Incidental Mutation 'R1868:Rapgef6'
ID |
208974 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Rapgef6
|
Ensembl Gene |
ENSMUSG00000037533 |
Gene Name |
Rap guanine nucleotide exchange factor (GEF) 6 |
Synonyms |
PDZ-GEF2, C030018K18Rik, Pdzgef2, RA-GEF-2 |
MMRRC Submission |
039890-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R1868 (G1)
|
Quality Score |
217 |
Status
|
Validated
|
Chromosome |
11 |
Chromosomal Location |
54413673-54590111 bp(+) (GRCm39) |
Type of Mutation |
frame shift |
DNA Base Change (assembly) |
TG to TGG
at 54437223 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000147135
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000101206]
[ENSMUST00000102743]
[ENSMUST00000108895]
[ENSMUST00000207429]
|
AlphaFold |
Q5NCJ1 |
Predicted Effect |
probably null
Transcript: ENSMUST00000101206
|
SMART Domains |
Protein: ENSMUSP00000098766 Gene: ENSMUSG00000037533
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
10 |
82 |
1.45e-5 |
PROSPERO |
low complexity region
|
187 |
205 |
N/A |
INTRINSIC |
low complexity region
|
231 |
239 |
N/A |
INTRINSIC |
cNMP
|
280 |
398 |
4.8e-13 |
SMART |
RasGEFN
|
412 |
525 |
4.35e-33 |
SMART |
PDZ
|
540 |
612 |
8.86e-16 |
SMART |
low complexity region
|
694 |
705 |
N/A |
INTRINSIC |
RA
|
749 |
835 |
1.47e-20 |
SMART |
RasGEF
|
856 |
1095 |
5.35e-87 |
SMART |
low complexity region
|
1237 |
1250 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1293 |
N/A |
INTRINSIC |
low complexity region
|
1345 |
1364 |
N/A |
INTRINSIC |
low complexity region
|
1368 |
1380 |
N/A |
INTRINSIC |
low complexity region
|
1444 |
1452 |
N/A |
INTRINSIC |
low complexity region
|
1555 |
1568 |
N/A |
INTRINSIC |
low complexity region
|
1591 |
1604 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000102743
|
SMART Domains |
Protein: ENSMUSP00000099804 Gene: ENSMUSG00000037533
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
10 |
82 |
1.42e-5 |
PROSPERO |
low complexity region
|
187 |
205 |
N/A |
INTRINSIC |
low complexity region
|
231 |
239 |
N/A |
INTRINSIC |
cNMP
|
280 |
398 |
4.8e-13 |
SMART |
RasGEFN
|
412 |
525 |
4.35e-33 |
SMART |
PDZ
|
540 |
612 |
8.86e-16 |
SMART |
low complexity region
|
694 |
705 |
N/A |
INTRINSIC |
RA
|
749 |
835 |
1.47e-20 |
SMART |
RasGEF
|
856 |
1138 |
3.88e-84 |
SMART |
low complexity region
|
1229 |
1242 |
N/A |
INTRINSIC |
low complexity region
|
1262 |
1285 |
N/A |
INTRINSIC |
low complexity region
|
1337 |
1356 |
N/A |
INTRINSIC |
low complexity region
|
1360 |
1372 |
N/A |
INTRINSIC |
low complexity region
|
1436 |
1444 |
N/A |
INTRINSIC |
low complexity region
|
1547 |
1560 |
N/A |
INTRINSIC |
low complexity region
|
1583 |
1596 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000108895
|
SMART Domains |
