Incidental Mutation 'R1882:Dusp13b'
ID |
209199 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Dusp13b
|
Ensembl Gene |
ENSMUSG00000021768 |
Gene Name |
dual specificity phosphatase 13B |
Synonyms |
TS-DSP6, TMDP, Dusp13, LMW-DSP6, LOC382853 |
MMRRC Submission |
039903-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R1882 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
14 |
Chromosomal Location |
21783463-21792947 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 21785043 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Aspartic acid to Glutamic Acid
at position 223
(D223E)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000112552
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000075040]
[ENSMUST00000119866]
[ENSMUST00000120956]
[ENSMUST00000120984]
[ENSMUST00000127851]
[ENSMUST00000183698]
[ENSMUST00000184703]
[ENSMUST00000183943]
[ENSMUST00000183893]
[ENSMUST00000184571]
|
AlphaFold |
Q9QYJ7 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000075040
|
SMART Domains |
Protein: ENSMUSP00000074553 Gene: ENSMUSG00000021768
Domain | Start | End | E-Value | Type |
DSPc
|
37 |
181 |
7.66e-32 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000119866
AA Change: D223E
PolyPhen 2
Score 0.043 (Sensitivity: 0.94; Specificity: 0.83)
|
SMART Domains |
Protein: ENSMUSP00000112552 Gene: ENSMUSG00000021768 AA Change: D223E
Domain | Start | End | E-Value | Type |
DSPc
|
45 |
190 |
9.29e-31 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000120956
AA Change: D170E
PolyPhen 2
Score 0.036 (Sensitivity: 0.94; Specificity: 0.82)
|
SMART Domains |
Protein: ENSMUSP00000113305 Gene: ENSMUSG00000021768 AA Change: D170E
Domain | Start | End | E-Value | Type |
DSPc
|
110 |
255 |
9.29e-31 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000120984
AA Change: D105E
PolyPhen 2
Score 0.018 (Sensitivity: 0.95; Specificity: 0.80)
|
SMART Domains |
Protein: ENSMUSP00000113985 Gene: ENSMUSG00000021768 AA Change: D105E
Domain | Start | End | E-Value | Type |
DSPc
|
45 |
190 |
9.29e-31 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000127851
|
SMART Domains |
Protein: ENSMUSP00000120977 Gene: ENSMUSG00000021768
Domain | Start | End | E-Value | Type |
SCOP:d1vhra_
|
20 |
133 |
9e-10 |
SMART |
Blast:DSPc
|
37 |
129 |
5e-60 |
BLAST |
PDB:2E0T|A
|
39 |
129 |
1e-26 |
PDB |
low complexity region
|
162 |
173 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000183698
AA Change: D128E
PolyPhen 2
Score 0.036 (Sensitivity: 0.94; Specificity: 0.82)
|
SMART Domains |
Protein: ENSMUSP00000139058 Gene: ENSMUSG00000021768 AA Change: D128E
Domain | Start | End | E-Value | Type |
DSPc
|
68 |
213 |
9.29e-31 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000184703
AA Change: D105E
PolyPhen 2
Score 0.018 (Sensitivity: 0.95; Specificity: 0.80)
|
SMART Domains |
Protein: ENSMUSP00000138972 Gene: ENSMUSG00000021768 AA Change: D105E
Domain | Start | End | E-Value | Type |
DSPc
|
45 |
190 |
9.29e-31 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000183943
AA Change: D155E
PolyPhen 2
Score 0.036 (Sensitivity: 0.94; Specificity: 0.82)
|
SMART Domains |
Protein: ENSMUSP00000139154 Gene: ENSMUSG00000021768 AA Change: D155E
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
19 |
71 |
6.78e-8 |
PROSPERO |
DSPc
|
95 |
240 |
9.29e-31 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000183893
|
SMART Domains |
Protein: ENSMUSP00000139061 Gene: ENSMUSG00000021768
Domain | Start | End | E-Value | Type |
low complexity region
|
50 |
67 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000184571
|
Meta Mutation Damage Score |
0.0898 |
Coding Region Coverage |
- 1x: 97.4%
- 3x: 96.9%
- 10x: 95.6%
- 20x: 93.5%
|
