Incidental Mutation 'R1874:Xkr6'
ID211085
Institutional Source Beutler Lab
Gene Symbol Xkr6
Ensembl Gene ENSMUSG00000035067
Gene NameX-linked Kx blood group related 6
Synonyms
MMRRC Submission 039896-MU
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.127) question?
Stock #R1874 (G1)
Quality Score225
Status Validated
Chromosome14
Chromosomal Location63606503-63820809 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) C to A at 63798296 bp
ZygosityHeterozygous
Amino Acid Change Alanine to Glutamic Acid at position 26 (A26E)
Ref Sequence ENSEMBL: ENSMUSP00000112691 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000119973] [ENSMUST00000120820]
Predicted Effect unknown
Transcript: ENSMUST00000119973
AA Change: A282E
SMART Domains Protein: ENSMUSP00000113708
Gene: ENSMUSG00000035067
AA Change: A282E

DomainStartEndE-ValueType
low complexity region 25 51 N/A INTRINSIC
Pfam:XK-related 127 498 1.1e-125 PFAM
low complexity region 627 638 N/A INTRINSIC
Predicted Effect unknown
Transcript: ENSMUST00000120820
AA Change: A26E
SMART Domains Protein: ENSMUSP00000112691
Gene: ENSMUSG00000035067
AA Change: A26E

DomainStartEndE-ValueType
Pfam:XK-related 1 242 4.9e-105 PFAM
low complexity region 371 382 N/A INTRINSIC
Meta Mutation Damage Score 0.8834 question?
Coding Region Coverage
  • 1x: 97.5%
  • 3x: 97.0%
  • 10x: 95.8%
  • 20x: 94.1%
Validation Efficiency 96% (105/109)
Allele List at MGI
Other mutations in this stock
Total: 104 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
AA986860 A G 1: 130,742,691 S217G probably benign Het
Adrb3 C A 8: 27,227,563 R286L probably damaging Het
Akap11 T A 14: 78,511,866 D1027V probably benign Het
Ank3 A T 10: 69,898,083 I726F probably damaging Het
Ankmy2 T A 12: 36,165,931 D43E possibly damaging Het
Ankrd34b A G 13: 92,439,556 D432G probably damaging Het
Ano3 A C 2: 110,884,872 S74A probably benign Het
B4galnt4 T A 7: 141,070,526 S769T probably damaging Het
Bicral T A 17: 46,825,178 T369S probably benign Het
Blm A G 7: 80,497,418 L738P probably damaging Het
Bpifb3 A G 2: 153,925,840 T278A probably benign Het
Bpifb5 A G 2: 154,227,202 probably benign Het
Brd8 G C 18: 34,610,474 P266R probably damaging Het
Btaf1 A T 19: 36,980,583 M587L probably benign Het
Casz1 C G 4: 148,943,211 T1015S probably damaging Het
Cdh23 A G 10: 60,436,818 I524T possibly damaging Het
Celsr3 T C 9: 108,835,838 V1825A probably benign Het
Cenpf A G 1: 189,683,816 L104P probably damaging Het
Clasp1 G T 1: 118,600,585 probably null Het
Coprs A G 8: 13,885,112 W148R probably damaging Het
Cpne1 A G 2: 156,078,382 S168P probably damaging Het
Cpxm2 T C 7: 132,059,834 Y408C probably damaging Het
Ctnna3 A G 10: 63,504,107 E24G possibly damaging Het
Cubn T A 2: 13,323,002 S2671C probably damaging Het
Cyp4f39 T A 17: 32,483,324 F265Y probably damaging Het
Dgkq C A 5: 108,660,595 R34L probably benign Het
Dnajc7 C T 11: 100,599,313 probably benign Het
Eml6 T G 11: 29,831,136 D632A probably damaging Het