Protein: ENSMUSP00000104523 Gene: ENSMUSG00000037533
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
10 |
82 |
1.95e-5 |
PROSPERO |
low complexity region
|
187 |
205 |
N/A |
INTRINSIC |
low complexity region
|
231 |
239 |
N/A |
INTRINSIC |
cNMP
|
280 |
398 |
4.8e-13 |
SMART |
RasGEFN
|
412 |
526 |
1.03e-25 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000139360
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000155132
|
Predicted Effect |
probably null
Transcript: ENSMUST00000207429
|
Meta Mutation Damage Score |
0.9755 |
Coding Region Coverage |
- 1x: 97.3%
- 3x: 96.8%
- 10x: 95.4%
- 20x: 93.0%
|
Validation Efficiency |
97% (115/118) |
MGI Phenotype |
PHENOTYPE: Mice homozygous for a null allele exhibit an inlarged spleen, increased IgE and IgG levels and altered cytokine production. [provided by MGI curators]
|
Allele List at MGI |
All alleles(16) : Targeted, knock-out(1) Targeted, other(2) Gene trapped(13) |
Other mutations in this stock |
Total: 115 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
9130230L23Rik |
A |
T |
5: 66,157,560 (GRCm39) |
M1K |
probably null |
Het |
A630073D07Rik |
C |
T |
6: 132,603,457 (GRCm39) |
E100K |
unknown |
Het |
Abcc3 |
T |
G |
11: 94,254,889 (GRCm39) |
D638A |
probably benign |
Het |
Acadm |
T |
C |
3: 153,635,889 (GRCm39) |
I272V |
probably benign |
Het |
Adam2 |
G |
A |
14: 66,315,107 (GRCm39) |
T22I |
probably damaging |
Het |
Aldh3b1 |
G |
A |
19: 3,971,271 (GRCm39) |
|
probably benign |
Het |
Arfgef3 |
A |
T |
10: 18,537,135 (GRCm39) |
I182K |
probably benign |
Het |
Arhgef17 |
A |
G |
7: 100,528,184 (GRCm39) |
S677P |
probably benign |
Het |
Atp2b1 |
T |
C |
10: 98,832,750 (GRCm39) |
V417A |
probably damaging |
Het |
Brca1 |
T |
A |
11: 101,388,839 (GRCm39) |
H1675L |
probably benign |
Het |
Brd10 |
A |
T |
19: 29,720,998 (GRCm39) |
S743T |
probably damaging |
Het |
Btd |
G |
T |
14: 31,389,266 (GRCm39) |
G329V |
probably benign |
Het |
Capsl |
T |
A |
15: 9,461,916 (GRCm39) |
L104* |
probably null |
Het |
Cbx1 |
T |
C |
11: 96,693,554 (GRCm39) |
S107P |
probably benign |
Het |
Cd207 |
G |
T |
6: 83,648,683 (GRCm39) |
Y326* |
probably null |
Het |
Cenpp |
T |
C |
13: 49,794,759 (GRCm39) |
D136G |
probably damaging |
Het |
Chsy3 |
A |
G |
18: 59,309,560 (GRCm39) |
|
probably null |
Het |
Cntrl |
T |
A |
2: 35,019,827 (GRCm39) |
H551Q |
probably benign |
Het |
Col14a1 |
T |
A |
15: 55,310,858 (GRCm39) |
|
probably benign |
Het |
Cybrd1 |
T |
A |
2: 70,967,978 (GRCm39) |
F183Y |
possibly damaging |
Het |
D5Ertd579e |
G |
A |
5: 36,773,771 (GRCm39) |
S208L |
probably damaging |
Het |
Dlg2 |
A |
T |
7: 92,036,160 (GRCm39) |
K719* |
probably null |
Het |
Dppa1 |
A |
T |
11: 46,516,393 (GRCm39) |
|
probably null |
Het |
