Mutagenetix > Incidental Mutation

Incidental Mutation 'R1891:Hspg2'

211469

Institutional Source

Beutler Lab

Gene Symbol

Hspg2

Ensembl Gene

ENSMUSG00000028763

Gene Name

perlecan (heparan sulfate proteoglycan 2)

Synonyms

Plc, Pcn, per

MMRRC Submission

039911-MU

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R1891 (G1)

Quality Score

201

Status

Not validated

Chromosome

Chromosomal Location

137468769-137570630 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 137565490 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Glutamic Acid at position 4126 (D4126E)

Ref Sequence

ENSEMBL: ENSMUSP00000131316 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000030547] [ENSMUST00000171332]

AlphaFold

no structure available at present

Predicted Effect

possibly damaging
Transcript: ENSMUST00000030547
AA Change: D4118E

PolyPhen 2 Score 0.889 (Sensitivity: 0.82; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000030547
Gene: ENSMUSG00000028763
AA Change: D4118E

Domain	Start	End	E-Value	Type
signal peptide	1	25	N/A	INTRINSIC
low complexity region	53	78	N/A	INTRINSIC
SEA	80	194	4.94e-18	SMART
LDLa	198	236	4.51e-12	SMART
low complexity region	253	267	N/A	INTRINSIC
LDLa	284	321	1.62e-13	SMART
LDLa	324	361	2.59e-12	SMART
LDLa	367	405	3.86e-11	SMART
IGc2	419	486	4.06e-13	SMART
LamB	590	717	7.45e-54	SMART
EGF_Lam	764	811	6.05e-14	SMART
EGF_Lam	814	869	3.82e-2	SMART
EGF_like	871	921	6.74e-1	SMART
low complexity region	934	939	N/A	INTRINSIC
LamB	985	1112	2.87e-55	SMART
Pfam:Laminin_EGF	1113	1156	7.5e-5	PFAM
EGF_Lam	1159	1206	1.1e-11	SMART
EGF_Lam	1209	1263	2.46e-5	SMART
EGF_Lam	1275	1322	4.96e-10	SMART
LamB	1391	1516	5.3e-59	SMART
EGF_like	1516	1560	3.36e0	SMART
EGF_Lam	1563	1610	2.66e-10	SMART
EGF_Lam	1613	1668	3.73e-5	SMART
IGc2	1688	1752	1.76e-8	SMART
IGc2	1783	1846	5.97e-11	SMART
IGc2	1877	1939	8.57e-12	SMART
IGc2	1967	2031	1.82e-15	SMART
IGc2	2056	2117	4.81e-15	SMART
IGc2	2157	2216	1.37e-10	SMART
IGc2	2251	2312	5.88e-10	SMART
low complexity region	2333	2344	N/A	INTRINSIC
IGc2	2347	2408	1.97e-11	SMART
IGc2	2441	2502	1.59e-15	SMART
low complexity region	2517	2528	N/A	INTRINSIC
IGc2	2538	2599	3.08e-13	SMART
IGc2	2634	2695	9.25e-17	SMART
low complexity region	2704	2728	N/A	INTRINSIC
IGc2	2731	2792	1.84e-11	SMART
IGc2	2828	2889	2.11e-11	SMART
IGc2	2926	2987	3.25e-12	SMART
IG	3017	3098	3.62e-10	SMART
IGc2	3114	3180	9.05e-11	SMART
IGc2	3212	3273	2.44e-16	SMART
IGc2	3299	3360	2.26e-11	SMART
IGc2	3400	3461	6.81e-6	SMART
IGc2	3489	3550	1.59e-15	SMART
IGc2	3575	3636	2.54e-14	SMART
LamG	3672	3813	3.41e-39	SMART
EGF	3832	3866	6.91e-9	SMART
EGF	3872	3907	4.46e-3	SMART
LamG	3934	4070	4.78e-43	SMART
EGF	4092	4126	1.17e-6	SMART
EGF	4131	4161	1.87e-5	SMART
LamG	4211	4348	1.33e-41	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000155648

Predicted Effect

probably damaging
Transcript: ENSMUST00000171332
AA Change: D4126E

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000131316
Gene: ENSMUSG00000028763
AA Change: D4126E