Fbxl18 G A 5: 142,886,223 A419V probably damaging Het
Fbxw22 A T 9: 109,385,111 C212* probably null Het
Ffar2 A G 7: 30,819,414 probably null Het
Fga A T 3: 83,032,721 T561S probably damaging Het
Fry A G 5: 150,345,921 Y159C probably damaging Het
Gal3st1 A G 11: 3,998,231 Y146C probably damaging Het
Gapvd1 A T 2: 34,706,021 H788Q probably damaging Het
Gimap7 G A 6: 48,723,515 V12I possibly damaging Het
Gli2 C A 1: 119,002,049 A43S possibly damaging Het
Gm15446 T C 5: 109,942,553 F224L probably damaging Het
Gm21738 C T 14: 19,418,824 V35I possibly damaging Het
Grhl1 T C 12: 24,586,156 probably benign Het
Grk6 T C 13: 55,450,273 Y53H probably damaging Het
Hcar1 C T 5: 123,879,265 R121K probably damaging Het
Hmcn1 A C 1: 150,720,695 S1797A probably damaging Het
Hsd17b7 A T 1: 169,955,993 L282Q possibly damaging Het
Irs1 TTCTCTGAGTGGCCACAGCGTCT TTCT 1: 82,289,853 probably null Het
Kif1b C T 4: 149,187,632 V1571I probably benign Het
Lpl T A 8: 68,896,619 C266S probably damaging Het
Mag G A 7: 30,909,051 H213Y probably benign Het
Mansc4 T G 6: 147,075,190 R309S probably benign Het
Mlh3 A G 12: 85,237,513 probably null Het
Mndal G A 1: 173,860,367 probably benign Het
Mrgpra2b T A 7: 47,463,994 E330V probably damaging Het
Myh3 A G 11: 67,093,179 I990V probably benign Het
Myoz2 A T 3: 123,026,116 S65T probably damaging Het
Naa16 T C 14: 79,355,743 E463G possibly damaging Het
Nadsyn1 A G 7: 143,797,844 F684S probably damaging Het
Notch1 T C 2: 26,481,579 E286G possibly damaging Het
Nynrin A T 14: 55,863,493 I247L probably benign Het
Olfr136 C T 17: 38,335,969 P271S probably damaging Het
Olfr644 T C 7: 104,068,129 I301V probably null Het
Olfr981 T A 9: 40,022,855 I154N possibly damaging Het
Oprm1 A G 10: 6,789,035 H54R probably benign Het
P4hb C T 11: 120,562,166 D483N probably benign Het
Pak1 T C 7: 97,871,580 S149P probably benign Het
Pars2 T C 4: 106,653,716 F232L possibly damaging Het
Pih1d2 A G 9: 50,620,945 M88V possibly damaging Het
Pms1 A T 1: 53,207,233 N382K probably benign Het
Pnliprp2 G T 19: 58,763,389 V189L probably benign Het
Pole G A 5: 110,323,664 V1425M possibly damaging Het
Pot1b T A 17: 55,654,805 Q591L probably benign Het
Ppp1r9a C T 6: 4,906,348 T301M possibly damaging Het
Psg21 T C 7: 18,650,816 E335G probably benign Het
Ptpru T A 4: 131,769,755 M1416L probably benign Het
Pxn T C 5: 115,544,990 V117A probably damaging Het
Qsox1 C T 1: 155,812,639 R54H possibly damaging Het
Rad1 A G 15: 10,488,006 E42G probably damaging Het
Rpp14 A G 14: 8,090,145 Y23C probably benign Het
Sdk2 C T 11: 113,834,956 V1156I probably benign Het
Serpina3j G T 12: 104,319,699 R371L probably benign Het
Serpinb9d T A 13: 33,197,963 probably null Het
Sirt5 C T 13: 43,370,791 S13F possibly damaging Het
Slc6a7 T A 18: 61,001,398 probably benign Het
Slx4 A G 16: 3,986,848 S701P probably benign Het
Snx29 A G 16: 11,367,681 T43A probably benign Het
Speg T C 1: 75,423,906 V2570A probably benign Het
