Mutagenetix > Incidental Mutation

Incidental Mutation 'R1908:Slit2'

210038

Institutional Source

Beutler Lab

Gene Symbol

Slit2

Ensembl Gene

ENSMUSG00000031558

Gene Name

slit guidance ligand 2

Synonyms

Drad-1, Slil3, E130320P19Rik, E030015M03Rik

MMRRC Submission

039927-MU

Accession Numbers

Ncbi RefSeq: NM_178804.3; MGI: 1315205

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R1908 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

47983138-48307733 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 48281988 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 41 (T41A)

Ref Sequence

ENSEMBL: ENSMUSP00000133382 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000033967] [ENSMUST00000170109] [ENSMUST00000173107] [ENSMUST00000173686] [ENSMUST00000174313] [ENSMUST00000174421]

AlphaFold

Q9R1B9

Predicted Effect

probably benign
Transcript: ENSMUST00000033967

SMART Domains

Protein: ENSMUSP00000033967
Gene: ENSMUSG00000031558

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
LRRNT	27	59	6.53e-9	SMART
LRR	53	77	1.41e2	SMART
LRR_TYP	78	101	1.79e-2	SMART
LRR	102	125	2.45e0	SMART
LRR	126	149	9.96e-1	SMART
LRR	154	173	1.29e2	SMART
LRR_TYP	174	197	2.05e-2	SMART
LRRCT	209	258	3.42e-9	SMART
LRRNT	272	304	4.55e-8	SMART
LRR	298	322	3e1	SMART
LRR_TYP	323	346	1.95e-3	SMART
LRR_TYP	347	370	2.24e-3	SMART
LRR	371	394	1.31e0	SMART
LRR	395	418	2.49e-1	SMART
LRRCT	430	479	1.88e-6	SMART
LRRNT	497	529	1.45e-6	SMART
LRR_TYP	549	572	1.38e-3	SMART
LRR	597	620	9.96e-1	SMART
LRR_TYP	621	644	2.71e-2	SMART
LRRCT	656	705	3.56e-7	SMART
LRRNT	718	750	3.69e-8	SMART
LRR	768	791	7.36e0	SMART
LRR_TYP	792	815	5.59e-4	SMART
LRR_TYP	816	839	7.9e-4	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000170109
AA Change: T1126A

PolyPhen 2 Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000127615
Gene: ENSMUSG00000031558
AA Change: T1126A

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
LRRNT	27	59	6.53e-9	SMART
LRR	53	77	1.41e2	SMART
LRR_TYP	78	101	1.79e-2	SMART
LRR	102	125	2.45e0	SMART
LRR	126	149	9.96e-1	SMART
LRR	154	173	1.29e2	SMART
LRR_TYP	174	197	2.05e-2	SMART
LRRCT	209	258	3.42e-9	SMART
LRRNT	272	304	4.55e-8	SMART
LRR	298	322	3e1	SMART
LRR_TYP	323	346	1.95e-3	SMART
LRR_TYP	347	370	2.24e-3	SMART
LRR	371	394	1.31e0	SMART
LRR	395	418	2.49e-1	SMART
LRRCT	430	479	1.88e-6	SMART
LRRNT	497	529	1.45e-6	SMART
LRR_TYP	549	572	1.38e-3	SMART
LRR	597	620	9.96e-1	SMART
LRR_TYP	621	644	2.71e-2	SMART
LRRCT	656	705	3.56e-7	SMART
LRRNT	718	750	3.69e-8	SMART
LRR	768	791	7.36e0	SMART
LRR_TYP	792	815	5.59e-4	SMART
LRR_TYP	816	839	7.9e-4	SMART
LRRCT	851	900	3.9e-13	SMART
EGF	913	947	3.73e-5	SMART
EGF	952	988	4.35e-6	SMART
EGF_CA	990	1026	2.21e-7	SMART
FOLN	993	1015	5.84e1	SMART
EGF	1031	1066	1.07e-5	SMART
EGF_CA	1068	1104	3.97e-9	SMART
FOLN	1116	1138	2.22e0	SMART
EGF	1116	1149	1.62e-5	SMART
LamG	1172	1308	4.82e-39	SMART
EGF	1327	1360	3.68e-4	SMART
EGF	1366	1399	3.88e-3	SMART
FOLN	1407	1429	3.34e0	SMART
EGF	1407	1440	4.46e-3	SMART
CT	1451	1520	4.23e-4	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000172484

