Incidental Mutation 'R1903:Tnc'
ID |
209905 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Tnc
|
Ensembl Gene |
ENSMUSG00000028364 |
Gene Name |
tenascin C |
Synonyms |
cytotactin, C130033P17Rik, TN-C, hexabrachion, tenascin-C, Hxb, TN |
MMRRC Submission |
039923-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R1903 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
4 |
Chromosomal Location |
63878022-63965252 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
G to T
at 63918299 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Threonine to Lysine
at position 1204
(T1204K)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000103000
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000030056]
[ENSMUST00000107372]
[ENSMUST00000107377]
|
AlphaFold |
Q80YX1 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000030056
AA Change: T1204K
PolyPhen 2
Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
|
SMART Domains |
Protein: ENSMUSP00000030056 Gene: ENSMUSG00000028364 AA Change: T1204K
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
22 |
N/A |
INTRINSIC |
low complexity region
|
121 |
138 |
N/A |
INTRINSIC |
EGF
|
189 |
217 |
1.87e1 |
SMART |
EGF_like
|
220 |
248 |
3.5e1 |
SMART |
EGF
|
251 |
280 |
4.89e0 |
SMART |
EGF
|
283 |
311 |
3.23e0 |
SMART |
EGF_like
|
314 |
342 |
2.98e1 |
SMART |
EGF
|
345 |
373 |
1.87e1 |
SMART |
EGF
|
376 |
404 |
3.97e0 |
SMART |
EGF
|
407 |
435 |
8.52e0 |
SMART |
EGF
|
438 |
466 |
3.01e0 |
SMART |
EGF
|
469 |
497 |
3.46e0 |
SMART |
EGF
|
500 |
528 |
3.71e0 |
SMART |
EGF
|
531 |
559 |
4.32e-1 |
SMART |
EGF
|
562 |
590 |
1.84e1 |
SMART |
EGF
|
593 |
621 |
3.82e-2 |
SMART |
FN3
|
623 |
701 |
8.9e-8 |
SMART |
FN3
|
712 |
794 |
1.53e-6 |
SMART |
FN3
|
803 |
884 |
7.23e-8 |
SMART |
FN3
|
893 |
974 |
1.71e-9 |
SMART |
FN3
|
985 |
1062 |
2.56e-8 |
SMART |
FN3
|
1074 |
1152 |
8.58e-1 |
SMART |
FN3
|
1165 |
1245 |
2.72e-3 |
SMART |
FN3
|
1256 |
1334 |
5.36e-2 |
SMART |
FN3
|
1347 |
1427 |
4.93e0 |
SMART |
FN3
|
1438 |
1517 |
3.4e-4 |
SMART |
FN3
|
1528 |
1606 |
1.55e-7 |
SMART |
FN3
|
1617 |
1694 |
1.53e-6 |
SMART |
FN3
|
1705 |
1782 |
7.75e-8 |
SMART |
FBG
|
1797 |
2007 |
4.08e-124 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000107372
AA Change: T1204K
PolyPhen 2
Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
|
SMART Domains |
Protein: ENSMUSP00000102995 Gene: ENSMUSG00000028364 AA Change: T1204K
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
22 |
N/A |
INTRINSIC |
low complexity region
|
121 |
138 |
N/A |
INTRINSIC |
EGF
|
189 |
217 |
1.87e1 |
SMART |
EGF_like
|
220 |
248 |
3.5e1 |
SMART |
EGF
|
251 |
280 |
4.89e0 |
SMART |
EGF
|
283 |
311 |
3.23e0 |
SMART |
EGF_like
|
314 |
342 |
2.98e1 |
SMART |
EGF
|
345 |
373 |
1.87e1 |
SMART |
EGF
|
376 |
404 |
3.97e0 |
SMART |
EGF
|
407 |
435 |
8.52e0 |
SMART |
EGF
|
438 |
466 |
3.01e0 |
SMART |
EGF
|
469 |
497 |
3.46e0 |
SMART |
EGF
|
500 |
528 |
3.71e0 |
SMART |
EGF
|
531 |
559 |
4.32e-1 |
SMART |
EGF
|
562 |
590 |
1.84e1 |
SMART |
EGF
|
593 |
621 |
3.82e-2 |
SMART |
FN3
|
623 |
701 |
8.9e-8 |
SMART |
FN3
|
712 |
794 |
1.53e-6 |
SMART |
FN3
|
803 |
884 |
7.23e-8 |
SMART |
FN3
|
893 |
974 |
1.71e-9 |
SMART |
FN3
|
985 |
1062 |
2.56e-8 |
SMART |
FN3
|
1074 |
1152 |
8.58e-1 |
SMART |
FN3
|
1165 |
1245 |
2.72e-3 |
SMART |
FN3
|
1256 |
1334 |
5.36e-2 |
SMART |
FN3
|
1347 |
1427 |
4.93e0 |
SMART |
FN3
|
1438 |
1517 |
2.75e0 |
SMART |
FN3
|
1529 |
1608 |
3.4e-4 |
SMART |
FN3
|
1619 |
1697 |
1.55e-7 |