Dse |
A |
G |
10: 34,029,284 (GRCm39) |
V602A |
possibly damaging |
Het |
Elapor2 |
T |
A |
5: 9,529,251 (GRCm39) |
I1028K |
probably damaging |
Het |
Elmo1 |
C |
T |
13: 20,773,823 (GRCm39) |
A611V |
possibly damaging |
Het |
Ets2 |
T |
C |
16: 95,516,118 (GRCm39) |
S233P |
probably benign |
Het |
Fchsd2 |
G |
A |
7: 100,899,645 (GRCm39) |
|
probably benign |
Het |
Fhip2a |
T |
C |
19: 57,374,737 (GRCm39) |
I704T |
possibly damaging |
Het |
Fkbp4 |
T |
C |
6: 128,409,453 (GRCm39) |
R402G |
probably benign |
Het |
G2e3 |
T |
A |
12: 51,400,412 (GRCm39) |
D21E |
probably benign |
Het |
Gask1a |
A |
G |
9: 121,794,493 (GRCm39) |
T216A |
possibly damaging |
Het |
Gck |
A |
T |
11: 5,852,165 (GRCm39) |
N391K |
probably damaging |
Het |
Gm11077 |
T |
A |
6: 140,675,017 (GRCm39) |
I3N |
unknown |
Het |
Gm6793 |
T |
C |
8: 112,741,088 (GRCm39) |
M185V |
probably benign |
Het |
Gucy2d |
T |
A |
7: 98,103,268 (GRCm39) |
L504H |
probably damaging |
Het |
Hat1 |
T |
A |
2: 71,251,627 (GRCm39) |
Y225* |
probably null |
Het |
Iars2 |
A |
T |
1: 185,050,765 (GRCm39) |
D441E |
probably benign |
Het |
Ido2 |
C |
A |
8: 25,043,776 (GRCm39) |
M92I |
possibly damaging |
Het |
Ifne |
T |
C |
4: 88,797,908 (GRCm39) |
E170G |
probably damaging |
Het |
Ints8 |
C |
A |
4: 11,241,684 (GRCm39) |
C253F |
probably damaging |
Het |
Intu |
G |
T |
3: 40,618,765 (GRCm39) |
G257V |
probably damaging |
Het |
Jakmip3 |
A |
G |
7: 138,609,316 (GRCm39) |
K140R |
probably benign |
Het |
Kcnip3 |
T |
C |
2: 127,301,263 (GRCm39) |
E237G |
probably damaging |
Het |
Ksr2 |
A |
C |
5: 117,643,594 (GRCm39) |
E121A |
probably benign |
Het |
Lars1 |
T |
A |
18: 42,347,902 (GRCm39) |
I974F |
probably benign |
Het |
Lce1b |
A |
G |
3: 92,563,318 (GRCm39) |
S72P |
unknown |
Het |
Lhfpl4 |
T |
A |
6: 113,153,394 (GRCm39) |
D125V |
probably benign |
Het |
Luc7l |
G |
A |
17: 26,499,030 (GRCm39) |
|
probably benign |
Het |
Mei1 |
T |
C |
15: 82,009,154 (GRCm39) |
L833P |
probably damaging |
Het |
Mier2 |
A |
G |
10: 79,384,664 (GRCm39) |
V150A |
probably damaging |
Het |
Muc4 |
C |
T |
16: 32,576,715 (GRCm39) |
R2072C |
unknown |
Het |
Myh3 |
A |
G |
11: 66,975,852 (GRCm39) |
K295E |
probably benign |
Het |
Ndufaf5 |
A |
G |
2: 140,023,509 (GRCm39) |
I115V |
probably benign |
Het |
Neb |
T |
C |
2: 52,216,756 (GRCm39) |
K140E |
probably damaging |
Het |
Niban1 |
A |
G |
1: 151,517,302 (GRCm39) |
S104G |
possibly damaging |
Het |
Npas2 |
A |
G |
1: 39,339,759 (GRCm39) |
D103G |
probably benign |
Het |
Ntrk3 |
A |
T |
7: 77,842,352 (GRCm39) |
H825Q |
possibly damaging |
Het |
Nup62 |
T |
A |
7: 44,478,472 (GRCm39) |
S162R |
possibly damaging |
Het |
Or4c108 |
T |
C |
2: 88,804,128 (GRCm39) |
T36A |
possibly damaging |
Het |
Or5g23 |
T |
A |