Domain	Start	End	E-Value	Type
signal peptide	1	25	N/A	INTRINSIC
low complexity region	53	78	N/A	INTRINSIC
SEA	80	194	4.94e-18	SMART
LDLa	198	236	4.51e-12	SMART
low complexity region	253	267	N/A	INTRINSIC
LDLa	284	321	1.62e-13	SMART
LDLa	324	361	2.59e-12	SMART
LDLa	367	405	3.86e-11	SMART
IGc2	419	486	4.06e-13	SMART
LamB	590	717	7.45e-54	SMART
EGF_Lam	764	811	6.05e-14	SMART
EGF_Lam	814	869	3.82e-2	SMART
EGF_like	871	921	6.74e-1	SMART
low complexity region	934	939	N/A	INTRINSIC
LamB	985	1112	2.87e-55	SMART
Pfam:Laminin_EGF	1114	1156	7.9e-5	PFAM
EGF_Lam	1159	1206	1.1e-11	SMART
EGF_Lam	1209	1263	2.46e-5	SMART
EGF_Lam	1275	1322	4.96e-10	SMART
LamB	1391	1516	5.3e-59	SMART
EGF_like	1516	1560	3.36e0	SMART
EGF_Lam	1563	1610	2.66e-10	SMART
EGF_Lam	1613	1668	3.73e-5	SMART
IGc2	1688	1752	1.76e-8	SMART
IGc2	1783	1846	5.97e-11	SMART
IGc2	1877	1939	8.57e-12	SMART
IGc2	1967	2031	1.82e-15	SMART
IGc2	2062	2123	4.81e-15	SMART
IGc2	2163	2222	1.37e-10	SMART
IGc2	2257	2318	5.88e-10	SMART
low complexity region	2339	2350	N/A	INTRINSIC
IGc2	2353	2414	1.97e-11	SMART
IGc2	2447	2508	1.59e-15	SMART
low complexity region	2523	2534	N/A	INTRINSIC
IGc2	2544	2605	3.08e-13	SMART
IGc2	2640	2701	9.25e-17	SMART
low complexity region	2710	2734	N/A	INTRINSIC
IGc2	2737	2798	1.84e-11	SMART
IGc2	2836	2897	2.11e-11	SMART
IGc2	2934	2995	3.25e-12	SMART
IG	3025	3106	3.62e-10	SMART
IGc2	3122	3188	9.05e-11	SMART
IGc2	3220	3281	2.44e-16	SMART
IGc2	3307	3368	2.26e-11	SMART
IGc2	3408	3469	6.81e-6	SMART
IGc2	3497	3558	1.59e-15	SMART
IGc2	3583	3644	2.54e-14	SMART
LamG	3680	3821	3.41e-39	SMART
EGF	3840	3874	6.91e-9	SMART
EGF	3880	3915	4.46e-3	SMART
LamG	3942	4078	4.78e-43	SMART
EGF	4100	4134	1.17e-6	SMART
EGF	4139	4169	1.87e-5	SMART
LamG	4219	4356	1.33e-41	SMART