SMART |
FN3
|
1708 |
1785 |
1.53e-6 |
SMART |
FN3
|
1796 |
1873 |
7.75e-8 |
SMART |
FBG
|
1888 |
2098 |
4.08e-124 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000107377
AA Change: T1204K
PolyPhen 2
Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
|
SMART Domains |
Protein: ENSMUSP00000103000 Gene: ENSMUSG00000028364 AA Change: T1204K
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
22 |
N/A |
INTRINSIC |
low complexity region
|
121 |
138 |
N/A |
INTRINSIC |
EGF
|
189 |
217 |
1.87e1 |
SMART |
EGF_like
|
220 |
248 |
3.5e1 |
SMART |
EGF
|
251 |
280 |
4.89e0 |
SMART |
EGF
|
283 |
311 |
3.23e0 |
SMART |
EGF_like
|
314 |
342 |
2.98e1 |
SMART |
EGF
|
345 |
373 |
1.87e1 |
SMART |
EGF
|
376 |
404 |
3.97e0 |
SMART |
EGF
|
407 |
435 |
8.52e0 |
SMART |
EGF
|
438 |
466 |
3.01e0 |
SMART |
EGF
|
469 |
497 |
3.46e0 |
SMART |
EGF
|
500 |
528 |
3.71e0 |
SMART |
EGF
|
531 |
559 |
4.32e-1 |
SMART |
EGF
|
562 |
590 |
1.84e1 |
SMART |
EGF
|
593 |
621 |
3.82e-2 |
SMART |
FN3
|
623 |
701 |
8.9e-8 |
SMART |
FN3
|
712 |
794 |
1.53e-6 |
SMART |
FN3
|
803 |
884 |
7.23e-8 |
SMART |
FN3
|
893 |
974 |
1.71e-9 |
SMART |
FN3
|
985 |
1062 |
2.56e-8 |
SMART |
FN3
|
1074 |
1152 |
8.58e-1 |
SMART |
FN3
|
1165 |
1245 |
2.72e-3 |
SMART |
FN3
|
1256 |
1334 |
5.36e-2 |
SMART |
FN3
|
1347 |
1427 |
4.93e0 |
SMART |
FN3
|
1438 |
1517 |
3.4e-4 |
SMART |
FN3
|
1528 |
1606 |
1.55e-7 |
SMART |
FN3
|
1617 |
1694 |
1.53e-6 |
SMART |
FN3
|
1705 |
1782 |
7.75e-8 |
SMART |
FBG
|
1797 |
2007 |
4.08e-124 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000135042
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000141428
|
Coding Region Coverage |
- 1x: 97.3%
- 3x: 96.7%
- 10x: 95.0%
- 20x: 91.8%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes an extracellular matrix protein with a spatially and temporally restricted tissue distribution. This protein is homohexameric with disulfide-linked subunits, and contains multiple EGF-like and fibronectin type-III domains. It is implicated in guidance of migrating neurons as well as axons during development, synaptic plasticity, and neuronal regeneration. [provided by RefSeq, Jul 2011] PHENOTYPE: Mice homozygous for several different targeted mutations show variable behavioral and nervous system phenotypes such as abnormal circadian rhythm, anxiety behavior, novelty-induced activity, swimming, impaired synaptic plasticity, long term potentiation and serotonin and dopamine neurotransmission. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 120 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1700017B05Rik |
A |
C |
9: 57,165,635 (GRCm39) |
S246R |
possibly damaging |
Het |
Abca13 |
C |
T |
11: 9,416,411 (GRCm39) |
R4058C |
probably benign |
Het |
Acacb |
A |
T |
5: 114,303,795 (GRCm39) |
R73* |
probably null |
Het |
Adam22 |
C |
T |
5: 8,184,525 (GRCm39) |
C489Y |
probably damaging |
Het |
Agap3 |
A |
T |
5: 24,698,011 (GRCm39) |
K460I |
probably damaging |
Het |
Ak4 |
T |
C |
4: 101,320,833 (GRCm39) |
I214T |
possibly damaging |
Het |
Anpep |
C |
T |
7: 79,488,004 (GRCm39) |
E518K |
probably benign |
Het |
Arrb2 |
T |
A |
11: 70,328,808 (GRCm39) |
H221Q |
probably damaging |
Het |
Atl1 |
T |
G |
12: 70,006,049 (GRCm39) |
F452V |
probably damaging |
Het |
Atp8b5 |
A |
G |
4: 43,357,063 (GRCm39) |
T604A |
probably damaging |
Het |
Bglap3 |
T |
C |
3: 88,276,068 (GRCm39) |
I95V |
probably benign |
Het |
Ccdc88a |
G |
T |
11: 29,411,788 (GRCm39) |
M532I |
probably benign |
Het |
Ccnl1 |