Predicted Effect

possibly damaging
Transcript: ENSMUST00000173107
AA Change: T1114A

PolyPhen 2 Score 0.907 (Sensitivity: 0.81; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000133840
Gene: ENSMUSG00000031558
AA Change: T1114A

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
LRRNT	27	59	6.53e-9	SMART
LRR	53	77	1.41e2	SMART
LRR_TYP	78	101	1.79e-2	SMART
LRR	102	125	2.45e0	SMART
LRR	126	149	9.96e-1	SMART
LRR	154	173	1.29e2	SMART
LRR_TYP	174	197	2.05e-2	SMART
LRRCT	209	258	3.42e-9	SMART
LRRNT	272	304	4.55e-8	SMART
LRR	298	322	3e1	SMART
LRR_TYP	323	346	1.95e-3	SMART
LRR_TYP	347	370	2.24e-3	SMART
LRR	371	394	1.31e0	SMART
LRR	395	418	2.49e-1	SMART
LRRCT	430	479	1.88e-6	SMART
LRRNT	505	537	1.45e-6	SMART
LRR_TYP	557	580	1.38e-3	SMART
LRR	605	628	9.96e-1	SMART
LRR_TYP	629	652	2.71e-2	SMART
LRRCT	664	713	3.56e-7	SMART
LRRNT	726	758	3.69e-8	SMART
LRR	776	799	7.36e0	SMART
LRR_TYP	800	823	5.59e-4	SMART
LRR_TYP	824	847	7.9e-4	SMART
LRRCT	859	908	3.9e-13	SMART
EGF	921	955	3.73e-5	SMART
EGF	960	996	4.35e-6	SMART
EGF_CA	998	1034	2.21e-7	SMART
FOLN	1001	1023	5.84e1	SMART
EGF	1039	1074	1.07e-5	SMART
EGF_CA	1076	1112	3.97e-9	SMART
FOLN	1124	1146	2.22e0	SMART
EGF	1124	1157	1.62e-5	SMART
LamG	1180	1316	4.82e-39	SMART
EGF	1335	1368	3.68e-4	SMART
EGF	1374	1407	3.88e-3	SMART
FOLN	1415	1437	3.34e0	SMART
EGF	1415	1448	4.46e-3	SMART
CT	1459	1528	4.23e-4	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000173646

Predicted Effect

probably damaging
Transcript: ENSMUST00000173686
AA Change: T41A

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000133382
Gene: ENSMUSG00000031558
AA Change: T41A

Domain	Start	End	E-Value	Type
EGF	1	31	2.05e-2	SMART
EGF	43	76	1.62e-5	SMART
Pfam:Laminin_G_2	107	149	1.4e-6	PFAM
Pfam:Laminin_G_1	107	150	5e-8	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000174313
AA Change: T1118A

PolyPhen 2 Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000133912
Gene: ENSMUSG00000031558
AA Change: T1118A

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
LRRNT	27	59	6.53e-9	SMART
LRR	53	77	1.41e2	SMART
LRR_TYP	78	101	1.79e-2	SMART
LRR	102	125	2.45e0	SMART
LRR	126	149	9.96e-1	SMART
LRR	154	173	1.29e2	SMART
LRR_TYP	174	197	2.05e-2	SMART
LRRCT	209	258	3.42e-9	SMART
LRRNT	276	308	4.55e-8	SMART
LRR	302	326	3e1	SMART
LRR_TYP	327	350	1.95e-3	SMART
LRR_TYP	351	374	2.24e-3	SMART
LRR	375	398	1.31e0	SMART
LRR	399	422	2.49e-1	SMART
LRRCT	434	483	1.88e-6	SMART
LRRNT	501	533	1.45e-6	SMART
LRR_TYP	553	576	1.38e-3	SMART
LRR	601	624	9.96e-1	SMART
LRR_TYP	625	648	2.71e-2	SMART
LRRCT	660	709	3.56e-7	SMART
LRRNT	722	754	3.69e-8	SMART
LRR	772	795	7.36e0	SMART
LRR_TYP	796	819	5.59e-4	SMART
LRR_TYP	820	843	7.9e-4	SMART
LRRCT	855	904	3.9e-13	SMART
EGF	917	951	3.73e-5	SMART
EGF	956	992	4.35e-6	SMART
EGF_CA	994	1030	2.21e-7	SMART
FOLN	997	1019	5.84e1	SMART
EGF	1035	1070	1.07e-5	SMART
EGF_CA	1072	1108	3.97e-9	SMART
FOLN	1120	1142	2.22e0	SMART
EGF	1120	1153	1.62e-5	SMART
LamG	1176	1312	4.82e-39	SMART
EGF	1331	1364	3.68e-4	SMART
EGF	1370	1403	3.88e-3	SMART
FOLN	1411	1433	3.34e0	SMART
EGF	1411	1444	4.46e-3	SMART
CT	1455	1524	4.23e-4	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000174421
AA Change: T1135A

