Incidental Mutation 'R1864:Cyp3a25'
ID 208481
Institutional Source Beutler Lab
Gene Symbol Cyp3a25
Ensembl Gene ENSMUSG00000029630
Gene Name cytochrome P450, family 3, subfamily a, polypeptide 25
Synonyms
MMRRC Submission 039887-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.096) question?
Stock # R1864 (G1)
Quality Score 225
Status Not validated
Chromosome 5
Chromosomal Location 145914004-145946428 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 145931739 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Aspartic acid to Glycine at position 123 (D123G)
Ref Sequence ENSEMBL: ENSMUSP00000065585 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000068317] [ENSMUST00000138870] [ENSMUST00000145062]
AlphaFold O09158
Predicted Effect probably damaging
Transcript: ENSMUST00000068317
AA Change: D123G

PolyPhen 2 Score 0.981 (Sensitivity: 0.75; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000065585
Gene: ENSMUSG00000029630
AA Change: D123G

DomainStartEndE-ValueType
Pfam:p450 38 493 9.4e-129 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000138870
SMART Domains Protein: ENSMUSP00000116077
Gene: ENSMUSG00000029630

DomainStartEndE-ValueType
Pfam:p450 38 126 2e-13 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000145062
AA Change: D123G

PolyPhen 2 Score 0.242 (Sensitivity: 0.91; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000123615
Gene: ENSMUSG00000029630
AA Change: D123G

DomainStartEndE-ValueType
Pfam:p450 38 148 3.9e-21 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000153808
Coding Region Coverage
  • 1x: 97.3%
  • 3x: 96.7%
  • 10x: 95.1%
  • 20x: 92.1%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 112 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adgrg2 G A X: 159,265,347 (GRCm39) M532I probably benign Het
Agtpbp1 A G 13: 59,598,016 (GRCm39) Y1198H possibly damaging Het
Ahcyl2 G A 6: 29,908,354 (GRCm39) V575M probably damaging Het
Akp3 TCACCACCACCACCACCACCACCACCACCAC TCACCACCACCACCACCACCACCACCAC 1: 87,055,489 (GRCm39) probably benign Het
Ankrd50 A T 3: 38,508,610 (GRCm39) N329K probably benign Het
Ano4 C A 10: 88,807,253 (GRCm39) G741V probably damaging Het
Anxa1 T C 19: 20,357,053 (GRCm39) D191G probably benign Het
Apc2 C T 10: 80,149,482 (GRCm39) T1512I probably damaging Het
Aph1b A T 9: 66,701,395 (GRCm39) C81S probably benign Het
Arhgap21 T C 2: 20,866,015 (GRCm39) E893G probably damaging Het
Arhgef28 A T 13: 98,130,640 (GRCm39) H399Q probably benign Het
Asic5 A G 3: 81,919,294 (GRCm39) E304G probably benign Het
B4galnt4 A G 7: 140,650,446 (GRCm39) Y771C probably damaging Het
Birc2 G T 9: 7,819,518 (GRCm39) Q465K probably benign Het
Btla C T 16: 45,070,737 (GRCm39) T232I probably damaging Het
Ccl7 G T 11: 81,937,378 (GRCm39) K37N probably benign Het
Cdk17 T C 10: 93,061,967 (GRCm39) V233A probably damaging Het
Cenatac A G 9: 44,329,018 (GRCm39) C66R probably damaging Het
Cilp2 C A 8: 70,333,973 (GRCm39) Q1008H probably damaging Het
Clcn1 T A 6: 42,282,475 (GRCm39) D442E probably damaging Het
Clcnka T C 4: 141,120,113 (GRCm39) T269A probably damaging Het
Col12a1 A T 9: 79,534,385 (GRCm39) probably null Het
Cts6 A G 13: 61,349,393 (GRCm39) I105T probably benign Het
D630003M21Rik A T 2: 158,045,105 (GRCm39) L808Q probably damaging Het
Ddrgk1 A T 2: 130,496,215 (GRCm39) I270N probably damaging Het