2: 85,438,409 (GRCm39) |
I282F |
probably damaging |
Het |
Or5t7 |
G |
A |
2: 86,507,629 (GRCm39) |
T16I |
possibly damaging |
Het |
Or8c8 |
A |
G |
9: 38,164,986 (GRCm39) |
E91G |
probably damaging |
Het |
Orc4 |
A |
G |
2: 48,800,305 (GRCm39) |
M281T |
probably benign |
Het |
Osbpl5 |
C |
A |
7: 143,269,510 (GRCm39) |
R22L |
probably damaging |
Het |
Otos |
A |
G |
1: 92,572,185 (GRCm39) |
F47S |
probably damaging |
Het |
Parp11 |
A |
G |
6: 127,447,740 (GRCm39) |
T25A |
probably damaging |
Het |
Pcdhb9 |
A |
C |
18: 37,535,137 (GRCm39) |
D377A |
probably damaging |
Het |
Pdgfra |
C |
T |
5: 75,331,534 (GRCm39) |
S348L |
probably benign |
Het |
Pdlim5 |
C |
A |
3: 142,012,060 (GRCm39) |
|
probably null |
Het |
Peg12 |
T |
C |
7: 62,113,416 (GRCm39) |
H227R |
probably benign |
Het |
Piezo2 |
T |
C |
18: 63,152,415 (GRCm39) |
E2559G |
probably damaging |
Het |
Pnisr |
C |
T |
4: 21,874,086 (GRCm39) |
|
probably benign |
Het |
Ppa2 |
A |
T |
3: 133,053,858 (GRCm39) |
I183F |
probably damaging |
Het |
Pramel48 |
T |
A |
5: 95,630,758 (GRCm39) |
Y212N |
probably benign |
Het |
Prl2a1 |
T |
C |
13: 27,988,923 (GRCm39) |
L16P |
probably damaging |
Het |
Rai14 |
C |
A |
15: 10,633,314 (GRCm39) |
Q25H |
probably damaging |
Het |
Rbm34 |
C |
A |
8: 127,697,631 (GRCm39) |
A27S |
probably benign |
Het |
Rchy1 |
T |
C |
5: 92,099,762 (GRCm39) |
D192G |
probably damaging |
Het |
Rexo1 |
T |
C |
10: 80,378,754 (GRCm39) |
D1094G |
probably damaging |
Het |
Rtl1 |
T |
A |
12: 109,556,970 (GRCm39) |
D1623V |
probably damaging |
Het |
Ryr2 |
C |
T |
13: 11,746,586 (GRCm39) |
E1989K |
probably benign |
Het |
Sema6c |
A |
G |
3: 95,078,124 (GRCm39) |
E500G |
probably damaging |
Het |
Slc13a1 |
T |
A |
6: 24,117,999 (GRCm39) |
Y246F |
probably damaging |
Het |
Slc39a9 |
C |
T |
12: 80,726,297 (GRCm39) |
L249F |
probably damaging |
Het |
Slc6a21 |
C |
T |
7: 44,937,252 (GRCm39) |
P261S |
probably benign |
Het |
Slco2b1 |
C |
T |
7: 99,335,243 (GRCm39) |
C179Y |
probably damaging |
Het |
Sox6 |
T |
C |
7: 115,258,773 (GRCm39) |
N252S |
possibly damaging |
Het |
Spr-ps1 |
C |
T |
6: 85,132,885 (GRCm39) |
|
noncoding transcript |
Het |
Sptbn1 |
C |
A |
11: 30,064,781 (GRCm39) |
R1906L |
possibly damaging |
Het |
Stac2 |
T |
C |
11: 97,943,771 (GRCm39) |
D13G |
probably benign |
Het |
Stat5a |
G |
T |
11: 100,764,955 (GRCm39) |
R226L |
probably damaging |
Het |
Suz12 |
A |
G |
11: 79,904,425 (GRCm39) |
|
probably null |
Het |
Tas2r144 |
C |
A |
6: 42,192,936 (GRCm39) |
H225Q |
probably benign |
Het |
Tdo2 |
T |
A |
3: 81,867,853 (GRCm39) |
M331L |
probably benign |
Het |
Tesk1 |
T |
C |
4: 43,447,201 (GRCm39) |
W530R |
probably damaging |
Het |
Tlr6 |
T |
C |
5: 65,112,172 (GRCm39) |
N245S |
probably benign |
Het |