Validation Efficiency |
100% (59/59) |
MGI Phenotype |
FUNCTION: Members of the protein-tyrosine phosphatase superfamily cooperate with protein kinases to regulate cell proliferation and differentiation. This superfamily is separated into two families based on the substrate that is dephosphorylated. One family, the dual specificity phosphatases (DSPs) acts on both phosphotyrosine and phosphoserine/threonine residues. This gene encodes different but related DSP proteins through the use of non-overlapping open reading frames, alternate splicing, and presumed different transcription promoters. Expression of the distinct proteins from this gene has been found to be tissue specific and the proteins may be involved in postnatal development of specific tissues. A protein encoded by the upstream ORF was found in skeletal muscle, whereas the encoded protein from the downstream ORF was found only in testis. In humans, a similar pattern of expression was found. Multiple alternatively spliced transcript variants were described, but the full-length sequence of only some were determined. [provided by RefSeq, Jul 2008]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 51 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abcc2 |
T |
C |
19: 43,786,945 (GRCm39) |
S189P |
probably benign |
Het |
Adgrg3 |
G |
T |
8: 95,766,943 (GRCm39) |
V433F |
probably benign |
Het |
Arhgap33 |
A |
T |
7: 30,222,234 (GRCm39) |
W1233R |
probably damaging |
Het |
Brf2 |
T |
C |
8: 27,618,577 (GRCm39) |
D9G |
probably damaging |
Het |
Btrc |
G |
A |
19: 45,515,839 (GRCm39) |
R562Q |
probably damaging |
Het |
Cenpu |
T |
C |
8: 47,009,225 (GRCm39) |
F67L |
probably damaging |
Het |
Chia1 |
T |
C |
3: 106,035,790 (GRCm39) |
M150T |
probably damaging |
Het |
Cntln |
A |
G |
4: 85,019,072 (GRCm39) |
E1254G |
probably damaging |
Het |
Creld1 |
G |
A |
6: 113,469,166 (GRCm39) |
C332Y |
probably damaging |
Het |
Ctla2a |
A |
G |
13: 61,083,355 (GRCm39) |
|
probably benign |
Het |
Ext1 |
C |
A |
15: 52,939,188 (GRCm39) |
L620F |
probably damaging |
Het |
H2-DMb2 |
C |
T |
17: 34,366,834 (GRCm39) |
R89C |
probably damaging |
Het |
Klhl32 |
A |
T |
4: 24,743,916 (GRCm39) |
L17* |
probably null |
Het |
Lats2 |
C |
T |
14: 57,934,811 (GRCm39) |
V640M |
probably damaging |
Het |
Lrig3 |
G |
A |
10: 125,845,694 (GRCm39) |
V708I |
possibly damaging |
Het |
Mtcl1 |
T |
C |
17: 66,686,315 (GRCm39) |
T415A |
probably benign |
Het |
Mynn |
A |
G |
3: 30,670,962 (GRCm39) |
*611W |
probably null |
Het |
Nfx1 |
A |
G |
4: 41,009,240 (GRCm39) |
T793A |
possibly damaging |
Het |
Nlrp4d |
T |
C |
7: 10,116,604 (GRCm39) |
|
noncoding transcript |
Het |
Nos3 |
T |
C |
5: 24,573,818 (GRCm39) |
V194A |
probably damaging |
Het |
Npc1l1 |
C |
T |
11: 6,167,473 (GRCm39) |
|
probably null |
Het |
Nrg2 |
T |
C |
18: 36,154,150 (GRCm39) |
D589G |
probably damaging |
Het |
Omg |
C |
T |
11: 79,392,545 (GRCm39) |
|
probably benign |
Het |
Or10v9 |
T |
C |
19: 11,832,835 (GRCm39) |
T161A |
probably damaging |
Het |
Or14j5 |
T |
C |
17: 38,161,839 (GRCm39) |
S119P |
probably damaging |
Het |
Or2y17 |
A |
G |
11: 49,231,539 (GRCm39) |
Y60C |
probably damaging |
Het |
Or8k16 |
T |
A |
2: 85,519,950 (GRCm39) |
M59K |
probably damaging |
Het |
P2ry2 |
G |
T |
7: 100,648,058 (GRCm39) |
Y82* |
probably null |
Het |
Pcdh1 |
T |
C |
18: 38,335,895 (GRCm39) |
T247A |
possibly damaging |
Het |
Pecr |
A |
T |
1: 72,314,136 (GRCm39) |
|
probably null |
Het |
Pgm3 |
A |
G |
9: 86,447,743 (GRCm39) |
Y167H |
possibly damaging |
Het |
Pramel15 |
A |
T |
4: 144,103,485 (GRCm39) |
C214S |
probably benign |
Het |
Prmt2 |
T |
C |
10: 76,058,302 (GRCm39) |
H169R |
probably benign |
Het |
Rad51ap2 |
T |
A |
12: 11,506,251 (GRCm39) |