Coding Region Coverage

1x: 97.5%
3x: 96.9%
10x: 95.4%
20x: 92.7%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes the perlecan protein, which consists of a core protein to which three long chains of glycosaminoglycans (heparan sulfate or chondroitin sulfate) are attached. The perlecan protein is a large multidomain proteoglycan that binds to and cross-links many extracellular matrix components and cell-surface molecules. It has been shown that this protein interacts with laminin, prolargin, collagen type IV, FGFBP1, FBLN2, FGF7 and transthyretin, etc., and it plays essential roles in multiple biological activities. Perlecan is a key component of the vascular extracellular matrix, where it helps to maintain the endothelial barrier function. It is a potent inhibitor of smooth muscle cell proliferation and is thus thought to help maintain vascular homeostasis. It can also promote growth factor (e.g., FGF2) activity and thus stimulate endothelial growth and re-generation. It is a major component of basement membranes, where it is involved in the stabilization of other molecules as well as being involved with glomerular permeability to macromolecules and cell adhesion. Mutations in this gene cause Schwartz-Jampel syndrome type 1, Silverman-Handmaker type of dyssegmental dysplasia, and tardive dyskinesia. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, May 2014]
PHENOTYPE: Homozygous targeted null mutants die either at embryonic day 10.5 with cardiac outflow defects and/or brain exencephaly or at birth with skeletal dysplasia including micromelia and craniofacial defects. An exon 3 deletion mutant shows only a lens defect. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 96 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700074P13Rik	A	T	6: 40,926,033 (GRCm38)	M135K	possibly damaging	Het
Abca7	T	C	10: 80,005,040 (GRCm38)	I921T	possibly damaging	Het
Abca8a	T	C	11: 110,091,607 (GRCm38)	K3R	probably benign	Het
Adgrl3	A	T	5: 81,512,044 (GRCm38)	D152V	probably damaging	Het
Akap6	A	T	12: 53,142,175 (GRCm38)	D2124V	possibly damaging	Het
Akt1	A	G	12: 112,659,575 (GRCm38)	F88L	probably damaging	Het
Ankrd24	T	C	10: 81,643,508 (GRCm38)		probably benign	Het
Arid4b	T	A	13: 14,136,236 (GRCm38)	N141K	possibly damaging	Het
Cacna1c	C	A	6: 118,776,519 (GRCm38)	D219Y	probably damaging	Het
Ccdc113	A	G	8: 95,540,916 (GRCm38)	K170E	probably damaging	Het
Ccdc151	G	T	9: 21,995,381 (GRCm38)		probably null	Het
Ceacam9	A	G	7: 16,723,955 (GRCm38)	E136G	probably damaging	Het
Cfap43	A	G	19: 47,813,941 (GRCm38)	L333P	probably damaging	Het
Chl1	A	G	6: 103,714,583 (GRCm38)	D1062G	possibly damaging	Het
Ckb	TCCACCACCA	TCCACCA	12: 111,669,645 (GRCm38)		probably benign	Het
Clpp	T	A	17: 56,991,307 (GRCm38)	V91E	probably damaging	Het
Cndp1	A	T	18: 84,619,633 (GRCm38)	H325Q	probably null	Het
Cngb3	A	G	4: 19,366,446 (GRCm38)	N169S	probably benign	Het
Cog6	A	C	3: 52,983,180 (GRCm38)	I613R	probably benign	Het
Creb3l1	A	G	2: 91,987,040 (GRCm38)	L376P	probably damaging	Het
Cry2	A	T	2: 92,413,640 (GRCm38)	V396D	possibly damaging	Het
Cxxc5	A	G	18: 35,859,265 (GRCm38)	M240V	possibly damaging	Het
Defa28	G	A	8: 21,583,785 (GRCm38)	C68Y	probably damaging	Het
Dgcr14	C	T	16: 17,907,780 (GRCm38)	W183*	probably null	Het
Ecd	A	G	14: 20,338,159 (GRCm38)	I187T	probably damaging	Het
Erg28	A	G	12: 85,816,188 (GRCm38)	S117P	probably benign	Het
Ergic2	A	T	6: 148,183,079 (GRCm38)	C319S	probably damaging	Het
Evc2	A	C	5: 37,392,079 (GRCm38)	D773A	probably damaging	Het
Fam151b	T	A	13: 92,450,170 (GRCm38)	T252S	probably benign	Het
Fbxo28	A	T	1: 182,317,824 (GRCm38)	M233K	probably benign	Het
Fbxw26	T	G	9: 109,722,164 (GRCm38)	D355A	probably benign	Het
Gm13101	A	T	4: 143,966,665 (GRCm38)	V81E	probably damaging	Het
Gm4884	G	C	7: 41,043,115 (GRCm38)	E169D	possibly damaging	Het