Tnfrsf11a |
G |
T |
1: 105,772,431 (GRCm39) |
A573S |
probably damaging |
Het |
Tpbpb |
A |
T |
13: 61,050,344 (GRCm39) |
|
probably benign |
Het |
Trim24 |
T |
A |
6: 37,928,447 (GRCm39) |
S590T |
probably damaging |
Het |
Ttll3 |
G |
T |
6: 113,369,725 (GRCm39) |
A90S |
possibly damaging |
Het |
Ubr5 |
A |
T |
15: 38,042,090 (GRCm39) |
S169T |
probably benign |
Het |
Usp28 |
T |
C |
9: 48,928,007 (GRCm39) |
V363A |
probably damaging |
Het |
Vcan |
A |
G |
13: 89,838,990 (GRCm39) |
S2185P |
probably benign |
Het |
Vmn1r211 |
T |
C |
13: 23,035,779 (GRCm39) |
H296R |
probably benign |
Het |
Vmn2r3 |
G |
A |
3: 64,166,537 (GRCm39) |
P865S |
probably damaging |
Het |
Wapl |
A |
G |
14: 34,414,415 (GRCm39) |
T426A |
probably benign |
Het |
Wdr37 |
G |
T |
13: 8,886,887 (GRCm39) |
T300K |
probably damaging |
Het |
Wrap53 |
A |
T |
11: 69,452,990 (GRCm39) |
V439E |
probably null |
Het |
Wrn |
A |
G |
8: 33,747,249 (GRCm39) |
S868P |
probably benign |
Het |
Zfhx4 |
A |
G |
3: 5,477,774 (GRCm39) |
E3463G |
probably damaging |
Het |
Zfp189 |
T |
A |
4: 49,529,283 (GRCm39) |
C129S |
possibly damaging |
Het |
Zfp442 |
T |
C |
2: 150,250,100 (GRCm39) |
K544E |
probably damaging |
Het |
Zfp939 |
T |
A |
7: 39,122,728 (GRCm39) |
|
noncoding transcript |
Het |
Zfyve26 |
T |
C |
12: 79,308,573 (GRCm39) |
H228R |
possibly damaging |
Het |
|
Other mutations in Rapgef6 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00436:Rapgef6
|
APN |
11 |
54,570,091 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00507:Rapgef6
|
APN |
11 |
54,554,935 (GRCm39) |
nonsense |
probably null |
|
IGL00809:Rapgef6
|
APN |
11 |
54,540,126 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00843:Rapgef6
|
APN |
11 |
54,582,099 (GRCm39) |
missense |
probably benign |
0.03 |
IGL00899:Rapgef6
|
APN |
11 |
54,510,844 (GRCm39) |
nonsense |
probably null |
|
IGL01372:Rapgef6
|
APN |
11 |
54,559,437 (GRCm39) |
splice site |
probably benign |
|
IGL01604:Rapgef6
|
APN |
11 |
54,585,389 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01935:Rapgef6
|
APN |
11 |
54,501,668 (GRCm39) |
missense |
possibly damaging |
0.78 |
IGL01991:Rapgef6
|
APN |
11 |
54,443,695 (GRCm39) |
missense |
probably benign |
0.37 |
IGL02243:Rapgef6
|
APN |
11 |
54,567,226 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02407:Rapgef6
|
APN |
11 |
54,567,181 (GRCm39) |
missense |
possibly damaging |
0.91 |
IGL02676:Rapgef6
|
APN |
11 |
54,540,172 (GRCm39) |
unclassified |
probably benign |
|
IGL02934:Rapgef6
|
APN |
11 |
54,516,690 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03076:Rapgef6
|
APN |
11 |
54,516,793 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03110:Rapgef6
|
APN |
11 |
54,586,915 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL03256:Rapgef6