Dhx15 T C 5: 52,342,043 (GRCm39) T92A possibly damaging Het
Dhx32 A T 7: 133,339,025 (GRCm39) C197S probably benign Het
Diaph2 G A X: 128,860,876 (GRCm39) R473Q probably damaging Het
Dnd1 A G 18: 36,899,057 (GRCm39) C11R possibly damaging Het
Dock1 A C 7: 134,748,236 (GRCm39) D1566A probably benign Het
Drp2 A G X: 133,327,864 (GRCm39) I43V probably benign Het
Ecm2 T C 13: 49,683,621 (GRCm39) V533A probably benign Het
Ecpas T A 4: 58,849,942 (GRCm39) H427L possibly damaging Het
Emilin1 A G 5: 31,075,934 (GRCm39) E725G probably damaging Het
Eml2 A G 7: 18,935,803 (GRCm39) Y487C probably damaging Het
Epg5 T A 18: 78,018,246 (GRCm39) L919H probably damaging Het
Fam187a T A 11: 102,776,837 (GRCm39) S214T probably damaging Het
Flna T C X: 73,283,869 (GRCm39) T521A probably benign Het
Foxi1 T A 11: 34,157,531 (GRCm39) I165F probably damaging Het
Fxr2 A T 11: 69,543,103 (GRCm39) K633N probably benign Het
Gdpd5 T C 7: 99,098,206 (GRCm39) I209T probably benign Het
Gmpr G T 13: 45,696,101 (GRCm39) V278F probably damaging Het
Grm7 A T 6: 111,057,384 (GRCm39) D328V probably benign Het
Heatr6 T C 11: 83,660,056 (GRCm39) S534P probably damaging Het
Heph A G X: 95,573,092 (GRCm39) T792A probably damaging Het
Hipk2 T A 6: 38,695,870 (GRCm39) probably null Het
Hps3 T A 3: 20,074,123 (GRCm39) probably null Het
Hspa5 T C 2: 34,664,553 (GRCm39) F336L probably damaging Het
Insc T C 7: 114,441,413 (GRCm39) I409T probably benign Het
Kcnj8 T A 6: 142,515,966 (GRCm39) H47L probably damaging Het
Kcnma1 T A 14: 23,853,230 (GRCm39) Q108L probably damaging Het
Klc3 A G 7: 19,131,966 (GRCm39) V137A probably damaging Het
Lcn2 T C 2: 32,275,434 (GRCm39) T194A possibly damaging Het
Lgr4 T A 2: 109,841,742 (GRCm39) F576I possibly damaging Het
Lypd6b A G 2: 49,837,459 (GRCm39) I144V possibly damaging Het
Mctp1 G A 13: 76,533,267 (GRCm39) C205Y possibly damaging Het
Mitf A T 6: 97,987,383 (GRCm39) N159I probably damaging Het
Morc1 T C 16: 48,412,893 (GRCm39) I678T probably benign Het
Muc4 A G 16: 32,576,625 (GRCm39) probably benign Het
Myo7a T C 7: 97,701,463 (GRCm39) Y2115C probably damaging Het
Myof T C 19: 37,975,153 (GRCm39) I182V probably benign Het
Ncor1 A G 11: 62,272,245 (GRCm39) V635A probably damaging Het
Neb G T 2: 52,102,772 (GRCm39) Y4257* probably null Het
Npr2 T A 4: 43,641,258 (GRCm39) V428E probably benign Het
Nufip2 A G 11: 77,583,124 (GRCm39) D346G probably damaging Het
Obsl1 G A 1: 75,469,753 (GRCm39) S1088F probably benign Het
Or10s1 T G 9: 39,986,081 (GRCm39) I163M possibly damaging Het
Or2ag1 T C 7: 106,313,030 (GRCm39) N286S possibly damaging Het
Or4c127 T A 2: 89,832,825 (GRCm39) V25E probably benign Het
Or4k38 C T 2: 111,166,052 (GRCm39) V124M possibly damaging Het
Or5ac22 A G 16: 59,135,378 (GRCm39) Y131H probably damaging Het
Or8b9 T A 9: 37,766,560 (GRCm39) Y149N probably damaging Het
Pdgfrb G A 18: 61,204,789 (GRCm39) V550I probably benign Het
Pi4ka A T 16: 17,185,389 (GRCm39) L237* probably null Het
Pla2r1 G A 2: 60,259,055 (GRCm39) T1111M probably benign Het
Plxnd1 A T 6: 115,946,402 (GRCm39) probably null Het
Pnp G C 14: 51,185,430 (GRCm39) A67P probably benign Het
Ppp1r3a A T 6: 14,718,404 (GRCm39) S837T probably damaging Het
Ppp2r5e C G 12: 75,516,341 (GRCm39) A239P probably damaging Het