A |
G |
3: 65,854,332 (GRCm39) |
S430P |
possibly damaging |
Het |
Cdhr18 |
C |
T |
14: 13,829,657 (GRCm38) |
S695N |
possibly damaging |
Het |
Cdk5rap2 |
A |
T |
4: 70,321,791 (GRCm39) |
|
probably null |
Het |
Cep126 |
A |
T |
9: 8,120,748 (GRCm39) |
Y92N |
possibly damaging |
Het |
Cfap44 |
A |
C |
16: 44,242,737 (GRCm39) |
T714P |
probably benign |
Het |
Cnga1 |
T |
G |
5: 72,774,068 (GRCm39) |
D90A |
possibly damaging |
Het |
Cnot1 |
T |
C |
8: 96,469,749 (GRCm39) |
I1369V |
possibly damaging |
Het |
Coq3 |
T |
C |
4: 21,910,466 (GRCm39) |
S314P |
probably damaging |
Het |
Crhr1 |
A |
G |
11: 104,060,675 (GRCm39) |
R151G |
probably damaging |
Het |
Crybg2 |
A |
G |
4: 133,806,167 (GRCm39) |
I930V |
probably damaging |
Het |
Ctcf |
T |
A |
8: 106,402,620 (GRCm39) |
|
probably null |
Het |
Dct |
T |
C |
14: 118,271,690 (GRCm39) |
N380S |
probably benign |
Het |
Decr2 |
A |
T |
17: 26,306,387 (GRCm39) |
L83Q |
probably damaging |
Het |
Depdc5 |
CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT |
CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT |
5: 33,067,751 (GRCm39) |
|
probably benign |
Het |
Dgkb |
T |
C |
12: 38,216,776 (GRCm39) |
|
probably null |
Het |
Dnah1 |
T |
C |
14: 31,041,716 (GRCm39) |
D85G |
probably damaging |
Het |
Dnah7a |
T |
C |
1: 53,574,637 (GRCm39) |
D1709G |
probably damaging |
Het |
Dnajc13 |
A |
C |
9: 104,106,136 (GRCm39) |
L346R |
probably damaging |
Het |
Dsc1 |
A |
T |
18: 20,229,045 (GRCm39) |
V415D |
probably damaging |
Het |
Duox2 |
T |
A |
2: 122,125,832 (GRCm39) |
I296F |
probably damaging |
Het |
Ece2 |
T |
A |
16: 20,463,922 (GRCm39) |
L890H |
probably damaging |
Het |
Ecsit |
A |
G |
9: 21,987,815 (GRCm39) |
S75P |
possibly damaging |
Het |
Enpp3 |
A |
G |
10: 24,654,687 (GRCm39) |
C664R |
probably damaging |
Het |
Evpl |
G |
T |
11: 116,117,854 (GRCm39) |
D778E |
probably damaging |
Het |
Eya3 |
T |
A |
4: 132,448,663 (GRCm39) |
|
probably null |
Het |
Fam217b |
A |
T |
2: 178,062,374 (GRCm39) |
I113F |
probably benign |
Het |
Galnt6 |
G |
A |
15: 100,613,999 (GRCm39) |
P101S |
possibly damaging |
Het |
Gm379 |
G |
A |
X: 107,707,870 (GRCm39) |
Q210* |
probably null |
Het |
Grk4 |
A |
T |
5: 34,833,531 (GRCm39) |
|
probably null |
Het |
Gtf3c4 |
A |
G |
2: 28,729,968 (GRCm39) |
V91A |
probably benign |
Het |
Hcfc2 |
G |
T |
10: 82,538,392 (GRCm39) |
G143V |
probably damaging |
Het |
Heatr4 |
A |
C |
12: 84,005,221 (GRCm39) |
H710Q |
probably damaging |
Het |
Htr3a |
A |
T |
9: 48,817,681 (GRCm39) |
D97E |
probably damaging |
Het |
Htr4 |
T |
G |
18: 62,561,193 (GRCm39) |
F151L |
probably benign |
Het |
Il22ra1 |
A |
T |
4: 135,478,219 (GRCm39) |
Q430L |
probably damaging |
Het |
Invs |
T |
A |
4: 48,402,824 (GRCm39) |
|
probably null |
Het |
Ip6k1 |
G |
A |
9: 107,918,195 (GRCm39) |
E77K |
possibly damaging |
Het |
Irs1 |
T |
C |
1: 82,267,182 (GRCm39) |
S345G |
probably damaging |
Het |
Kdm4a |
A |
G |
4: 118,017,596 (GRCm39) |
V490A |
probably benign |
Het |
Kif26a |
C |
T |
12: 112,141,974 (GRCm39) |
R743C |
probably damaging |
Het |
Kif28 |
A |
G |
1: 179,530,088 (GRCm39) |
V691A |
possibly damaging |
Het |
Klhl5 |
T |
A |
5: 65,324,330 (GRCm39) |
L696Q |
probably benign |
Het |
Krtap5-1 |
T |
C |
7: 141,850,084 (GRCm39) |
|
probably benign |
Het |
Lama2 |
A |
C |
10: 27,064,395 (GRCm39) |
D1195E |
probably damaging |
Het |
Lamb1 |
T |
G |
12: 31,379,209 (GRCm39) |
L1722R |
probably damaging |
Het |
Lrp11 |
T |
A |
10: 7,499,544 (GRCm39) |
L245Q |