Hk2	C	T	6: 82,749,283 (GRCm38)	R94Q	probably benign	Het
Hps4	G	A	5: 112,369,556 (GRCm38)		probably null	Het
Kif13a	T	C	13: 46,929,219 (GRCm38)	E48G	possibly damaging	Het
Krt31	T	A	11: 100,047,808 (GRCm38)	N320Y	probably damaging	Het
Lca5	T	C	9: 83,395,608 (GRCm38)	Y561C	probably damaging	Het
Lrrk1	G	A	7: 66,279,300 (GRCm38)	L1195F	probably damaging	Het
Ly6g6d	A	C	17: 35,074,293 (GRCm38)	Y25*	probably null	Het
Map3k13	T	G	16: 21,911,086 (GRCm38)	M489R	probably damaging	Het
Mcm6	C	T	1: 128,335,810 (GRCm38)	R658H	probably damaging	Het
Mecp2	C	T	X: 74,037,175 (GRCm38)	A79T	probably damaging	Het
Mitf	A	G	6: 97,941,276 (GRCm38)	T94A	probably benign	Het
Mpo	T	A	11: 87,801,280 (GRCm38)	L513*	probably null	Het
Mst1r	T	A	9: 107,913,462 (GRCm38)	N722K	probably damaging	Het
Mthfd1l	T	A	10: 4,032,284 (GRCm38)	L497*	probably null	Het
Mtus1	C	T	8: 41,084,325 (GRCm38)	S118N	probably damaging	Het
Mybbp1a	C	T	11: 72,446,037 (GRCm38)	T565I	probably benign	Het
Naip2	C	T	13: 100,154,887 (GRCm38)	R1181K	probably benign	Het
Nbas	T	C	12: 13,390,972 (GRCm38)	M1101T	possibly damaging	Het
Olfr10	T	C	11: 49,317,857 (GRCm38)	F104L	probably benign	Het
Olfr1313	A	T	2: 112,072,394 (GRCm38)	L63Q	probably damaging	Het
Olfr19	T	A	16: 16,673,577 (GRCm38)	I135F	probably damaging	Het
Olfr290	T	A	7: 84,916,253 (GRCm38)	V158D	possibly damaging	Het
Olfr685	A	T	7: 105,180,547 (GRCm38)	Y270*	probably null	Het
Olfr820	T	C	10: 130,017,570 (GRCm38)	S70P	probably damaging	Het
Olfr835	T	C	9: 19,035,978 (GRCm38)	L285S	probably damaging	Het
Olfr875	T	A	9: 37,772,867 (GRCm38)	D69E	possibly damaging	Het
Oxct2b	A	G	4: 123,117,145 (GRCm38)	D286G	probably benign	Het
Pax5	A	T	4: 44,691,859 (GRCm38)	V129E	probably damaging	Het
Pax7	G	A	4: 139,784,626 (GRCm38)	R215C	probably damaging	Het
Pcdh7	A	T	5: 57,720,875 (GRCm38)	I591F	probably damaging	Het
Pcdhb22	T	C	18: 37,519,304 (GRCm38)	V275A	probably damaging	Het
Pkp3	C	T	7: 141,084,056 (GRCm38)		probably null	Het
Plekhb1	A	G	7: 100,655,392 (GRCm38)	L35P	probably damaging	Het
Pole	T	A	5: 110,332,542 (GRCm38)	F1993Y	probably damaging	Het
Prdx1	T	C	4: 116,699,254 (GRCm38)	*200R	probably null	Het
Prkdc	C	A	16: 15,725,436 (GRCm38)	T1777N	probably benign	Het
Ptpn14	G	A	1: 189,798,653 (GRCm38)	V106M	probably damaging	Het
Ptpn23	T	C	9: 110,393,800 (GRCm38)	E63G	possibly damaging	Het
Qser1	A	C	2: 104,790,099 (GRCm38)	S123A	probably benign	Het
Rbm11	A	G	16: 75,600,787 (GRCm38)	N202D	possibly damaging	Het
Robo3	T	A	9: 37,428,055 (GRCm38)	Y212F	probably damaging	Het
Sde2	G	A	1: 180,860,008 (GRCm38)	S153N	probably benign	Het
Serpinb1c	T	A	13: 32,884,252 (GRCm38)	D179V	probably benign	Het
Skint6	T	C	4: 112,846,696 (GRCm38)	D994G	possibly damaging	Het
Sorbs1	A	G	19: 40,393,460 (GRCm38)	S46P	probably damaging	Het
St8sia4	T	C	1: 95,591,708 (GRCm38)	T352A	possibly damaging	Het
Stab1	C	A	14: 31,141,330 (GRCm38)	R2133L	probably benign	Het
Stk11ip	T	C	1: 75,532,416 (GRCm38)	C730R	probably benign	Het
Tedc2	C	A	17: 24,216,318 (GRCm38)	E366*	probably null	Het
Tedc2	T	A	17: 24,216,317 (GRCm38)	E366V	probably damaging	Het
Tex33	T	A	15: 78,378,752 (GRCm38)	D234V	probably damaging	Het
Tle4	A	T	19: 14,544,786 (GRCm38)		probably null	Het
Tmem200a	T	A	10: 25,994,072 (GRCm38)	N100Y	probably damaging	Het
Tnnt2	A	T	1: 135,840,859 (GRCm38)		probably null	Het
Ttn	T	A	2: 76,875,958 (GRCm38)		probably benign	Het
Ubac1	A	G	2: 26,014,962 (GRCm38)	V88A	probably benign	Het
Urgcp	T	C	11: 5,716,910 (GRCm38)	E476G	probably benign	Het
Vmn1r201	G	A	13: 22,475,255 (GRCm38)	R213H	probably benign	Het
Vmn2r84	C	T	10: 130,386,069 (GRCm38)	V761M	possibly damaging	Het
Vwde	A	T	6: 13,187,455 (GRCm38)	Y678N	probably damaging	Het
Wnk2	C	A	13: 49,052,724 (GRCm38)	E1865*	probably null	Het
Zc3h3	A	C	15: 75,756,931 (GRCm38)	M838R	possibly damaging	Het
Zfp959	T	A	17: 55,897,604 (GRCm38)	C211S	probably damaging	Het