PolyPhen 2 Score 0.767 (Sensitivity: 0.85; Specificity: 0.92)

SMART Domains

Protein: ENSMUSP00000134263
Gene: ENSMUSG00000031558
AA Change: T1135A

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
LRRNT	27	59	6.53e-9	SMART
LRR	53	77	1.41e2	SMART
LRR_TYP	78	101	1.79e-2	SMART
LRR	102	125	2.45e0	SMART
LRR	126	149	9.96e-1	SMART
LRR	154	173	1.29e2	SMART
LRR_TYP	174	197	2.05e-2	SMART
LRRCT	209	258	3.42e-9	SMART
LRRNT	276	308	4.55e-8	SMART
LRR	302	326	3e1	SMART
LRR_TYP	327	350	1.95e-3	SMART
LRR_TYP	351	374	2.24e-3	SMART
LRR	375	398	1.31e0	SMART
LRR	399	422	2.49e-1	SMART
LRRCT	434	483	1.88e-6	SMART
LRRNT	509	541	1.45e-6	SMART
LRR_TYP	561	584	1.38e-3	SMART
LRR	609	632	9.96e-1	SMART
LRR_TYP	633	656	2.71e-2	SMART
LRRCT	668	717	3.56e-7	SMART
LRRNT	730	762	3.69e-8	SMART
LRR	780	803	7.36e0	SMART
LRR_TYP	804	827	5.59e-4	SMART
LRR_TYP	828	851	7.9e-4	SMART
LRRCT	863	912	3.9e-13	SMART
EGF	925	959	3.73e-5	SMART
EGF	964	1000	4.35e-6	SMART
EGF_CA	1002	1047	4.74e-7	SMART
FOLN	1005	1027	5.84e1	SMART
EGF	1052	1087	1.07e-5	SMART
EGF_CA	1089	1125	3.97e-9	SMART
FOLN	1137	1159	2.22e0	SMART
EGF	1137	1170	1.62e-5	SMART
LamG	1193	1329	4.82e-39	SMART
EGF	1348	1381	3.68e-4	SMART
EGF	1387	1420	3.88e-3	SMART
FOLN	1428	1450	3.34e0	SMART
EGF	1428	1461	4.46e-3	SMART
CT	1472	1541	4.23e-4	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000196063

Coding Region Coverage

1x: 97.3%
3x: 96.8%
10x: 95.4%
20x: 93.0%

Validation Efficiency

MGI Phenotype

Strain: 2179460
FUNCTION: The protein encoded by this gene is a member of the Slit family of secreted glycoproteins, which function as ligands for the Robo family of immunoglobulin receptors. Slit proteins play highly conserved roles in axon guidance and neuronal migration and may also have functions during other cell migration processes including leukocyte migration. In mammals, members of the slit family are characterized by an N-terminal signal peptide, four leucine-rich repeats, nine epidermal growth factor repeats, and a C-terminal cysteine knot. Mice deficient for this gene exhibit abnormal axonal projections in the embryonic forebrain and develop supernumerary uretic buds that maintain improper connections to the nephric duct. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2015]
PHENOTYPE: Homozygous mutants display perinatal lethality, abnormal ureteric bud development, multiple fused kidneys, multiple ureters, and hydroureter. [provided by MGI curators]

Allele List at MGI

All alleles(4) : Targeted(4)