probably damaging |
Het |
Ltbp2 |
T |
C |
12: 84,876,879 (GRCm39) |
E422G |
probably benign |
Het |
Man2b1 |
T |
A |
8: 85,813,451 (GRCm39) |
D214E |
probably damaging |
Het |
Mlxipl |
A |
T |
5: 135,162,422 (GRCm39) |
D628V |
possibly damaging |
Het |
Msantd5f6 |
T |
A |
4: 73,321,675 (GRCm39) |
Y120F |
probably damaging |
Het |
Myo18b |
G |
A |
5: 112,840,624 (GRCm39) |
R2390C |
probably damaging |
Het |
Mypn |
T |
A |
10: 62,959,176 (GRCm39) |
R1048S |
probably benign |
Het |
Napepld |
A |
G |
5: 21,870,270 (GRCm39) |
S383P |
probably damaging |
Het |
Napsa |
A |
G |
7: 44,231,160 (GRCm39) |
T130A |
probably damaging |
Het |
Nbr1 |
T |
C |
11: 101,465,978 (GRCm39) |
I716T |
probably damaging |
Het |
Nexn |
A |
T |
3: 151,953,818 (GRCm39) |
M212K |
probably damaging |
Het |
Nlrp9b |
T |
A |
7: 19,757,182 (GRCm39) |
S140T |
probably benign |
Het |
Nxpe2 |
T |
C |
9: 48,230,906 (GRCm39) |
T488A |
probably benign |
Het |
Or10g3 |
T |
G |
14: 52,610,174 (GRCm39) |
Q112P |
possibly damaging |
Het |
Or10v1 |
A |
T |
19: 11,873,913 (GRCm39) |
Y176F |
probably benign |
Het |
Or5ac25 |
A |
T |
16: 59,182,526 (GRCm39) |
D18E |
probably benign |
Het |
Or7g12 |
A |
T |
9: 18,900,192 (GRCm39) |
K303* |
probably null |
Het |
Or8k20 |
C |
T |
2: 86,106,190 (GRCm39) |
V214I |
probably benign |
Het |
Osbpl5 |
T |
C |
7: 143,256,918 (GRCm39) |
D404G |
possibly damaging |
Het |
Pan2 |
T |
G |
10: 128,144,237 (GRCm39) |
L162R |
probably damaging |
Het |
Parp1 |
G |
T |
1: 180,416,235 (GRCm39) |
V545F |
probably damaging |
Het |
Pcdh18 |
A |
G |
3: 49,709,896 (GRCm39) |
V473A |
probably benign |
Het |
Plb1 |
A |
T |
5: 32,448,582 (GRCm39) |
N350I |
probably damaging |
Het |
Polr1a |
A |
G |
6: 71,944,898 (GRCm39) |
K1318R |
probably benign |
Het |
Ppp1r18 |
C |
T |
17: 36,184,738 (GRCm39) |
P130S |
probably damaging |
Het |
Prss48 |
C |
T |
3: 85,905,614 (GRCm39) |
W86* |
probably null |
Het |
Rab3c |
A |
T |
13: 110,220,744 (GRCm39) |
I137N |
probably damaging |
Het |
Rab3gap2 |
G |
C |
1: 184,954,099 (GRCm39) |
R57P |
probably benign |
Het |
Rad54l2 |
A |
C |
9: 106,570,916 (GRCm39) |
|
probably null |
Het |
Ralgapb |
C |
A |
2: 158,337,483 (GRCm39) |
N1147K |
probably benign |
Het |
Rfx7 |
C |
T |
9: 72,524,093 (GRCm39) |
R428C |
probably damaging |
Het |
Robo1 |
A |
G |
16: 72,757,092 (GRCm39) |
Q351R |
probably null |
Het |
Samd4 |
T |
C |
14: 47,311,585 (GRCm39) |
F81S |
probably damaging |
Het |
Shprh |
T |
A |
10: 11,059,541 (GRCm39) |
Y1097* |
probably null |
Het |
Sik3 |
C |
G |
9: 46,132,387 (GRCm39) |
H1276Q |
probably benign |
Het |
Slc24a4 |
T |
A |
12: 102,097,876 (GRCm39) |
D79E |
probably benign |
Het |
Slc7a13 |
A |
T |
4: 19,839,254 (GRCm39) |
I286F |
probably benign |
Het |
Smarca1 |
G |
A |
X: 46,938,840 (GRCm39) |
Q723* |
probably null |
Het |
Spata31d1b |
T |
C |
13: 59,865,882 (GRCm39) |
L1010P |
probably damaging |
Het |
Sult2a1 |
T |
C |
7: 13,569,900 (GRCm39) |
S111G |
possibly damaging |
Het |
Tecpr2 |
C |
T |
12: 110,914,346 (GRCm39) |
T1219M |
probably damaging |
Het |
Tesk1 |
T |
C |
4: 43,446,998 (GRCm39) |
M462T |
probably benign |
Het |
Thoc2l |
T |
A |
5: 104,666,196 (GRCm39) |
S239R |
probably benign |
Het |
Tmem171 |
C |
A |
13: 98,822,924 (GRCm39) |
G292* |
probably null |
Het |
Tmtc2 |
G |
T |
10: 105,025,969 (GRCm39) |
T833N |
probably benign |
Het |
Tnfaip3 |
T |
C |
10: 18,883,937 (GRCm39) |
K148E |
probably benign |
Het |
Tnrc18 |
G |
A |
5: 142,800,895 (GRCm39) |
S21F |
probably damaging |