Srrm4 T A 5: 116,453,506 probably benign Het
Stk32a A G 18: 43,261,316 Y110C probably damaging Het
Tbc1d31 G A 15: 57,916,110 G73E probably benign Het
Thsd7a A T 6: 12,555,435 I150N possibly damaging Het
Tjp1 A T 7: 65,319,253 D699E probably damaging Het
Tmem143 A G 7: 45,916,564 D437G possibly damaging Het
Tmem45a2 A G 16: 57,047,084 Y85H possibly damaging Het
Tmem45b T A 9: 31,429,087 T7S probably damaging Het
Ube4b A G 4: 149,347,971 L832P probably damaging Het
Ugp2 G T 11: 21,329,048 F379L probably damaging Het
Ugt3a2 A T 15: 9,365,351 D350V probably damaging Het
Vmn2r8 T A 5: 108,802,418 T188S possibly damaging Het
Vwa7 C G 17: 35,017,112 P14R probably benign Het
Vwc2 C A 11: 11,261,495 T317K probably damaging Het
Vwf A T 6: 125,628,372 Q906L probably benign Het
Wdr49 A G 3: 75,429,347 V351A probably damaging Het
Wdr7 A G 18: 63,728,504 S196G probably benign Het
Zcchc11 T A 4: 108,550,725 V1397D probably damaging Het
Zfp955b T C 17: 33,305,453 I47V probably benign Het
Other mutations in Xkr6
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00335:Xkr6 APN 14 63819215 missense probably damaging 0.96
IGL01419:Xkr6 APN 14 63818876 missense probably benign 0.39
IGL01450:Xkr6 APN 14 63798215 missense probably damaging 0.98
IGL02010:Xkr6 APN 14 63819204 missense probably benign 0.39
IGL02352:Xkr6 APN 14 63819707 missense unknown
IGL02359:Xkr6 APN 14 63819707 missense unknown
R0148:Xkr6 UTSW 14 63819549 missense unknown
R0521:Xkr6 UTSW 14 63819422 missense probably benign 0.28
R1555:Xkr6 UTSW 14 63818925 missense unknown
R1619:Xkr6 UTSW 14 63819317 missense probably benign 0.39
R2864:Xkr6 UTSW 14 63819756 missense unknown
R2960:Xkr6 UTSW 14 63607137 missense possibly damaging 0.71
R3014:Xkr6 UTSW 14 63819344 missense unknown
R4888:Xkr6 UTSW 14 63819504 missense unknown
R5019:Xkr6 UTSW 14 63819066 missense unknown
R5193:Xkr6 UTSW 14 63818907 missense possibly damaging 0.92
R5354:Xkr6 UTSW 14 63818904 missense possibly damaging 0.48
R5485:Xkr6 UTSW 14 63819384 missense unknown
R5825:Xkr6 UTSW 14 63819032 missense probably benign 0.39
R5885:Xkr6 UTSW 14 63606911 missense probably damaging 0.99
R6074:Xkr6 UTSW 14 63607070 missense possibly damaging 0.67
R6861:Xkr6 UTSW 14 63819644 missense probably benign 0.39
R7289:Xkr6 UTSW 14 63798299 missense unknown
R7477:Xkr6 UTSW 14 63606680 missense possibly damaging 0.84
R7525:Xkr6 UTSW 14 63819161 missense probably benign 0.39
R7528:Xkr6 UTSW 14 63819161 missense probably benign 0.39
R7529:Xkr6 UTSW 14 63819161 missense probably benign 0.39
R7646:Xkr6 UTSW 14 63606974 missense probably damaging 0.99
R7686:Xkr6 UTSW 14 63606846 missense possibly damaging 0.96
R7697:Xkr6 UTSW 14 63607179 missense probably damaging 0.99
Z1176:Xkr6 UTSW 14 63606945 missense probably benign 0.08
Predicted Primers PCR Primer
(F):5'- ACAGGAAGTTTGGGCGTTAG -3'
(R):5'- TGAACTTAGAGCCAGGACCC -3'

Sequencing Primer
(F):5'- AGTTTGGGCGTTAGGGGGC -3'
(R):5'- CCATGTCGGCAAATGAGGC -3'
Posted On2014-06-30