Other mutations in Hspg2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00089:Hspg2	APN	4	137,528,820 (GRCm38)	missense	probably damaging	1.00
IGL00339:Hspg2	APN	4	137,539,195 (GRCm38)	missense	probably damaging	1.00
IGL00943:Hspg2	APN	4	137,562,201 (GRCm38)	missense	probably benign	0.15
IGL00970:Hspg2	APN	4	137,542,590 (GRCm38)	missense	probably benign	0.09
IGL01011:Hspg2	APN	4	137,559,335 (GRCm38)	missense	probably damaging	1.00
IGL01148:Hspg2	APN	4	137,546,658 (GRCm38)	missense	probably benign	0.11
IGL01333:Hspg2	APN	4	137,540,314 (GRCm38)	missense	probably damaging	1.00
IGL01367:Hspg2	APN	4	137,538,489 (GRCm38)	missense	probably damaging	1.00
IGL01455:Hspg2	APN	4	137,553,817 (GRCm38)	missense	probably damaging	1.00
IGL01540:Hspg2	APN	4	137,519,706 (GRCm38)	missense	probably damaging	1.00
IGL01578:Hspg2	APN	4	137,539,183 (GRCm38)	missense	probably damaging	1.00
IGL01603:Hspg2	APN	4	137,552,803 (GRCm38)	missense	probably damaging	1.00
IGL01632:Hspg2	APN	4	137,514,773 (GRCm38)	missense	probably damaging	1.00
IGL01658:Hspg2	APN	4	137,564,926 (GRCm38)	missense	probably damaging	1.00
IGL01760:Hspg2	APN	4	137,512,671 (GRCm38)	missense	possibly damaging	0.60
IGL01976:Hspg2	APN	4	137,561,926 (GRCm38)	missense	probably damaging	1.00
IGL02024:Hspg2	APN	4	137,540,073 (GRCm38)	missense	probably damaging	1.00
IGL02033:Hspg2	APN	4	137,552,254 (GRCm38)	missense	probably benign
IGL02051:Hspg2	APN	4	137,568,389 (GRCm38)	unclassified	probably benign
IGL02124:Hspg2	APN	4	137,518,814 (GRCm38)	splice site	probably null
IGL02128:Hspg2	APN	4	137,564,016 (GRCm38)	missense	probably damaging	1.00
IGL02177:Hspg2	APN	4	137,515,316 (GRCm38)	missense	probably damaging	1.00
IGL02230:Hspg2	APN	4	137,518,645 (GRCm38)	missense	probably damaging	1.00
IGL02266:Hspg2	APN	4	137,510,577 (GRCm38)	missense	probably damaging	1.00
IGL02313:Hspg2	APN	4	137,508,389 (GRCm38)	missense	probably benign	0.03
IGL02477:Hspg2	APN	4	137,544,512 (GRCm38)	splice site	probably benign
IGL02514:Hspg2	APN	4	137,569,576 (GRCm38)	missense	probably benign	0.09
IGL02613:Hspg2	APN	4	137,544,420 (GRCm38)	missense	probably damaging	1.00
IGL02625:Hspg2	APN	4	137,512,642 (GRCm38)	missense	probably damaging	1.00
IGL02646:Hspg2	APN	4	137,551,848 (GRCm38)	missense	possibly damaging	0.60
IGL02651:Hspg2	APN	4	137,557,445 (GRCm38)	splice site	probably benign
IGL02701:Hspg2	APN	4	137,557,174 (GRCm38)	missense	probably damaging	0.96
IGL02833:Hspg2	APN	4	137,555,130 (GRCm38)	missense	probably benign	0.00
IGL02985:Hspg2	APN	4	137,507,803 (GRCm38)	missense	probably damaging	1.00
IGL03040:Hspg2	APN	4	137,561,825 (GRCm38)	critical splice donor site	probably null
IGL03181:Hspg2	APN	4	137,515,937 (GRCm38)	missense	probably damaging	1.00
IGL03349:Hspg2	APN	4	137,560,522 (GRCm38)	splice site	probably benign
G1patch:Hspg2	UTSW	4	137,515,307 (GRCm38)	missense	probably damaging	1.00
PIT4305001:Hspg2	UTSW	4	137,550,373 (GRCm38)	missense	possibly damaging	0.55
R0006:Hspg2	UTSW	4	137,519,931 (GRCm38)	missense	probably damaging	1.00
R0036:Hspg2	UTSW	4	137,542,849 (GRCm38)	missense	probably damaging	1.00
R0109:Hspg2	UTSW	4	137,562,201 (GRCm38)	missense	probably benign	0.15
R0131:Hspg2	UTSW	4	137,551,887 (GRCm38)	missense	probably damaging	1.00
R0131:Hspg2	UTSW	4	137,551,887 (GRCm38)	missense	probably damaging	1.00
R0132:Hspg2	UTSW	4	137,551,887 (GRCm38)	missense	probably damaging	1.00
R0245:Hspg2	UTSW	4	137,514,722 (GRCm38)	missense	probably damaging	1.00
R0388:Hspg2	UTSW	4	137,511,158 (GRCm38)	missense	probably damaging	1.00
R0389:Hspg2	UTSW	4	137,515,423 (GRCm38)	missense	possibly damaging	0.53
R0468:Hspg2	UTSW	4	137,533,529 (GRCm38)	missense	probably damaging	1.00
R0480:Hspg2	UTSW	4	137,550,024 (GRCm38)	missense	probably damaging	1.00
R0546:Hspg2	UTSW	4	137,502,294 (GRCm38)	missense	probably benign
R0599:Hspg2	UTSW	4	137,512,401 (GRCm38)	missense	probably damaging	0.98