Prom2 T C 2: 127,381,707 (GRCm39) D203G probably benign Het
Pum1 T C 4: 130,478,836 (GRCm39) V486A possibly damaging Het
Rnf115 A G 3: 96,635,153 (GRCm39) probably benign Het
Rsf1 ATGGCG ATGGCGACGGTGGCG 7: 97,229,111 (GRCm39) probably benign Het
Rusc2 C A 4: 43,421,719 (GRCm39) A713D possibly damaging Het
Ryr3 A T 2: 112,560,673 (GRCm39) H3009Q possibly damaging Het
Serpina1d C A 12: 103,734,256 (GRCm39) C16F probably benign Het
Serpinf2 G T 11: 75,328,309 (GRCm39) R80S possibly damaging Het
Sh2d4a C A 8: 68,781,967 (GRCm39) Q192K probably benign Het
Sh3d21 T A 4: 126,044,729 (GRCm39) probably null Het
Sh3rf2 T A 18: 42,187,046 (GRCm39) L55Q probably damaging Het
Shc4 T C 2: 125,481,287 (GRCm39) D255G probably damaging Het
Skint2 T A 4: 112,483,106 (GRCm39) H170Q probably benign Het
Slc29a4 A G 5: 142,703,509 (GRCm39) Y261C probably damaging Het
Slc35a5 A T 16: 44,964,071 (GRCm39) N102K possibly damaging Het
Slc38a3 A T 9: 107,533,152 (GRCm39) I307K probably damaging Het
Sv2b A T 7: 74,773,828 (GRCm39) S548T probably benign Het
Tgfbi T C 13: 56,780,694 (GRCm39) S524P probably benign Het
Tgm5 T C 2: 120,905,699 (GRCm39) D152G probably damaging Het
Tmem213 A G 6: 38,086,487 (GRCm39) T48A possibly damaging Het
Tmem37 A G 1: 119,995,952 (GRCm39) S42P probably damaging Het
Trpm1 A G 7: 63,917,764 (GRCm39) K1258R probably damaging Het
Ttc22 T C 4: 106,494,003 (GRCm39) V321A probably benign Het
Ube2c C A 2: 164,611,943 (GRCm39) A15E probably benign Het
Ubn2 T A 6: 38,417,425 (GRCm39) D154E possibly damaging Het
Umod A T 7: 119,062,478 (GRCm39) L631M probably damaging Het
Ush1c G A 7: 45,868,816 (GRCm39) Q373* probably null Het
Vmn1r238 T A 18: 3,123,040 (GRCm39) R125* probably null Het
Wnt8b T C 19: 44,482,029 (GRCm39) L14P probably benign Het
Wrn G A 8: 33,778,892 (GRCm39) A563V probably damaging Het
Zfp268 A T 4: 145,348,998 (GRCm39) Q145L possibly damaging Het
Zfp608 A G 18: 55,030,983 (GRCm39) S986P probably benign Het
Znrf3 T C 11: 5,233,373 (GRCm39) H228R possibly damaging Het
Other mutations in Cyp3a25
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00091:Cyp3a25 APN 5 145,938,273 (GRCm39) nonsense probably null
IGL00430:Cyp3a25 APN 5 145,930,170 (GRCm39) missense probably damaging 1.00
IGL00803:Cyp3a25 APN 5 145,938,253 (GRCm39) splice site probably benign
IGL00928:Cyp3a25 APN 5 145,923,764 (GRCm39) missense possibly damaging 0.94
IGL01557:Cyp3a25 APN 5 145,921,711 (GRCm39) missense probably damaging 1.00
IGL01997:Cyp3a25 APN 5 145,931,766 (GRCm39) missense possibly damaging 0.92
IGL02140:Cyp3a25 APN 5 145,946,273 (GRCm39) splice site probably benign
IGL02267:Cyp3a25 APN 5 145,935,362 (GRCm39) missense possibly damaging 0.48
IGL02272:Cyp3a25 APN 5 145,930,075 (GRCm39) intron probably benign
IGL02327:Cyp3a25 APN 5 145,923,731 (GRCm39) missense possibly damaging 0.50
IGL02411:Cyp3a25 APN 5 145,938,257 (GRCm39) critical splice donor site probably benign
IGL02504:Cyp3a25 APN 5 145,930,141 (GRCm39) missense probably benign 0.03
IGL02653:Cyp3a25 APN 5 145,939,920 (GRCm39) missense possibly damaging 0.95
R0378:Cyp3a25 UTSW 5 145,923,652 (GRCm39) missense probably damaging 1.00
R0403:Cyp3a25 UTSW 5 145,935,323 (GRCm39) missense probably damaging 1.00
R0685:Cyp3a25 UTSW 5 145,935,356 (GRCm39) missense probably damaging 1.00