S58T |
possibly damaging |
Het |
Rbpms2 |
ACTGCTGCTGCTGCTGC |
ACTGCTGCTGCTGCTGCTGC |
9: 65,558,948 (GRCm39) |
|
probably benign |
Het |
Slc6a15 |
T |
C |
10: 103,230,925 (GRCm39) |
S217P |
probably benign |
Het |
Slco1a8 |
C |
A |
6: 141,939,363 (GRCm39) |
|
probably null |
Het |
Snx27 |
G |
A |
3: 94,426,416 (GRCm39) |
T361I |
probably damaging |
Het |
St7l |
A |
G |
3: 104,775,363 (GRCm39) |
T80A |
probably damaging |
Het |
Stk32b |
T |
A |
5: 37,689,031 (GRCm39) |
M98L |
possibly damaging |
Het |
Tonsl |
C |
A |
15: 76,508,350 (GRCm39) |
A6S |
possibly damaging |
Het |
Tpx2 |
A |
G |
2: 152,711,611 (GRCm39) |
R49G |
probably benign |
Het |
Trmt2a |
A |
G |
16: 18,067,758 (GRCm39) |
K144E |
possibly damaging |
Het |
Trpm7 |
A |
C |
2: 126,654,697 (GRCm39) |
L1414V |
probably benign |
Het |
Ugdh |
T |
C |
5: 65,580,939 (GRCm39) |
K107E |
possibly damaging |
Het |
Vamp3 |
A |
T |
4: 151,135,366 (GRCm39) |
|
probably benign |
Het |
Vmn1r172 |
T |
C |
7: 23,359,651 (GRCm39) |
S179P |
probably damaging |
Het |
Vmn1r28 |
A |
G |
6: 58,242,963 (GRCm39) |
M269V |
probably benign |
Het |
Vmn2r94 |
T |
C |
17: 18,464,476 (GRCm39) |
T605A |
probably benign |
Het |
Vwce |
A |
G |
19: 10,615,520 (GRCm39) |
T134A |
possibly damaging |
Het |
Zfp277 |
T |
C |
12: 40,495,745 (GRCm39) |
E5G |
probably benign |
Het |
|
Other mutations in Dusp13b |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01803:Dusp13b
|
APN |
14 |
21,783,907 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02963:Dusp13b
|
APN |
14 |
21,783,875 (GRCm39) |
missense |
possibly damaging |
0.86 |
R0827:Dusp13b
|
UTSW |
14 |
21,792,839 (GRCm39) |
missense |
probably benign |
|
R1185:Dusp13b
|
UTSW |
14 |
21,785,086 (GRCm39) |
missense |
probably damaging |
1.00 |
R1185:Dusp13b
|
UTSW |
14 |
21,785,086 (GRCm39) |
missense |
probably damaging |
1.00 |
R1185:Dusp13b
|
UTSW |
14 |
21,785,086 (GRCm39) |
missense |
probably damaging |
1.00 |
R2915:Dusp13b
|
UTSW |
14 |
21,790,205 (GRCm39) |
missense |
probably damaging |
1.00 |
R3954:Dusp13b
|
UTSW |
14 |
21,790,175 (GRCm39) |
missense |
probably damaging |
1.00 |
R4623:Dusp13b
|
UTSW |
14 |
21,793,546 (GRCm39) |
unclassified |
probably benign |
|
R4837:Dusp13b
|
UTSW |
14 |
21,793,593 (GRCm39) |
utr 3 prime |
probably benign |
|
R6713:Dusp13b
|
UTSW |
14 |
21,798,541 (GRCm39) |
missense |
probably damaging |
1.00 |
R7294:Dusp13b
|
UTSW |
14 |
21,783,782 (GRCm39) |
missense |
possibly damaging |
0.47 |
R7782:Dusp13b
|
UTSW |
14 |
21,791,404 (GRCm39) |
missense |
possibly damaging |
0.86 |
R8088:Dusp13b
|
UTSW |
14 |
21,791,305 (GRCm39) |
missense |
probably benign |
0.33 |
R8176:Dusp13b
|
UTSW |
14 |
21,797,549 (GRCm39) |
missense |
possibly damaging |
0.81 |
R8227:Dusp13b
|
UTSW |
14 |
21,792,869 (GRCm39) |
missense |
probably benign |
|
R8520:Dusp13b
|
UTSW |
14 |
21,793,538 (GRCm39) |
nonsense |
probably null |
|
R8724:Dusp13b
|
UTSW |
14 |
21,796,475 (GRCm39) |
missense |
probably benign |
0.04 |
R8973:Dusp13b
|
UTSW |
14 |
21,784,974 (GRCm39) |
missense |
probably benign |
0.01 |
R9031:Dusp13b
|
UTSW |
14 |
21,790,233 (GRCm39) |
missense |
probably benign |
0.00 |
R9142:Dusp13b
|
UTSW |
14 |
21,792,756 (GRCm39) |
missense |
probably benign |
0.30 |
R9186:Dusp13b
|
UTSW |
14 |
21,798,563 (GRCm39) |
missense |
probably damaging |
0.97 |
R9258:Dusp13b
|
UTSW |
14 |
21,791,155 (GRCm39) |
missense |
probably benign |
0.44 |
R9630:Dusp13b
|
UTSW |
14 |
21,784,974 (GRCm39) |
missense |
probably benign |
0.01 |
|
Predicted Primers |
PCR Primer
(F):5'- TTAAAGTGGGAGGGCCTCTG -3'
(R):5'- CAATGCAGTGAGATCCACCC -3'
Sequencing Primer
(F):5'- CCTCTGATGGAGTTGGTGCC -3'
(R):5'- CACACACACTACCCTAACTTGC -3'
|
Posted On |
2014-06-30 |