Het |
Tns4 |
T |
C |
11: 98,966,401 (GRCm39) |
T425A |
probably damaging |
Het |
Tox |
T |
A |
4: 6,688,948 (GRCm39) |
Y472F |
probably damaging |
Het |
Trak2 |
A |
T |
1: 58,958,014 (GRCm39) |
|
probably null |
Het |
Trim33 |
T |
A |
3: 103,244,760 (GRCm39) |
Y716N |
probably damaging |
Het |
Trrap |
T |
G |
5: 144,752,863 (GRCm39) |
I1813R |
probably damaging |
Het |
Ttc29 |
A |
G |
8: 78,978,361 (GRCm39) |
E137G |
probably benign |
Het |
Ube2j2 |
A |
G |
4: 156,033,483 (GRCm39) |
K19R |
probably benign |
Het |
Ubxn2b |
T |
C |
4: 6,208,889 (GRCm39) |
I206T |
possibly damaging |
Het |
Usp40 |
A |
G |
1: 87,909,778 (GRCm39) |
F559L |
probably benign |
Het |
Utp4 |
T |
A |
8: 107,638,982 (GRCm39) |
|
probably null |
Het |
Vac14 |
A |
G |
8: 111,409,166 (GRCm39) |
N524S |
probably benign |
Het |
Vps13c |
T |
C |
9: 67,801,334 (GRCm39) |
S605P |
probably damaging |
Het |
Vwa5b2 |
G |
T |
16: 20,423,582 (GRCm39) |
S1165I |
possibly damaging |
Het |
Zdhhc19 |
C |
T |
16: 32,317,231 (GRCm39) |
R28* |
probably null |
Het |
Zfp106 |
T |
C |
2: 120,357,329 (GRCm39) |
I1189V |
probably benign |
Het |
Zfp189 |
C |
T |
4: 49,529,511 (GRCm39) |
Q205* |
probably null |
Het |
|
Other mutations in Tnc |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00229:Tnc
|
APN |
4 |
63,935,061 (GRCm39) |
splice site |
probably benign |
|
IGL00531:Tnc
|
APN |
4 |
63,889,390 (GRCm39) |
splice site |
probably benign |
|
IGL00674:Tnc
|
APN |
4 |
63,883,844 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01015:Tnc
|
APN |
4 |
63,935,571 (GRCm39) |
missense |
probably benign |
0.19 |
IGL01090:Tnc
|
APN |
4 |
63,918,317 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01310:Tnc
|
APN |
4 |
63,931,314 (GRCm39) |
missense |
probably benign |
0.03 |
IGL01331:Tnc
|
APN |
4 |
63,901,112 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01393:Tnc
|
APN |
4 |
63,932,291 (GRCm39) |
splice site |
probably benign |
|
IGL01411:Tnc
|
APN |
4 |
63,918,959 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL01472:Tnc
|
APN |
4 |
63,924,656 (GRCm39) |
missense |
probably benign |
0.00 |
IGL01552:Tnc
|
APN |
4 |
63,888,645 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01661:Tnc
|
APN |
4 |
63,888,544 (GRCm39) |
splice site |
probably benign |
|
IGL01669:Tnc
|
APN |
4 |
63,918,938 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01912:Tnc
|
APN |
4 |
63,926,977 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02028:Tnc
|
APN |
4 |
63,884,909 (GRCm39) |
splice site |
probably benign |
|
IGL02100:Tnc
|
APN |
4 |
63,918,398 (GRCm39) |
missense |
possibly damaging |
0.84 |
IGL02549:Tnc
|
APN |
4 |
63,933,309 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02642:Tnc
|
APN |
4 |
63,883,816 (GRCm39) |
splice site |
probably benign |
|
IGL02712:Tnc
|
APN |
4 |
63,893,493 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02876:Tnc
|
APN |
4 |
63,933,338 (GRCm39) |
missense |
possibly damaging |
0.56 |
IGL02886:Tnc
|
APN |
4 |
63,918,344 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL02972:Tnc
|
APN |
4 |
63,894,715 (GRCm39) |
missense |
probably benign |
0.11 |
IGL03073:Tnc
|
APN |
4 |
63,889,461 (GRCm39) |
missense |
possibly damaging |
0.58 |
IGL03116:Tnc
|
APN |
4 |
63,932,270 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03181:Tnc
|
APN |
4 |
63,885,543 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL03358:Tnc
|
APN |
4 |
63,935,852 (GRCm39) |
nonsense |
probably null |
|
tancredo
|
UTSW |