Other mutations in this stock

Total: 83 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700011H14Rik	G	T	14: 49,226,575	D292E	probably damaging	Het
4931406P16Rik	T	A	7: 34,258,036	I59L	probably benign	Het
Abca8b	C	A	11: 109,957,098	L852F	possibly damaging	Het
Abcc6	T	C	7: 46,020,134		probably null	Het
Alg11	T	G	8: 22,065,568	C240G	probably damaging	Het
Aox1	A	G	1: 58,102,624	I1190V	probably damaging	Het
Apc2	T	G	10: 80,314,844	S1911A	probably benign	Het
Arfgef3	T	C	10: 18,652,763	D292G	possibly damaging	Het
Arhgef4	C	A	1: 34,724,259	S865R	probably benign	Het
Ass1	T	A	2: 31,493,148	Y190*	probably null	Het
B4galnt3	A	T	6: 120,210,090		probably null	Het
Btnl10	C	A	11: 58,920,541	P230Q	possibly damaging	Het
C3	A	G	17: 57,209,489	Y1348H	probably damaging	Het
Cebpz	A	T	17: 78,934,907	Y439*	probably null	Het
Cic	C	A	7: 25,286,840	T1229K	probably damaging	Het
Clip4	T	C	17: 71,837,749	S524P	probably damaging	Het
Col6a3	A	C	1: 90,811,699	I269R	probably damaging	Het
Dbh	C	T	2: 27,181,494	T533I	possibly damaging	Het
Dcaf17	A	T	2: 71,060,369	R83*	probably null	Het
Dnah1	A	G	14: 31,262,558	L3923P	probably damaging	Het
Dnah7a	A	T	1: 53,631,562	D510E	probably benign	Het
Dock6	A	G	9: 21,841,629	F296S	probably damaging	Het
Eif4enif1	T	C	11: 3,227,455	S341P	probably damaging	Het
Epb41l1	G	T	2: 156,510,817	G461V	possibly damaging	Het
Epg5	T	A	18: 77,959,032	D555E	probably benign	Het
Fes	T	C	7: 80,386,861	R113G	probably damaging	Het
Gm10684	A	G	9: 45,110,213		probably benign	Het
Gm12185	T	C	11: 48,915,404	E320G	probably benign	Het
Gm14412	G	T	2: 177,315,476	H209N	probably damaging	Het
Gm14412	A	C	2: 177,315,837	S88R	probably benign	Het
Grhl1	T	A	12: 24,608,556	L400Q	probably damaging	Het
Havcr1	T	A	11: 46,773,684	Y216*	probably null	Het
Hephl1	A	C	9: 15,074,124	Y745*	probably null	Het
Hmcn2	T	G	2: 31,411,910		probably null	Het
Hs3st6	A	G	17: 24,758,136	K197E	possibly damaging	Het
Ifi214	C	T	1: 173,529,511	V9I	probably benign	Het
Jakmip2	T	C	18: 43,567,144	T450A	probably benign	Het
Lrp4	T	A	2: 91,498,408	V1551D	possibly damaging	Het
Macf1	A	T	4: 123,457,841	H1634Q	possibly damaging	Het
Mcpt8	T	A	14: 56,083,834	I58F	probably benign	Het
Mga	T	A	2: 119,926,594	H1018Q	possibly damaging	Het
Myo10	T	A	15: 25,801,222	V1499E	probably damaging	Het
Myom2	G	T	8: 15,081,023	D320Y	probably damaging	Het
Olfr1220	G	A	2: 89,097,544	P128S	probably damaging	Het
Olfr1395	A	C	11: 49,148,274	N6H	possibly damaging	Het
Olfr458	C	T	6: 42,460,426	V198M	probably benign	Het
Olfr60	T	C	7: 140,345,465	I175V	probably benign	Het
Olfr74	A	T	2: 87,974,059	V202D	possibly damaging	Het
Olfr740	T	A	14: 50,453,838	M262K	probably damaging	Het
Pabpc4	G	T	4: 123,289,068	R166L	possibly damaging	Het
Pcdhb8	A	G	18: 37,355,962	E231G	possibly damaging	Het
Pomgnt2	A	T	9: 121,982,191	I508N	possibly damaging	Het
Ppp2r5e	C	G	12: 75,469,567	A239P	probably damaging	Het
Prdm15	G	T	16: 97,837,685	D58E	probably benign	Het
Rgl2	A	G	17: 33,932,148	T117A	probably benign	Het
Rp1	A	G	1: 4,348,720	I723T	probably damaging	Het
Serpina3g	A	G	12: 104,241,277	E233G	probably damaging	Het
Skint6	T	A	4: 112,891,990	S798C	probably benign	Het
Slc35f1	T	C	10: 53,021,904	L137P	possibly damaging	Het
Slc6a20a	T	C	9: 123,656,308	N246S	probably damaging	Het
Slc7a2	T	C	8: 40,916,497	L663S	probably benign	Het
Slco1a4	A	G	6: 141,815,447		probably null	Het
Smc2	T	C	4: 52,450,863	I227T	probably damaging	Het
Smg1	A	G	7: 118,154,199		probably benign	Het
Ssu2	A	T	6: 112,384,427	L23M	probably benign	Het
St5	G	A	7: 109,525,326	Q686*	probably null	Het
Syne2	A	G	12: 76,094,279		probably null	Het
Tekt1	T	C	11: 72,351,935	T249A	probably benign	Het
Tfr2	T	C	5: 137,571,692	V120A	probably benign	Het
Thsd7b	C	T	1: 129,678,109	P529L	probably damaging	Het
Tll1	C	T	8: 64,025,107	D871N	probably damaging	Het
Tlr11	A	C	14: 50,361,207	I217L	probably benign	Het
Tmem87b	T	A	2: 128,831,559	V241D	probably damaging	Het
Tshz2	T	A	2: 169,885,545	I218N	possibly damaging	Het
Vmn1r18	A	T	6: 57,390,041	I176N	possibly damaging	Het
Vmn2r68	T	A	7: 85,234,052	H164L	probably benign	Het
Vmn2r74	T	C	7: 85,952,442	T663A	probably benign	Het
Vmn2r8	T	C	5: 108,797,570	T724A	probably benign	Het
Wdr11	T	C	7: 129,605,230	V289A	possibly damaging	Het
Zfp62	T	A	11: 49,216,220	D379E	probably damaging	Het
Zfp78	C	T	7: 6,378,898	P316S	probably damaging	Het
Zfyve27	T	G	19: 42,171,548	M1R	probably null	Het
Zkscan8	G	A	13: 21,525,155	P191L	probably damaging	Het