|
APN |
11 |
54,548,255 (GRCm39) |
missense |
probably damaging |
1.00 |
shocker
|
UTSW |
11 |
54,510,842 (GRCm39) |
missense |
probably damaging |
1.00 |
D4216:Rapgef6
|
UTSW |
11 |
54,559,572 (GRCm39) |
splice site |
probably benign |
|
PIT4305001:Rapgef6
|
UTSW |
11 |
54,570,203 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4366001:Rapgef6
|
UTSW |
11 |
54,582,446 (GRCm39) |
missense |
probably damaging |
0.98 |
R0047:Rapgef6
|
UTSW |
11 |
54,437,204 (GRCm39) |
missense |
possibly damaging |
0.65 |
R0047:Rapgef6
|
UTSW |
11 |
54,437,204 (GRCm39) |
missense |
possibly damaging |
0.65 |
R0125:Rapgef6
|
UTSW |
11 |
54,516,701 (GRCm39) |
nonsense |
probably null |
|
R0189:Rapgef6
|
UTSW |
11 |
54,582,075 (GRCm39) |
missense |
probably benign |
|
R0201:Rapgef6
|
UTSW |
11 |
54,510,767 (GRCm39) |
missense |
probably damaging |
1.00 |
R0505:Rapgef6
|
UTSW |
11 |
54,516,789 (GRCm39) |
missense |
probably benign |
0.00 |
R0524:Rapgef6
|
UTSW |
11 |
54,581,110 (GRCm39) |
missense |
probably benign |
0.32 |
R0853:Rapgef6
|
UTSW |
11 |
54,559,503 (GRCm39) |
missense |
probably damaging |
1.00 |
R1203:Rapgef6
|
UTSW |
11 |
54,582,525 (GRCm39) |
missense |
probably benign |
0.09 |
R1440:Rapgef6
|
UTSW |
11 |
54,517,534 (GRCm39) |
missense |
probably damaging |
1.00 |
R1453:Rapgef6
|
UTSW |
11 |
54,530,553 (GRCm39) |
splice site |
probably null |
|
R1530:Rapgef6
|
UTSW |
11 |
54,552,009 (GRCm39) |
missense |
probably damaging |
1.00 |
R1593:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1620:Rapgef6
|
UTSW |
11 |
54,517,420 (GRCm39) |
missense |
possibly damaging |
0.88 |
R1628:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1629:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1630:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1634:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1640:Rapgef6
|
UTSW |
11 |
54,548,231 (GRCm39) |
missense |
probably damaging |
1.00 |
R1686:Rapgef6
|
UTSW |
11 |
54,582,458 (GRCm39) |
missense |
possibly damaging |
0.81 |
R1722:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1743:Rapgef6
|
UTSW |
11 |
54,567,110 (GRCm39) |
missense |
probably damaging |
1.00 |
R1816:Rapgef6
|
UTSW |
11 |
54,585,314 (GRCm39) |
missense |
probably benign |
|
R1851:Rapgef6
|
UTSW |
11 |
54,533,637 (GRCm39) |
missense |
probably benign |
0.01 |
R1852:Rapgef6
|
UTSW |
11 |
54,533,637 (GRCm39) |
missense |
probably benign |
0.01 |
R1888:Rapgef6
|
UTSW |
11 |
54,551,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R1888:Rapgef6
|
UTSW |
11 |
54,551,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R1942:Rapgef6
|
UTSW |
11 |
54,548,089 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1943:Rapgef6
|
UTSW |
11 |