4 |
63,911,534 (GRCm39) |
nonsense |
probably null |
|
BB009:Tnc
|
UTSW |
4 |
63,926,857 (GRCm39) |
missense |
probably benign |
|
BB019:Tnc
|
UTSW |
4 |
63,926,857 (GRCm39) |
missense |
probably benign |
|
P0020:Tnc
|
UTSW |
4 |
63,927,094 (GRCm39) |
missense |
possibly damaging |
0.63 |
PIT4377001:Tnc
|
UTSW |
4 |
63,935,973 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4403001:Tnc
|
UTSW |
4 |
63,882,904 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4468001:Tnc
|
UTSW |
4 |
63,882,904 (GRCm39) |
missense |
probably damaging |
1.00 |
R0243:Tnc
|
UTSW |
4 |
63,888,657 (GRCm39) |
missense |
probably damaging |
0.98 |
R0362:Tnc
|
UTSW |
4 |
63,935,679 (GRCm39) |
missense |
probably damaging |
1.00 |
R0410:Tnc
|
UTSW |
4 |
63,925,931 (GRCm39) |
missense |
probably benign |
0.00 |
R0420:Tnc
|
UTSW |
4 |
63,918,396 (GRCm39) |
missense |
probably benign |
0.00 |
R0540:Tnc
|
UTSW |
4 |
63,938,692 (GRCm39) |
missense |
probably damaging |
1.00 |
R0650:Tnc
|
UTSW |
4 |
63,926,971 (GRCm39) |
missense |
probably benign |
0.00 |
R1019:Tnc
|
UTSW |
4 |
63,880,319 (GRCm39) |
missense |
probably damaging |
1.00 |
R1102:Tnc
|
UTSW |
4 |
63,938,705 (GRCm39) |
missense |
probably benign |
0.05 |
R1126:Tnc
|
UTSW |
4 |
63,936,357 (GRCm39) |
missense |
probably damaging |
0.99 |
R1141:Tnc
|
UTSW |
4 |
63,932,231 (GRCm39) |
missense |
probably damaging |
1.00 |
R1142:Tnc
|
UTSW |
4 |
63,932,231 (GRCm39) |
missense |
probably damaging |
1.00 |
R1307:Tnc
|
UTSW |
4 |
63,927,096 (GRCm39) |
missense |
probably damaging |
0.98 |
R1322:Tnc
|
UTSW |
4 |
63,932,231 (GRCm39) |
missense |
probably damaging |
1.00 |
R1414:Tnc
|
UTSW |
4 |
63,883,932 (GRCm39) |
splice site |
probably benign |
|
R1470:Tnc
|
UTSW |
4 |
63,884,811 (GRCm39) |
missense |
probably damaging |
1.00 |
R1470:Tnc
|
UTSW |
4 |
63,884,811 (GRCm39) |
missense |
probably damaging |
1.00 |
R1499:Tnc
|
UTSW |
4 |
63,882,991 (GRCm39) |
missense |
probably benign |
0.15 |
R1506:Tnc
|
UTSW |
4 |
63,925,921 (GRCm39) |
missense |
possibly damaging |
0.90 |
R1597:Tnc
|
UTSW |
4 |
63,924,621 (GRCm39) |
missense |
probably benign |
|
R1750:Tnc
|
UTSW |
4 |
63,890,972 (GRCm39) |
missense |
probably damaging |
1.00 |
R1765:Tnc
|
UTSW |
4 |
63,932,231 (GRCm39) |
missense |
probably damaging |
1.00 |
R1783:Tnc
|
UTSW |
4 |
63,936,333 (GRCm39) |
missense |
probably damaging |
0.98 |
R1808:Tnc
|
UTSW |
4 |
63,918,168 (GRCm39) |
missense |
probably damaging |
1.00 |
R1932:Tnc
|
UTSW |
4 |
63,911,262 (GRCm39) |
critical splice donor site |
probably null |
|
R1941:Tnc
|
UTSW |
4 |
63,933,201 (GRCm39) |
missense |
probably damaging |
1.00 |
R1983:Tnc
|
UTSW |
4 |
63,902,867 (GRCm39) |
missense |
possibly damaging |
0.95 |
R2024:Tnc
|
UTSW |
4 |
63,882,858 (GRCm39) |
missense |
probably damaging |
1.00 |
R2075:Tnc
|
UTSW |
4 |
63,913,903 (GRCm39) |
missense |
possibly damaging |
0.94 |
R2327:Tnc
|
UTSW |
4 |
63,893,475 (GRCm39) |
missense |
possibly damaging |
0.78 |
R2444:Tnc
|
UTSW |
4 |
63,933,200 (GRCm39) |
missense |
probably damaging |
1.00 |
R2982:Tnc
|
UTSW |
4 |
63,938,756 (GRCm39) |
missense |
possibly damaging |
0.81 |
R3874:Tnc
|
UTSW |
4 |
63,926,947 (GRCm39) |
missense |
probably damaging |
1.00 |
R4110:Tnc
|
UTSW |
4 |
63,933,188 (GRCm39) |
missense |
probably damaging |
1.00 |
R4360:Tnc
|
UTSW |
4 |
63,935,161 (GRCm39) |
missense |
probably benign |
0.35 |
R4371:Tnc
|
UTSW |
4 |
63,888,588 (GRCm39) |
missense |
probably damaging |
1.00 |
R4434:Tnc
|
UTSW |
4 |