R0652:Hspg2	UTSW	4	137,514,722 (GRCm38)	missense	probably damaging	1.00
R0671:Hspg2	UTSW	4	137,553,280 (GRCm38)	missense	probably damaging	1.00
R0760:Hspg2	UTSW	4	137,512,349 (GRCm38)	missense	probably damaging	1.00
R0883:Hspg2	UTSW	4	137,541,440 (GRCm38)	missense	probably benign	0.00
R1403:Hspg2	UTSW	4	137,540,100 (GRCm38)	missense	possibly damaging	0.90
R1417:Hspg2	UTSW	4	137,517,636 (GRCm38)	missense	probably benign
R1497:Hspg2	UTSW	4	137,548,096 (GRCm38)	missense	probably damaging	0.98
R1509:Hspg2	UTSW	4	137,511,241 (GRCm38)	splice site	probably benign
R1625:Hspg2	UTSW	4	137,518,971 (GRCm38)	missense	probably benign	0.23
R1630:Hspg2	UTSW	4	137,518,435 (GRCm38)	missense	probably damaging	1.00
R1651:Hspg2	UTSW	4	137,533,437 (GRCm38)	nonsense	probably null
R1699:Hspg2	UTSW	4	137,548,012 (GRCm38)	splice site	probably null
R1703:Hspg2	UTSW	4	137,559,151 (GRCm38)	missense	probably damaging	1.00
R1761:Hspg2	UTSW	4	137,514,673 (GRCm38)	missense	possibly damaging	0.90
R1775:Hspg2	UTSW	4	137,520,156 (GRCm38)	missense	probably damaging	0.99
R1779:Hspg2	UTSW	4	137,518,509 (GRCm38)	missense	probably damaging	1.00
R1843:Hspg2	UTSW	4	137,545,567 (GRCm38)	missense	probably damaging	1.00
R1930:Hspg2	UTSW	4	137,540,230 (GRCm38)	missense	probably damaging	1.00
R1931:Hspg2	UTSW	4	137,540,230 (GRCm38)	missense	probably damaging	1.00
R1942:Hspg2	UTSW	4	137,542,552 (GRCm38)	missense	possibly damaging	0.67
R1959:Hspg2	UTSW	4	137,564,895 (GRCm38)	missense	probably damaging	1.00
R2042:Hspg2	UTSW	4	137,568,366 (GRCm38)	missense	probably damaging	1.00
R2062:Hspg2	UTSW	4	137,559,367 (GRCm38)	missense	possibly damaging	0.79
R2098:Hspg2	UTSW	4	137,520,109 (GRCm38)	missense	probably damaging	1.00
R2158:Hspg2	UTSW	4	137,517,604 (GRCm38)	missense	probably damaging	1.00
R2280:Hspg2	UTSW	4	137,522,043 (GRCm38)	missense	probably damaging	1.00
R2890:Hspg2	UTSW	4	137,549,574 (GRCm38)	missense	probably damaging	1.00
R2927:Hspg2	UTSW	4	137,518,940 (GRCm38)	missense	probably damaging	1.00
R3428:Hspg2	UTSW	4	137,555,290 (GRCm38)	missense	probably damaging	1.00
R3744:Hspg2	UTSW	4	137,565,504 (GRCm38)	splice site	probably benign
R3873:Hspg2	UTSW	4	137,539,349 (GRCm38)	missense	probably damaging	1.00
R3874:Hspg2	UTSW	4	137,539,349 (GRCm38)	missense	probably damaging	1.00
R3917:Hspg2	UTSW	4	137,559,314 (GRCm38)	missense	probably damaging	1.00
R3932:Hspg2	UTSW	4	137,515,568 (GRCm38)	missense	probably damaging	0.99
R3933:Hspg2	UTSW	4	137,515,568 (GRCm38)	missense	probably damaging	0.99
R4134:Hspg2	UTSW	4	137,556,657 (GRCm38)	missense	probably damaging	0.99
R4272:Hspg2	UTSW	4	137,518,940 (GRCm38)	missense	probably damaging	1.00
R4273:Hspg2	UTSW	4	137,518,940 (GRCm38)	missense	probably damaging	1.00
R4274:Hspg2	UTSW	4	137,518,940 (GRCm38)	missense	probably damaging	1.00
R4275:Hspg2	UTSW	4	137,518,940 (GRCm38)	missense	probably damaging	1.00
R4288:Hspg2	UTSW	4	137,518,940 (GRCm38)	missense	probably damaging	1.00
R4289:Hspg2	UTSW	4	137,518,940 (GRCm38)	missense	probably damaging	1.00
R4354:Hspg2	UTSW	4	137,468,911 (GRCm38)	missense	probably benign	0.17
R4355:Hspg2	UTSW	4	137,529,418 (GRCm38)	missense	probably damaging	0.98
R4400:Hspg2	UTSW	4	137,548,122 (GRCm38)	missense	probably benign	0.01
R4411:Hspg2	UTSW	4	137,562,224 (GRCm38)	missense	probably benign
R4421:Hspg2	UTSW	4	137,548,122 (GRCm38)	missense	probably benign	0.01
R4592:Hspg2	UTSW	4	137,518,940 (GRCm38)	missense	probably damaging	1.00
R4612:Hspg2	UTSW	4	137,539,575 (GRCm38)	missense	possibly damaging	0.80
R4612:Hspg2	UTSW	4	137,518,940 (GRCm38)	missense	probably damaging	1.00
R4619:Hspg2	UTSW	4	137,546,573 (GRCm38)	missense	probably damaging	1.00
R4658:Hspg2	UTSW	4	137,533,730 (GRCm38)	missense	probably damaging	1.00
R4667:Hspg2	UTSW	4	137,539,645 (GRCm38)	missense	possibly damaging	0.90