54,548,089 (GRCm39) |
missense |
possibly damaging |
0.95 |
R2031:Rapgef6
|
UTSW |
11 |
54,443,684 (GRCm39) |
missense |
probably benign |
0.30 |
R2087:Rapgef6
|
UTSW |
11 |
54,522,075 (GRCm39) |
missense |
probably damaging |
1.00 |
R2106:Rapgef6
|
UTSW |
11 |
54,559,512 (GRCm39) |
missense |
probably benign |
0.17 |
R2362:Rapgef6
|
UTSW |
11 |
54,585,098 (GRCm39) |
missense |
probably damaging |
1.00 |
R2484:Rapgef6
|
UTSW |
11 |
54,533,582 (GRCm39) |
missense |
possibly damaging |
0.48 |
R2566:Rapgef6
|
UTSW |
11 |
54,578,537 (GRCm39) |
missense |
possibly damaging |
0.66 |
R2872:Rapgef6
|
UTSW |
11 |
54,552,001 (GRCm39) |
missense |
probably damaging |
1.00 |
R2872:Rapgef6
|
UTSW |
11 |
54,552,001 (GRCm39) |
missense |
probably damaging |
1.00 |
R3744:Rapgef6
|
UTSW |
11 |
54,516,760 (GRCm39) |
missense |
probably benign |
0.40 |
R3848:Rapgef6
|
UTSW |
11 |
54,582,134 (GRCm39) |
missense |
probably damaging |
0.97 |
R4823:Rapgef6
|
UTSW |
11 |
54,585,326 (GRCm39) |
missense |
probably benign |
0.08 |
R4859:Rapgef6
|
UTSW |
11 |
54,526,989 (GRCm39) |
missense |
probably benign |
|
R4906:Rapgef6
|
UTSW |
11 |
54,443,662 (GRCm39) |
missense |
probably damaging |
1.00 |
R4911:Rapgef6
|
UTSW |
11 |
54,513,143 (GRCm39) |
missense |
probably damaging |
0.97 |
R4937:Rapgef6
|
UTSW |
11 |
54,548,143 (GRCm39) |
missense |
probably damaging |
1.00 |
R5033:Rapgef6
|
UTSW |
11 |
54,582,207 (GRCm39) |
missense |
possibly damaging |
0.92 |
R5249:Rapgef6
|
UTSW |
11 |
54,413,943 (GRCm39) |
missense |
probably benign |
0.19 |
R5304:Rapgef6
|
UTSW |
11 |
54,548,200 (GRCm39) |
missense |
probably benign |
0.01 |
R5656:Rapgef6
|
UTSW |
11 |
54,526,962 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5701:Rapgef6
|
UTSW |
11 |
54,567,220 (GRCm39) |
missense |
possibly damaging |
0.76 |
R5758:Rapgef6
|
UTSW |
11 |
54,559,470 (GRCm39) |
missense |
probably damaging |
1.00 |
R5973:Rapgef6
|
UTSW |
11 |
54,530,609 (GRCm39) |
missense |
probably damaging |
1.00 |
R6177:Rapgef6
|
UTSW |
11 |
54,510,842 (GRCm39) |
missense |
probably damaging |
1.00 |
R6268:Rapgef6
|
UTSW |
11 |
54,540,073 (GRCm39) |
missense |
probably damaging |
1.00 |
R6287:Rapgef6
|
UTSW |
11 |
54,517,164 (GRCm39) |
splice site |
probably null |
|
R6293:Rapgef6
|
UTSW |
11 |
54,525,607 (GRCm39) |
missense |
probably damaging |
1.00 |
R6471:Rapgef6
|
UTSW |
11 |
54,582,563 (GRCm39) |
missense |
probably damaging |
0.99 |
R6863:Rapgef6
|
UTSW |
11 |
54,437,206 (GRCm39) |
missense |
probably benign |
0.00 |
R6950:Rapgef6
|
UTSW |
11 |
54,567,206 (GRCm39) |
missense |
probably benign |
0.09 |
R7144:Rapgef6
|
UTSW |
11 |
54,548,191 (GRCm39) |
missense |
possibly damaging |
0.78 |
R7171:Rapgef6
|
UTSW |
11 |
54,567,189 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7199:Rapgef6
