primer
(F):5'- TGACTGTCGTCATTTCCATGG -3'
(R):5'- GATCCCTGTGCTACAAATAATGATC -3'

Sequencing Primer
(F):5'- ACTGTCGTCATTTCCATGGGAATAG -3'
(R):5'- TGATCAGATTAGAAAATGCCAAGTG -3'

Posted On

2014-06-23