R4724:Hspg2	UTSW	4	137,522,127 (GRCm38)	missense	probably damaging	0.96
R4739:Hspg2	UTSW	4	137,570,073 (GRCm38)	unclassified	probably benign
R4793:Hspg2	UTSW	4	137,529,473 (GRCm38)	missense	possibly damaging	0.95
R4826:Hspg2	UTSW	4	137,565,395 (GRCm38)	missense	probably damaging	1.00
R4838:Hspg2	UTSW	4	137,541,666 (GRCm38)	missense	possibly damaging	0.53
R4896:Hspg2	UTSW	4	137,518,940 (GRCm38)	missense	probably damaging	1.00
R4926:Hspg2	UTSW	4	137,542,530 (GRCm38)	missense	probably damaging	1.00
R4939:Hspg2	UTSW	4	137,508,031 (GRCm38)	missense	probably damaging	1.00
R5032:Hspg2	UTSW	4	137,518,940 (GRCm38)	missense	probably damaging	1.00
R5033:Hspg2	UTSW	4	137,518,940 (GRCm38)	missense	probably damaging	1.00
R5071:Hspg2	UTSW	4	137,540,230 (GRCm38)	missense	probably damaging	1.00
R5072:Hspg2	UTSW	4	137,540,230 (GRCm38)	missense	probably damaging	1.00
R5114:Hspg2	UTSW	4	137,511,926 (GRCm38)	missense	probably damaging	1.00
R5177:Hspg2	UTSW	4	137,518,772 (GRCm38)	missense	probably damaging	1.00
R5223:Hspg2	UTSW	4	137,543,914 (GRCm38)	missense	probably damaging	1.00
R5433:Hspg2	UTSW	4	137,528,794 (GRCm38)	splice site	probably null
R5529:Hspg2	UTSW	4	137,551,828 (GRCm38)	missense	probably damaging	1.00
R5541:Hspg2	UTSW	4	137,542,825 (GRCm38)	missense	probably benign	0.17
R5541:Hspg2	UTSW	4	137,520,551 (GRCm38)	missense	probably damaging	1.00
R5546:Hspg2	UTSW	4	137,548,174 (GRCm38)	critical splice donor site	probably null
R5728:Hspg2	UTSW	4	137,542,766 (GRCm38)	missense	possibly damaging	0.95
R5764:Hspg2	UTSW	4	137,561,721 (GRCm38)	missense	probably damaging	1.00
R5920:Hspg2	UTSW	4	137,553,782 (GRCm38)	missense	probably damaging	1.00
R5934:Hspg2	UTSW	4	137,518,772 (GRCm38)	missense	probably damaging	1.00
R6074:Hspg2	UTSW	4	137,540,735 (GRCm38)	missense	probably benign
R6164:Hspg2	UTSW	4	137,514,655 (GRCm38)	missense	possibly damaging	0.89
R6175:Hspg2	UTSW	4	137,569,518 (GRCm38)	missense	probably damaging	1.00
R6217:Hspg2	UTSW	4	137,540,248 (GRCm38)	missense	probably damaging	0.99
R6262:Hspg2	UTSW	4	137,519,686 (GRCm38)	missense	probably damaging	1.00
R6299:Hspg2	UTSW	4	137,544,705 (GRCm38)	missense	probably damaging	1.00
R6333:Hspg2	UTSW	4	137,561,955 (GRCm38)	missense	probably damaging	1.00
R6371:Hspg2	UTSW	4	137,541,695 (GRCm38)	missense	probably damaging	1.00
R6430:Hspg2	UTSW	4	137,539,396 (GRCm38)	missense	probably damaging	1.00
R6498:Hspg2	UTSW	4	137,507,801 (GRCm38)	missense	possibly damaging	0.46
R6522:Hspg2	UTSW	4	137,555,275 (GRCm38)	missense	probably damaging	1.00
R6680:Hspg2	UTSW	4	137,565,737 (GRCm38)	missense	probably benign	0.18
R6724:Hspg2	UTSW	4	137,515,307 (GRCm38)	missense	probably damaging	1.00
R6725:Hspg2	UTSW	4	137,515,307 (GRCm38)	missense	probably damaging	1.00
R6762:Hspg2	UTSW	4	137,551,803 (GRCm38)	missense	possibly damaging	0.83
R6785:Hspg2	UTSW	4	137,508,398 (GRCm38)	missense	probably damaging	0.99
R6788:Hspg2	UTSW	4	137,515,307 (GRCm38)	missense	probably damaging	1.00
R6931:Hspg2	UTSW	4	137,540,720 (GRCm38)	missense	probably damaging	1.00
R6959:Hspg2	UTSW	4	137,519,289 (GRCm38)	missense	probably benign	0.45
R6968:Hspg2	UTSW	4	137,535,156 (GRCm38)	missense	probably damaging	1.00
R6988:Hspg2	UTSW	4	137,528,890 (GRCm38)	missense	probably damaging	1.00
R7021:Hspg2	UTSW	4	137,542,269 (GRCm38)	missense	possibly damaging	0.69
R7089:Hspg2	UTSW	4	137,544,366 (GRCm38)	missense	possibly damaging	0.51
R7107:Hspg2	UTSW	4	137,510,652 (GRCm38)	missense	probably damaging	1.00
R7141:Hspg2	UTSW	4	137,552,116 (GRCm38)	missense	probably damaging	1.00
R7161:Hspg2	UTSW	4	137,514,719 (GRCm38)	missense	probably damaging	1.00
R7189:Hspg2	UTSW	4	137,533,561 (GRCm38)	critical splice donor site	probably null
R7238:Hspg2	UTSW	4	137,508,393 (GRCm38)	missense	probably damaging	1.00
R7253:Hspg2	UTSW	4	137,519,946 (GRCm38)	missense	probably benign	0.15
R7278:Hspg2	UTSW	4	137,551,125 (GRCm38)	missense	probably damaging	0.98