63,926,066 (GRCm39) |
missense |
possibly damaging |
0.91 |
R4438:Tnc
|
UTSW |
4 |
63,926,066 (GRCm39) |
missense |
possibly damaging |
0.91 |
R4570:Tnc
|
UTSW |
4 |
63,913,909 (GRCm39) |
missense |
probably damaging |
0.99 |
R4595:Tnc
|
UTSW |
4 |
63,913,982 (GRCm39) |
missense |
probably damaging |
1.00 |
R4749:Tnc
|
UTSW |
4 |
63,913,876 (GRCm39) |
missense |
possibly damaging |
0.56 |
R4756:Tnc
|
UTSW |
4 |
63,885,580 (GRCm39) |
missense |
probably damaging |
0.99 |
R4824:Tnc
|
UTSW |
4 |
63,935,857 (GRCm39) |
nonsense |
probably null |
|
R4957:Tnc
|
UTSW |
4 |
63,894,793 (GRCm39) |
missense |
probably damaging |
1.00 |
R4977:Tnc
|
UTSW |
4 |
63,924,485 (GRCm39) |
missense |
possibly damaging |
0.82 |
R5001:Tnc
|
UTSW |
4 |
63,918,299 (GRCm39) |
missense |
probably benign |
0.16 |
R5001:Tnc
|
UTSW |
4 |
63,902,726 (GRCm39) |
missense |
probably damaging |
1.00 |
R5015:Tnc
|
UTSW |
4 |
63,924,739 (GRCm39) |
missense |
probably damaging |
1.00 |
R5049:Tnc
|
UTSW |
4 |
63,936,223 (GRCm39) |
missense |
probably damaging |
1.00 |
R5066:Tnc
|
UTSW |
4 |
63,893,466 (GRCm39) |
missense |
probably damaging |
0.96 |
R5073:Tnc
|
UTSW |
4 |
63,938,648 (GRCm39) |
missense |
probably damaging |
1.00 |
R5116:Tnc
|
UTSW |
4 |
63,885,452 (GRCm39) |
critical splice donor site |
probably null |
|
R5195:Tnc
|
UTSW |
4 |
63,885,489 (GRCm39) |
missense |
probably damaging |
1.00 |
R5200:Tnc
|
UTSW |
4 |
63,889,515 (GRCm39) |
missense |
probably damaging |
1.00 |
R5221:Tnc
|
UTSW |
4 |
63,911,534 (GRCm39) |
nonsense |
probably null |
|
R5237:Tnc
|
UTSW |
4 |
63,880,333 (GRCm39) |
missense |
probably damaging |
1.00 |
R5265:Tnc
|
UTSW |
4 |
63,911,443 (GRCm39) |
missense |
probably benign |
0.00 |
R5275:Tnc
|
UTSW |
4 |
63,882,967 (GRCm39) |
nonsense |
probably null |
|
R5346:Tnc
|
UTSW |
4 |
63,926,892 (GRCm39) |
missense |
probably benign |
|
R5409:Tnc
|
UTSW |
4 |
63,925,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R5409:Tnc
|
UTSW |
4 |
63,884,773 (GRCm39) |
missense |
probably damaging |
1.00 |
R5469:Tnc
|
UTSW |
4 |
63,932,162 (GRCm39) |
splice site |
probably null |
|
R5518:Tnc
|
UTSW |
4 |
63,935,916 (GRCm39) |
missense |
probably damaging |
1.00 |
R5560:Tnc
|
UTSW |
4 |
63,926,946 (GRCm39) |
missense |
probably damaging |
1.00 |
R5588:Tnc
|
UTSW |
4 |
63,924,659 (GRCm39) |
missense |
possibly damaging |
0.57 |
R5686:Tnc
|
UTSW |
4 |
63,925,967 (GRCm39) |
splice site |
probably null |
|
R5686:Tnc
|
UTSW |
4 |
63,927,032 (GRCm39) |
missense |
possibly damaging |
0.78 |
R5837:Tnc
|
UTSW |
4 |
63,931,451 (GRCm39) |
missense |
probably damaging |
1.00 |
R5976:Tnc
|
UTSW |
4 |
63,936,403 (GRCm39) |
missense |
probably benign |
0.17 |
R6156:Tnc
|
UTSW |
4 |
63,888,589 (GRCm39) |
missense |
probably damaging |
1.00 |
R6182:Tnc
|
UTSW |
4 |
63,927,033 (GRCm39) |
missense |
probably damaging |
0.99 |
R6360:Tnc
|
UTSW |
4 |
63,918,970 (GRCm39) |
missense |
probably damaging |
1.00 |
R6416:Tnc
|
UTSW |
4 |
63,926,053 (GRCm39) |
missense |
probably benign |
0.05 |
R6778:Tnc
|
UTSW |
4 |
63,913,835 (GRCm39) |
missense |
probably benign |
0.12 |
R6798:Tnc
|
UTSW |
4 |
63,883,841 (GRCm39) |
missense |
probably benign |
0.02 |
R6799:Tnc
|
UTSW |
4 |
63,883,841 (GRCm39) |
missense |
probably benign |
0.02 |
R6943:Tnc
|
UTSW |
4 |
63,900,982 (GRCm39) |
missense |
probably damaging |
0.97 |
R7027:Tnc
|
UTSW |
4 |
63,902,826 (GRCm39) |
missense |
probably benign |
0.02 |
R7183:Tnc
|
UTSW |
4 |
63,931,365 (GRCm39) |
missense |