|
UTSW |
11 |
54,437,252 (GRCm39) |
missense |
probably benign |
0.00 |
R7291:Rapgef6
|
UTSW |
11 |
54,582,065 (GRCm39) |
missense |
probably benign |
0.05 |
R7436:Rapgef6
|
UTSW |
11 |
54,501,747 (GRCm39) |
critical splice donor site |
probably null |
|
R7498:Rapgef6
|
UTSW |
11 |
54,510,830 (GRCm39) |
missense |
probably damaging |
1.00 |
R7506:Rapgef6
|
UTSW |
11 |
54,526,997 (GRCm39) |
missense |
probably benign |
0.00 |
R7527:Rapgef6
|
UTSW |
11 |
54,525,787 (GRCm39) |
missense |
unknown |
|
R7646:Rapgef6
|
UTSW |
11 |
54,516,780 (GRCm39) |
missense |
probably benign |
0.00 |
R7655:Rapgef6
|
UTSW |
11 |
54,585,279 (GRCm39) |
missense |
probably benign |
0.10 |
R7656:Rapgef6
|
UTSW |
11 |
54,585,279 (GRCm39) |
missense |
probably benign |
0.10 |
R7687:Rapgef6
|
UTSW |
11 |
54,551,901 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7768:Rapgef6
|
UTSW |
11 |
54,517,414 (GRCm39) |
missense |
probably damaging |
1.00 |
R7788:Rapgef6
|
UTSW |
11 |
54,585,225 (GRCm39) |
missense |
probably damaging |
1.00 |
R7890:Rapgef6
|
UTSW |
11 |
54,517,549 (GRCm39) |
missense |
probably damaging |
1.00 |
R8113:Rapgef6
|
UTSW |
11 |
54,516,784 (GRCm39) |
missense |
probably benign |
0.03 |
R8337:Rapgef6
|
UTSW |
11 |
54,522,127 (GRCm39) |
nonsense |
probably null |
|
R8393:Rapgef6
|
UTSW |
11 |
54,578,487 (GRCm39) |
missense |
probably benign |
|
R8465:Rapgef6
|
UTSW |
11 |
54,582,308 (GRCm39) |
missense |
probably benign |
0.00 |
R8492:Rapgef6
|
UTSW |
11 |
54,581,063 (GRCm39) |
missense |
probably damaging |
0.99 |
R8791:Rapgef6
|
UTSW |
11 |
54,459,295 (GRCm39) |
missense |
probably benign |
0.15 |
R8866:Rapgef6
|
UTSW |
11 |
54,443,700 (GRCm39) |
critical splice donor site |
probably null |
|
R8917:Rapgef6
|
UTSW |
11 |
54,582,392 (GRCm39) |
nonsense |
probably null |
|
R8921:Rapgef6
|
UTSW |
11 |
54,570,065 (GRCm39) |
missense |
probably benign |
0.09 |
R9031:Rapgef6
|
UTSW |
11 |
54,578,667 (GRCm39) |
missense |
probably benign |
0.00 |
R9093:Rapgef6
|
UTSW |
11 |
54,487,912 (GRCm39) |
nonsense |
probably null |
|
R9354:Rapgef6
|
UTSW |
11 |
54,510,749 (GRCm39) |
missense |
possibly damaging |
0.66 |
R9514:Rapgef6
|
UTSW |
11 |
54,443,684 (GRCm39) |
missense |
probably benign |
0.14 |
R9516:Rapgef6
|
UTSW |
11 |
54,582,169 (GRCm39) |
missense |
probably damaging |
1.00 |
R9739:Rapgef6
|
UTSW |
11 |
54,513,189 (GRCm39) |
missense |
probably benign |
0.03 |
R9789:Rapgef6
|
UTSW |
11 |
54,540,097 (GRCm39) |
missense |
probably benign |
0.03 |
|
Predicted Primers |
PCR Primer
(F):5'- AGGCCACTATGACTGGTTTGC -3'
(R):5'- GCCAGTGTCTTTAGCAACAGTAG -3'
Sequencing Primer
(F):5'- GGCCACTATGACTGGTTTGCATTAC -3'
(R):5'- CTTTAGCAACAGTAGTCATAGTTGC -3'
|
Posted On |
2014-06-30 |