R7287:Hspg2	UTSW	4	137,529,556 (GRCm38)	missense	probably benign	0.00
R7390:Hspg2	UTSW	4	137,539,179 (GRCm38)	missense	probably damaging	1.00
R7436:Hspg2	UTSW	4	137,515,664 (GRCm38)	missense	probably damaging	0.99
R7479:Hspg2	UTSW	4	137,539,403 (GRCm38)	missense	probably benign	0.17
R7516:Hspg2	UTSW	4	137,542,620 (GRCm38)	missense	possibly damaging	0.94
R7540:Hspg2	UTSW	4	137,541,440 (GRCm38)	missense	possibly damaging	0.51
R7603:Hspg2	UTSW	4	137,557,192 (GRCm38)	missense	possibly damaging	0.91
R7603:Hspg2	UTSW	4	137,548,368 (GRCm38)	missense	probably damaging	1.00
R7625:Hspg2	UTSW	4	137,564,938 (GRCm38)	missense	probably damaging	1.00
R7696:Hspg2	UTSW	4	137,511,966 (GRCm38)	missense	possibly damaging	0.78
R7767:Hspg2	UTSW	4	137,511,866 (GRCm38)	missense	probably damaging	1.00
R7815:Hspg2	UTSW	4	137,512,464 (GRCm38)	missense	probably damaging	1.00
R7825:Hspg2	UTSW	4	137,558,849 (GRCm38)	missense	probably damaging	1.00
R7863:Hspg2	UTSW	4	137,564,824 (GRCm38)	missense	probably benign	0.03
R7885:Hspg2	UTSW	4	137,516,837 (GRCm38)	missense	probably damaging	1.00
R7899:Hspg2	UTSW	4	137,548,116 (GRCm38)	missense	possibly damaging	0.72
R7937:Hspg2	UTSW	4	137,550,932 (GRCm38)	missense	probably benign	0.01
R7975:Hspg2	UTSW	4	137,555,221 (GRCm38)	missense	probably benign	0.26
R8078:Hspg2	UTSW	4	137,508,022 (GRCm38)	missense	probably damaging	1.00
R8285:Hspg2	UTSW	4	137,512,663 (GRCm38)	missense	probably benign	0.18
R8314:Hspg2	UTSW	4	137,539,675 (GRCm38)	missense	probably benign	0.12
R8322:Hspg2	UTSW	4	137,518,979 (GRCm38)	missense	possibly damaging	0.88
R8323:Hspg2	UTSW	4	137,518,979 (GRCm38)	missense	possibly damaging	0.88
R8324:Hspg2	UTSW	4	137,518,979 (GRCm38)	missense	possibly damaging	0.88
R8341:Hspg2	UTSW	4	137,518,979 (GRCm38)	missense	possibly damaging	0.88
R8383:Hspg2	UTSW	4	137,544,370 (GRCm38)	missense	possibly damaging	0.66
R8425:Hspg2	UTSW	4	137,550,867 (GRCm38)	nonsense	probably null
R8491:Hspg2	UTSW	4	137,553,719 (GRCm38)	missense	probably benign	0.00
R8525:Hspg2	UTSW	4	137,539,448 (GRCm38)	missense	probably damaging	0.98
R8978:Hspg2	UTSW	4	137,564,030 (GRCm38)	missense	probably benign	0.09
R9152:Hspg2	UTSW	4	137,522,565 (GRCm38)	missense	possibly damaging	0.89
R9166:Hspg2	UTSW	4	137,542,874 (GRCm38)	missense	probably damaging	1.00
R9175:Hspg2	UTSW	4	137,529,346 (GRCm38)	missense	probably damaging	0.98
R9210:Hspg2	UTSW	4	137,562,479 (GRCm38)	missense	probably benign	0.05
R9221:Hspg2	UTSW	4	137,560,415 (GRCm38)	missense	possibly damaging	0.79
R9325:Hspg2	UTSW	4	137,538,241 (GRCm38)	missense	probably damaging	1.00
R9339:Hspg2	UTSW	4	137,551,169 (GRCm38)	missense	probably benign
R9340:Hspg2	UTSW	4	137,569,516 (GRCm38)	missense	probably damaging	1.00
R9358:Hspg2	UTSW	4	137,517,598 (GRCm38)	missense	probably damaging	1.00
R9451:Hspg2	UTSW	4	137,511,069 (GRCm38)	missense	probably damaging	1.00
R9534:Hspg2	UTSW	4	137,540,761 (GRCm38)	missense	probably benign
R9656:Hspg2	UTSW	4	137,551,885 (GRCm38)	missense	probably benign
R9664:Hspg2	UTSW	4	137,539,576 (GRCm38)	missense	probably benign	0.03
R9695:Hspg2	UTSW	4	137,538,390 (GRCm38)	missense	probably damaging	1.00
R9741:Hspg2	UTSW	4	137,512,651 (GRCm38)	missense	probably damaging	1.00
V5622:Hspg2	UTSW	4	137,533,738 (GRCm38)	missense	probably damaging	0.99
V5622:Hspg2	UTSW	4	137,533,738 (GRCm38)	missense	probably damaging	0.99
X0028:Hspg2	UTSW	4	137,550,391 (GRCm38)	missense	probably benign
Z1177:Hspg2	UTSW	4	137,568,373 (GRCm38)	missense	possibly damaging	0.64
Z1177:Hspg2	UTSW	4	137,564,518 (GRCm38)	missense	probably damaging	0.99
Z1177:Hspg2	UTSW	4	137,550,467 (GRCm38)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GCCTGACTTCCCAGATACTC -3'
(R):5'- GACATGGTTCATGCAGCTGG -3'

Sequencing Primer
(F):5'- ACACCCCATGAGTCCCTTGG -3'
(R):5'- TGGCACGGGTTCTCCTCATG -3'

Posted On

2014-06-30