Mutagenetix > Incidental Mutation

Incidental Mutation 'R0121:Or4k35'

21021

Institutional Source

Beutler Lab

Gene Symbol

Or4k35

Ensembl Gene

ENSMUSG00000074965

Gene Name

olfactory receptor family 4 subfamily K member 35

Synonyms

MOR248-11, Olfr1277, GA_x6K02T2Q125-72321818-72320907

MMRRC Submission

038406-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.075) question?

Stock #

R0121 (G1)

Quality Score

225

Status

Validated (trace)

Chromosome

Chromosomal Location

111099799-111100710 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 111100659 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Cysteine to Serine at position 18 (C18S)

Ref Sequence

ENSEMBL: ENSMUSP00000150703 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000099619] [ENSMUST00000214760]

AlphaFold

Q8VF41

Predicted Effect

probably benign
Transcript: ENSMUST00000099619
AA Change: C18S

PolyPhen 2 Score 0.010 (Sensitivity: 0.96; Specificity: 0.77)

SMART Domains

Protein: ENSMUSP00000097214
Gene: ENSMUSG00000074965
AA Change: C18S

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	303	5.5e-50	PFAM
Pfam:7tm_1	41	287	7.2e-20	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000214760
AA Change: C18S

PolyPhen 2 Score 0.010 (Sensitivity: 0.96; Specificity: 0.77)

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.0%
3x: 98.0%
10x: 95.5%
20x: 89.8%

Validation Efficiency

100% (63/63)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 55 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca12	T	C	1: 71,298,945 (GRCm39)		probably null	Het
Adgra3	T	C	5: 50,183,128 (GRCm39)		probably benign	Het
Anxa7	A	T	14: 20,510,227 (GRCm39)	L386M	probably damaging	Het
Ap2b1	A	G	11: 83,212,793 (GRCm39)	M58V	possibly damaging	Het
Arfip2	A	G	7: 105,285,578 (GRCm39)	L224P	probably damaging	Het
Arhgap20	A	G	9: 51,750,251 (GRCm39)	N373S	possibly damaging	Het
Asph	T	C	4: 9,635,918 (GRCm39)	D73G	probably damaging	Het
Atp1a2	T	A	1: 172,116,909 (GRCm39)	E236V	probably damaging	Het
Atp2a1	A	G	7: 126,057,116 (GRCm39)	S170P	probably damaging	Het
Atp4a	C	G	7: 30,419,526 (GRCm39)	R659G	probably benign	Het
B4galnt3	C	T	6: 120,191,999 (GRCm39)	R578H	probably benign	Het
Ccdc178	C	A	18: 21,978,081 (GRCm39)		probably null	Het
Ccnh	T	A	13: 85,354,312 (GRCm39)	M252K	probably damaging	Het
Clec4b2	A	G	6: 123,181,131 (GRCm39)	D172G	probably benign	Het
Col1a1	A	G	11: 94,828,895 (GRCm39)	E79G	unknown	Het
Csf3r	A	G	4: 125,923,642 (GRCm39)	N51D	probably benign	Het
Cul7	C	T	17: 46,974,299 (GRCm39)	L1489F	probably damaging	Het
Cyp2b13	G	A	7: 25,786,010 (GRCm39)	C309Y	probably benign	Het
Dync2h1	A	T	9: 7,001,327 (GRCm39)		probably benign	Het
Edn1	A	G	13: 42,458,741 (GRCm39)	T135A	probably benign	Het
Ephb2	A	G	4: 136,498,368 (GRCm39)	I237T	probably damaging	Het
Fam111a	T	A	19: 12,561,444 (GRCm39)	F12L	probably benign	Het
Foxi2	C	A	7: 135,013,640 (GRCm39)	A290E	probably benign	Het
Gabra6	A	G	11: 42,205,798 (GRCm39)	S353P	probably benign	Het
Gm4847	T	C	1: 166,469,857 (GRCm39)	D72G	probably damaging	Het
Grhl3	A	G	4: 135,279,860 (GRCm39)	I398T	probably damaging	Het
Gtdc1	T	C	2: 44,455,550 (GRCm39)		probably benign	Het
Kel	A	C	6: 41,678,998 (GRCm39)		probably benign	Het
L3mbtl3	C	T	10: 26,189,768 (GRCm39)	D499N	unknown	Het
Lama1	T	A	17: 68,105,508 (GRCm39)		probably benign	Het
Mamdc2	T	A	19: 23,288,223 (GRCm39)	E605V	probably benign	Het
Nolc1	G	A	19: 46,069,817 (GRCm39)		probably benign	Het
Nudt12	A	T	17: 59,314,634 (GRCm39)	S317T	possibly damaging	Het
Optn	C	T	2: 5,028,926 (GRCm39)	G526R	probably damaging	Het
Or5w20	A	G	2: 87,727,434 (GRCm39)	K297R	possibly damaging	Het
Or8g23	T	A	9: 38,971,056 (GRCm39)	K302M	probably damaging	Het
Or8k38	A	G	2: 86,488,163 (GRCm39)	V213A	probably benign	Het
Pbld1	C	T	10: 62,907,282 (GRCm39)		probably benign	Het
Prl8a9	T	G	13: 27,744,589 (GRCm39)	N84T	probably benign	Het
Psph	T	A	5: 129,868,633 (GRCm39)		probably benign	Het
Sbf2	A	G	7: 110,088,426 (GRCm39)		probably null	Het
Senp6	A	G	9: 80,023,952 (GRCm39)	D405G	probably benign	Het
Serpinb1a	T	A	13: 33,032,754 (GRCm39)		probably benign	Het
Slc2a9	T	C	5: 38,556,086 (GRCm39)	I287V	probably benign	Het
Sptbn2	T	C	19: 4,795,321 (GRCm39)	F1593S	probably damaging	Het
Tcf21	T	C	10: 22,695,706 (GRCm39)	T33A	probably benign	Het
Tdrd3	A	T	14: 87,776,915 (GRCm39)	Q727L	probably damaging	Het
Tecpr1	C	T	5: 144,147,017 (GRCm39)	E450K	probably benign	Het
Tenm3	G	A	8: 48,795,694 (GRCm39)	T532I	probably damaging	Het
Tg	A	T	15: 66,612,630 (GRCm39)	Q396L	probably benign	Het
Tmtc3	A	G	10: 100,294,770 (GRCm39)		probably benign	Het
Twnk	T	C	19: 44,997,704 (GRCm39)		probably benign	Het
Ubac1	A	G	2: 25,898,871 (GRCm39)		probably null	Het
Ubn2	T	C	6: 38,429,793 (GRCm39)		probably benign	Het
Zfp944	T	A	17: 22,558,249 (GRCm39)	T333S	possibly damaging	Het