R0725:Cyp3a25 UTSW 5 145,931,746 (GRCm39) missense probably damaging 1.00
R0798:Cyp3a25 UTSW 5 145,928,343 (GRCm39) missense probably damaging 0.98
R1061:Cyp3a25 UTSW 5 145,923,643 (GRCm39) missense probably benign
R1519:Cyp3a25 UTSW 5 145,938,257 (GRCm39) critical splice donor site probably null
R1628:Cyp3a25 UTSW 5 145,938,273 (GRCm39) nonsense probably null
R1822:Cyp3a25 UTSW 5 145,921,763 (GRCm39) missense probably damaging 1.00
R1824:Cyp3a25 UTSW 5 145,921,763 (GRCm39) missense probably damaging 1.00
R2062:Cyp3a25 UTSW 5 145,923,779 (GRCm39) splice site probably benign
R2401:Cyp3a25 UTSW 5 145,923,778 (GRCm39) critical splice acceptor site probably null
R2516:Cyp3a25 UTSW 5 145,939,837 (GRCm39) splice site probably null
R3080:Cyp3a25 UTSW 5 145,935,341 (GRCm39) missense probably benign 0.33
R3236:Cyp3a25 UTSW 5 145,939,938 (GRCm39) splice site probably benign
R3694:Cyp3a25 UTSW 5 145,926,786 (GRCm39) splice site probably null
R3730:Cyp3a25 UTSW 5 145,939,891 (GRCm39) missense probably damaging 1.00
R4112:Cyp3a25 UTSW 5 145,939,841 (GRCm39) missense probably benign 0.18
R4258:Cyp3a25 UTSW 5 145,928,248 (GRCm39) missense probably damaging 1.00
R4651:Cyp3a25 UTSW 5 145,931,701 (GRCm39) missense probably benign 0.01
R4788:Cyp3a25 UTSW 5 145,921,892 (GRCm39) nonsense probably null
R4899:Cyp3a25 UTSW 5 145,914,481 (GRCm39) missense possibly damaging 0.59
R4926:Cyp3a25 UTSW 5 145,928,266 (GRCm39) missense probably damaging 1.00
R4952:Cyp3a25 UTSW 5 145,928,334 (GRCm39) missense probably benign 0.01
R5270:Cyp3a25 UTSW 5 145,918,312 (GRCm39) missense probably benign 0.36
R5595:Cyp3a25 UTSW 5 145,931,673 (GRCm39) critical splice donor site probably null
R5659:Cyp3a25 UTSW 5 145,928,356 (GRCm39) missense possibly damaging 0.69
R5787:Cyp3a25 UTSW 5 145,935,313 (GRCm39) missense probably benign 0.14
R6307:Cyp3a25 UTSW 5 145,931,766 (GRCm39) missense possibly damaging 0.92
R6380:Cyp3a25 UTSW 5 145,935,357 (GRCm39) missense probably damaging 0.99
R7055:Cyp3a25 UTSW 5 145,929,801 (GRCm39) missense probably benign 0.00
R7140:Cyp3a25 UTSW 5 145,939,855 (GRCm39) missense probably benign
R7189:Cyp3a25 UTSW 5 145,939,870 (GRCm39) missense probably benign 0.37
R7201:Cyp3a25 UTSW 5 145,939,868 (GRCm39) missense probably benign 0.00
R7201:Cyp3a25 UTSW 5 145,928,257 (GRCm39) missense probably benign 0.22
R7332:Cyp3a25 UTSW 5 145,929,817 (GRCm39) missense probably damaging 1.00
R7404:Cyp3a25 UTSW 5 145,923,635 (GRCm39) missense probably damaging 1.00
R7548:Cyp3a25 UTSW 5 145,923,735 (GRCm39) missense probably damaging 0.98
R7607:Cyp3a25 UTSW 5 145,921,791 (GRCm39) missense possibly damaging 0.87
R8022:Cyp3a25 UTSW 5 145,914,478 (GRCm39) missense probably benign 0.33
R8266:Cyp3a25 UTSW 5 145,929,796 (GRCm39) missense probably damaging 1.00
R8894:Cyp3a25 UTSW 5 145,931,670 (GRCm39) splice site probably benign
R9249:Cyp3a25 UTSW 5 145,928,356 (GRCm39) missense possibly damaging 0.69
R9588:Cyp3a25 UTSW 5 145,921,699 (GRCm39) missense probably benign
R9691:Cyp3a25 UTSW 5 145,931,732 (GRCm39) missense probably benign 0.41
R9694:Cyp3a25 UTSW 5 145,923,685 (GRCm39) nonsense probably null
Predicted Primers PCR Primer
(F):5'- CTCTCCATCATTACCTCAGAGG -3'
(R):5'- ATGTGAAGCTGTGCCAGATG -3'

Sequencing Primer
(F):5'- TTACCTCAGAGGATCAACCCTTGG -3'
(R):5'- CTGTGCCAGATGGATAGATATCACC -3'
Posted On 2014-06-30