probably damaging |
1.00 |
R7204:Tnc
|
UTSW |
4 |
63,889,392 (GRCm39) |
splice site |
probably null |
|
R7317:Tnc
|
UTSW |
4 |
63,890,959 (GRCm39) |
missense |
probably damaging |
0.99 |
R7323:Tnc
|
UTSW |
4 |
63,889,469 (GRCm39) |
missense |
probably damaging |
0.96 |
R7327:Tnc
|
UTSW |
4 |
63,882,999 (GRCm39) |
splice site |
probably null |
|
R7382:Tnc
|
UTSW |
4 |
63,932,280 (GRCm39) |
nonsense |
probably null |
|
R7399:Tnc
|
UTSW |
4 |
63,938,894 (GRCm39) |
start gained |
probably benign |
|
R7479:Tnc
|
UTSW |
4 |
63,935,865 (GRCm39) |
missense |
possibly damaging |
0.95 |
R7585:Tnc
|
UTSW |
4 |
63,938,648 (GRCm39) |
missense |
probably damaging |
1.00 |
R7932:Tnc
|
UTSW |
4 |
63,926,857 (GRCm39) |
missense |
probably benign |
|
R7947:Tnc
|
UTSW |
4 |
63,935,580 (GRCm39) |
missense |
probably damaging |
1.00 |
R7974:Tnc
|
UTSW |
4 |
63,918,961 (GRCm39) |
missense |
possibly damaging |
0.84 |
R7991:Tnc
|
UTSW |
4 |
63,926,983 (GRCm39) |
missense |
probably benign |
0.42 |
R8004:Tnc
|
UTSW |
4 |
63,902,894 (GRCm39) |
missense |
probably benign |
0.04 |
R8080:Tnc
|
UTSW |
4 |
63,894,706 (GRCm39) |
missense |
possibly damaging |
0.52 |
R8109:Tnc
|
UTSW |
4 |
63,927,000 (GRCm39) |
missense |
probably benign |
0.11 |
R8145:Tnc
|
UTSW |
4 |
63,935,716 (GRCm39) |
missense |
probably benign |
|
R8340:Tnc
|
UTSW |
4 |
63,926,036 (GRCm39) |
missense |
probably damaging |
1.00 |
R8360:Tnc
|
UTSW |
4 |
63,885,511 (GRCm39) |
missense |
probably benign |
0.00 |
R8671:Tnc
|
UTSW |
4 |
63,935,683 (GRCm39) |
missense |
probably damaging |
1.00 |
R8691:Tnc
|
UTSW |
4 |
63,880,313 (GRCm39) |
missense |
probably damaging |
1.00 |
R8759:Tnc
|
UTSW |
4 |
63,924,501 (GRCm39) |
missense |
possibly damaging |
0.86 |
R8864:Tnc
|
UTSW |
4 |
63,911,296 (GRCm39) |
missense |
probably damaging |
0.98 |
R8927:Tnc
|
UTSW |
4 |
63,925,595 (GRCm39) |
missense |
probably damaging |
1.00 |
R8928:Tnc
|
UTSW |
4 |
63,925,595 (GRCm39) |
missense |
probably damaging |
1.00 |
R8949:Tnc
|
UTSW |
4 |
63,927,087 (GRCm39) |
missense |
probably damaging |
1.00 |
R8956:Tnc
|
UTSW |
4 |
63,918,970 (GRCm39) |
missense |
probably damaging |
1.00 |
R9016:Tnc
|
UTSW |
4 |
63,935,331 (GRCm39) |
missense |
probably benign |
0.23 |
R9049:Tnc
|
UTSW |
4 |
63,918,247 (GRCm39) |
missense |
possibly damaging |
0.83 |
R9097:Tnc
|
UTSW |
4 |
63,888,622 (GRCm39) |
missense |
possibly damaging |
0.62 |
R9114:Tnc
|
UTSW |
4 |
63,890,973 (GRCm39) |
missense |
probably benign |
0.03 |
R9151:Tnc
|
UTSW |
4 |
63,938,686 (GRCm39) |
missense |
possibly damaging |
0.46 |
R9488:Tnc
|
UTSW |
4 |
63,913,942 (GRCm39) |
missense |
probably damaging |
0.99 |
R9537:Tnc
|
UTSW |
4 |
63,884,821 (GRCm39) |
missense |
probably damaging |
0.99 |
R9666:Tnc
|
UTSW |
4 |
63,926,045 (GRCm39) |
missense |
probably damaging |
1.00 |
R9700:Tnc
|
UTSW |
4 |
63,933,186 (GRCm39) |
missense |
probably damaging |
0.99 |
R9703:Tnc
|
UTSW |
4 |
63,889,412 (GRCm39) |
missense |
probably benign |
0.00 |
R9771:Tnc
|
UTSW |
4 |
63,925,600 (GRCm39) |
missense |
probably damaging |
1.00 |
S24628:Tnc
|
UTSW |
4 |
63,936,249 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1177:Tnc
|
UTSW |
4 |
63,925,663 (GRCm39) |
nonsense |
probably null |
|
Z1177:Tnc
|
UTSW |
4 |
63,878,781 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- GAGATGGGATTCCTCTTAAGCAG -3'
(R):5'- CCCTTGGGTTCAGGATTTCC -3'
Sequencing Primer
(F):5'- TCTTAAGCAGAGACAGGGAGAG -3'
(R):5'- TGGGTTCAGGATTTCCTATATCTTAC -3'
|
Posted On |
2014-06-30 |