Other mutations in Or4k35

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01552:Or4k35	APN	2	111,100,257 (GRCm39)	missense	probably damaging	1.00
IGL02550:Or4k35	APN	2	111,100,349 (GRCm39)	missense	probably damaging	0.99
IGL02661:Or4k35	APN	2	111,099,811 (GRCm39)	missense	possibly damaging	0.56
IGL02940:Or4k35	APN	2	111,100,073 (GRCm39)	missense	probably damaging	0.99
R0402:Or4k35	UTSW	2	111,100,208 (GRCm39)	missense	probably damaging	1.00
R0903:Or4k35	UTSW	2	111,100,701 (GRCm39)	missense	probably benign
R1804:Or4k35	UTSW	2	111,100,275 (GRCm39)	missense	probably benign
R1806:Or4k35	UTSW	2	111,100,622 (GRCm39)	missense	possibly damaging	0.65
R1965:Or4k35	UTSW	2	111,099,938 (GRCm39)	missense	probably damaging	1.00
R3718:Or4k35	UTSW	2	111,100,571 (GRCm39)	missense	probably benign
R4044:Or4k35	UTSW	2	111,099,927 (GRCm39)	missense	probably benign	0.01
R4401:Or4k35	UTSW	2	111,100,178 (GRCm39)	missense	probably damaging	1.00
R4518:Or4k35	UTSW	2	111,100,263 (GRCm39)	missense	probably benign
R5309:Or4k35	UTSW	2	111,100,655 (GRCm39)	missense	probably benign	0.00
R5312:Or4k35	UTSW	2	111,100,655 (GRCm39)	missense	probably benign	0.00
R5367:Or4k35	UTSW	2	111,100,235 (GRCm39)	missense	possibly damaging	0.81
R5727:Or4k35	UTSW	2	111,100,197 (GRCm39)	nonsense	probably null
R5772:Or4k35	UTSW	2	111,100,057 (GRCm39)	nonsense	probably null
R5827:Or4k35	UTSW	2	111,100,266 (GRCm39)	missense	probably damaging	1.00
R5882:Or4k35	UTSW	2	111,100,484 (GRCm39)	missense	probably damaging	0.99
R6036:Or4k35	UTSW	2	111,099,957 (GRCm39)	missense	probably damaging	1.00
R6036:Or4k35	UTSW	2	111,099,957 (GRCm39)	missense	probably damaging	1.00
R6728:Or4k35	UTSW	2	111,100,018 (GRCm39)	missense	probably benign	0.00
R7629:Or4k35	UTSW	2	111,100,221 (GRCm39)	missense	probably benign	0.00
R8377:Or4k35	UTSW	2	111,099,983 (GRCm39)	missense	probably damaging	1.00
R8870:Or4k35	UTSW	2	111,100,464 (GRCm39)	missense	possibly damaging	0.61
R9100:Or4k35	UTSW	2	111,100,094 (GRCm39)	missense	probably benign	0.35
R9668:Or4k35	UTSW	2	111,100,287 (GRCm39)	missense	probably benign	0.03
R9690:Or4k35	UTSW	2	111,099,822 (GRCm39)	missense	probably damaging	0.98
R9715:Or4k35	UTSW	2	111,100,623 (GRCm39)	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- TGCACCCTCCAAAAGAGATCGTCTTTA -3'
(R):5'- GCCATTGTTTTGTCAATAGCCATCACA -3'

Sequencing Primer
(F):5'- CTCCAAAAGAGATCGTCTTTATTTCC -3'
(R):5'- CCAAATGCTAAGGTCATTTCCAAAG -3'

Posted On

2013-04-11