Other mutations in Slit2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00791:Slit2	APN	5	48304032	missense	possibly damaging	0.86
IGL00809:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00811:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00813:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00815:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00816:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00817:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00819:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00820:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00822:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL01077:Slit2	APN	5	48217443	splice site	probably null
IGL01375:Slit2	APN	5	48281714	splice site	probably benign
IGL01481:Slit2	APN	5	48302931	missense	probably benign	0.05
IGL01934:Slit2	APN	5	48238405	missense	possibly damaging	0.93
IGL01992:Slit2	APN	5	48238417	missense	probably benign	0.01
IGL02315:Slit2	APN	5	47987871	missense	probably damaging	0.98
IGL02328:Slit2	APN	5	48230304	missense	probably damaging	1.00
IGL02366:Slit2	APN	5	48304068	missense	possibly damaging	0.53
IGL02526:Slit2	APN	5	48304223	nonsense	probably null
IGL02852:Slit2	APN	5	48244672	missense	probably damaging	1.00
IGL02887:Slit2	APN	5	48217474	missense	probably benign	0.44
IGL03123:Slit2	APN	5	48211339	missense	probably damaging	1.00
IGL03182:Slit2	APN	5	48220053	missense	possibly damaging	0.77
P0025:Slit2	UTSW	5	48304035	missense	probably damaging	0.96
R0032:Slit2	UTSW	5	48256856	missense	probably damaging	0.99
R0032:Slit2	UTSW	5	48256856	missense	probably damaging	0.99
R0055:Slit2	UTSW	5	48281726	nonsense	probably null
R0055:Slit2	UTSW	5	48281726	nonsense	probably null
R0267:Slit2	UTSW	5	48182331	splice site	probably benign
R0552:Slit2	UTSW	5	48238379	missense	probably damaging	1.00
R0610:Slit2	UTSW	5	48275674	missense	possibly damaging	0.77
R0883:Slit2	UTSW	5	48245573	splice site	probably benign
R1390:Slit2	UTSW	5	48217490	missense	probably benign	0.06
R1442:Slit2	UTSW	5	48238383	missense	probably damaging	0.96
R1453:Slit2	UTSW	5	48257051	missense	possibly damaging	0.88
R1508:Slit2	UTSW	5	48192249	missense	probably damaging	0.98
R1639:Slit2	UTSW	5	48259654	missense	probably damaging	1.00
R1705:Slit2	UTSW	5	48189472	missense	probably damaging	0.99
R1828:Slit2	UTSW	5	48304030	missense	probably damaging	1.00
R1897:Slit2	UTSW	5	48238423	missense	probably damaging	1.00
R1919:Slit2	UTSW	5	48191016	unclassified	probably benign
R1982:Slit2	UTSW	5	48249836	missense	probably damaging	1.00
R2013:Slit2	UTSW	5	48302490	missense	probably damaging	1.00
R2136:Slit2	UTSW	5	48304225	missense	probably benign	0.03
R2655:Slit2	UTSW	5	48189575	missense	possibly damaging	0.88
R3402:Slit2	UTSW	5	48283421	missense	probably damaging	0.98
R3724:Slit2	UTSW	5	48256883	critical splice donor site	probably null
R4176:Slit2	UTSW	5	48237244	splice site	probably null
R4306:Slit2	UTSW	5	48302783	missense	possibly damaging	0.83
R4397:Slit2	UTSW	5	48220081	critical splice donor site	probably null
R4525:Slit2	UTSW	5	48249873	missense	probably damaging	1.00
R4688:Slit2	UTSW	5	48257003	splice site	probably null
R5026:Slit2	UTSW	5	48256805	missense	probably damaging	0.99
R5138:Slit2	UTSW	5	48281967	missense	probably damaging	1.00
R5465:Slit2	UTSW	5	48249912	missense	probably damaging	1.00
R5471:Slit2	UTSW	5	48189555	missense	probably damaging	1.00
R5699:Slit2	UTSW	5	48220991	critical splice donor site	probably null
R5735:Slit2	UTSW	5	48259616	missense	probably damaging	1.00
R5834:Slit2	UTSW	5	48259647	missense	probably damaging	1.00
R5967:Slit2	UTSW	5	47985164	missense	probably damaging	0.99
R6150:Slit2	UTSW	5	48304174	missense	probably damaging	1.00
R6219:Slit2	UTSW	5	48302428	missense	possibly damaging	0.53
R6344:Slit2	UTSW	5	48219681	missense	probably benign	0.07
R6408:Slit2	UTSW	5	47984986	unclassified	probably benign
R6479:Slit2	UTSW	5	48231989	missense	probably damaging	1.00
R6526:Slit2	UTSW	5	48304167	missense	probably damaging	0.99
R6959:Slit2	UTSW	5	48238385	missense	possibly damaging	0.83
R7139:Slit2	UTSW	5	48244683	missense	probably benign	0.19
R7201:Slit2	UTSW	5	48237285	missense	probably null	0.85
R7472:Slit2	UTSW	5	48256838	missense	probably damaging	0.97
R7491:Slit2	UTSW	5	48219994	missense	probably benign	0.18
R7566:Slit2	UTSW	5	48249897	missense	probably damaging	0.99
R7622:Slit2	UTSW	5	47985205	missense	probably damaging	0.98
R7831:Slit2	UTSW	5	48244683	missense	probably benign	0.19
R7870:Slit2	UTSW	5	48302307	missense	probably damaging	0.99
R7899:Slit2	UTSW	5	48247185	missense	possibly damaging	0.89
R7969:Slit2	UTSW	5	48304036	missense	possibly damaging	0.47
R7984:Slit2	UTSW	5	48176123	intron	probably benign
R8021:Slit2	UTSW	5	48302492	nonsense	probably null
R8253:Slit2	UTSW	5	48275671	missense	probably benign	0.00
R8321:Slit2	UTSW	5	48230267	missense	probably damaging	1.00
R8426:Slit2	UTSW	5	48224763	missense	probably benign	0.00
R8513:Slit2	UTSW	5	48224708	nonsense	probably null
R8756:Slit2	UTSW	5	48302487	nonsense	probably null
R8796:Slit2	UTSW	5	48302848	missense	probably benign	0.01
R8799:Slit2	UTSW	5	48304182	missense	possibly damaging	0.73
R8947:Slit2	UTSW	5	48249798	missense	probably damaging	1.00
R9005:Slit2	UTSW	5	48302518	missense	possibly damaging	0.73
R9173:Slit2	UTSW	5	48219943	missense	probably damaging	0.98
R9310:Slit2	UTSW	5	48192226	missense	possibly damaging	0.59
R9365:Slit2	UTSW	5	48304192	missense	probably benign	0.04
Z1088:Slit2	UTSW	5	48302353	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CATTGACTTTGATGACTGCCAAG -3'
(R):5'- ATGTTTGTCTGAGGCCGAAC -3'

Sequencing Primer
(F):5'- TGTAAAAACGGTGCTCACTGC -3'
(R):5'- GCCGAACCTTGGCTGAAG -3'

Posted On

2014-06-30