Incidental Mutation 'R0125:Rapgef6'
ID |
21308 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Rapgef6
|
Ensembl Gene |
ENSMUSG00000037533 |
Gene Name |
Rap guanine nucleotide exchange factor (GEF) 6 |
Synonyms |
PDZ-GEF2, C030018K18Rik, Pdzgef2, RA-GEF-2 |
MMRRC Submission |
038410-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R0125 (G1)
|
Quality Score |
203 |
Status
|
Validated
(trace)
|
Chromosome |
11 |
Chromosomal Location |
54413673-54590111 bp(+) (GRCm39) |
Type of Mutation |
nonsense |
DNA Base Change (assembly) |
T to A
at 54516701 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Tyrosine to Stop codon
at position 172
(Y172*)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000151509
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000094536]
[ENSMUST00000101206]
[ENSMUST00000102743]
[ENSMUST00000108894]
[ENSMUST00000108895]
[ENSMUST00000207429]
[ENSMUST00000218995]
|
AlphaFold |
Q5NCJ1 |
Predicted Effect |
probably null
Transcript: ENSMUST00000094536
AA Change: Y34*
|
SMART Domains |
Protein: ENSMUSP00000092114 Gene: ENSMUSG00000037533 AA Change: Y34*
Domain | Start | End | E-Value | Type |
cNMP
|
1 |
113 |
6.64e-7 |
SMART |
RasGEFN
|
127 |
240 |
4.35e-33 |
SMART |
PDZ
|
255 |
327 |
8.86e-16 |
SMART |
low complexity region
|
409 |
420 |
N/A |
INTRINSIC |
RA
|
464 |
550 |
1.47e-20 |
SMART |
RasGEF
|
571 |
853 |
3.88e-84 |
SMART |
low complexity region
|
944 |
957 |
N/A |
INTRINSIC |
low complexity region
|
972 |
989 |
N/A |
INTRINSIC |
low complexity region
|
1016 |
1061 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000101206
AA Change: Y319*
|
SMART Domains |
Protein: ENSMUSP00000098766 Gene: ENSMUSG00000037533 AA Change: Y319*
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
10 |
82 |
1.45e-5 |
PROSPERO |
low complexity region
|
187 |
205 |
N/A |
INTRINSIC |
low complexity region
|
231 |
239 |
N/A |
INTRINSIC |
cNMP
|
280 |
398 |
4.8e-13 |
SMART |
RasGEFN
|
412 |
525 |
4.35e-33 |
SMART |
PDZ
|
540 |
612 |
8.86e-16 |
SMART |
low complexity region
|
694 |
705 |
N/A |
INTRINSIC |
RA
|
749 |
835 |
1.47e-20 |
SMART |
RasGEF
|
856 |
1095 |
5.35e-87 |
SMART |
low complexity region
|
1237 |
1250 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1293 |
N/A |
INTRINSIC |
low complexity region
|
1345 |
1364 |
N/A |
INTRINSIC |
low complexity region
|
1368 |
1380 |
N/A |
INTRINSIC |
low complexity region
|
1444 |
1452 |
N/A |
INTRINSIC |
low complexity region
|
1555 |
1568 |
N/A |
INTRINSIC |
low complexity region
|
1591 |
1604 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000102743
AA Change: Y319*
|
SMART Domains |
Protein: ENSMUSP00000099804 Gene: ENSMUSG00000037533 AA Change: Y319*
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
10 |
82 |
1.42e-5 |
PROSPERO |
low complexity region
|
187 |
205 |
N/A |
INTRINSIC |
low complexity region
|
231 |
239 |
N/A |
INTRINSIC |
cNMP
|
280 |
398 |
4.8e-13 |
SMART |
RasGEFN
|
412 |
525 |
4.35e-33 |
SMART |
PDZ
|
540 |
612 |
8.86e-16 |
SMART |
low complexity region
|
694 |
705 |
N/A |
INTRINSIC |
RA
|
749 |
835 |
1.47e-20 |
SMART |
RasGEF
|
856 |
1138 |
3.88e-84 |
SMART |
low complexity region
|
1229 |
1242 |
N/A |
INTRINSIC |
low complexity region
|
1262 |
1285 |
N/A |
INTRINSIC |
low complexity region
|
1337 |
1356 |
N/A |
INTRINSIC |
low complexity region
|
1360 |
1372 |
N/A |
INTRINSIC |
low complexity region
|
1436 |
1444 |
N/A |
INTRINSIC |
low complexity region
|
1547 |
1560 |
N/A |
INTRINSIC |
low complexity region
|
1583 |
1596 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000108894
AA Change: Y34*
|
SMART Domains |
Protein: ENSMUSP00000104522 Gene: ENSMUSG00000037533 AA Change: Y34*
Domain | Start | End | E-Value | Type |
cNMP
|
1 |
113 |
6.64e-7 |
SMART |
RasGEFN
|
127 |
240 |
4.35e-33 |
SMART |
PDZ
|
255 |
327 |
8.86e-16 |
SMART |
low complexity region
|
409 |
420 |
N/A |
INTRINSIC |
RA
|
464 |
550 |
1.47e-20 |
SMART |
RasGEF
|
571 |
810 |
5.35e-87 |
SMART |
low complexity region
|
952 |
965 |
N/A |
INTRINSIC |
low complexity region
|
980 |
997 |
N/A |
INTRINSIC |
low complexity region
|
1024 |
1069 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000108895
AA Change: Y319*
|
SMART Domains |
Protein: ENSMUSP00000104523 Gene: ENSMUSG00000037533 AA Change: Y319*
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
10 |
82 |
1.95e-5 |
PROSPERO |
low complexity region
|
187 |
205 |
N/A |
INTRINSIC |
low complexity region
|
231 |
239 |
N/A |
INTRINSIC |
cNMP
|
280 |
398 |
4.8e-13 |
SMART |
RasGEFN
|
412 |
526 |
1.03e-25 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000149372
|
Predicted Effect |
probably null
Transcript: ENSMUST00000207429
AA Change: Y319*
|
Predicted Effect |
probably null
Transcript: ENSMUST00000218995
AA Change: Y172*
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000220269
|
Meta Mutation Damage Score |
0.9755 |
Coding Region Coverage |
- 1x: 98.9%
- 3x: 97.9%
- 10x: 94.7%
- 20x: 87.1%
|
Validation Efficiency |
98% (96/98) |
MGI Phenotype |
PHENOTYPE: Mice homozygous for a null allele exhibit an inlarged spleen, increased IgE and IgG levels and altered cytokine production. [provided by MGI curators]
|
Allele List at MGI |
All alleles(16) : Targeted, knock-out(1) Targeted, other(2) Gene trapped(13) |
Other mutations in this stock |
Total: 89 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
9930012K11Rik |
T |
C |
14: 70,394,096 (GRCm39) |
|
probably benign |
Het |
Adam23 |
T |
C |
1: 63,573,515 (GRCm39) |
L261P |
probably benign |
Het |
Adgra3 |
G |
A |
5: 50,159,194 (GRCm39) |
|
probably benign |
Het |
Agtr1b |
A |
G |
3: 20,369,704 (GRCm39) |
F301L |
probably benign |
Het |
Ahnak2 |
G |
A |
12: 112,748,776 (GRCm39) |
T357I |
probably benign |
Het |
Aldh1a7 |
T |
C |
19: 20,704,430 (GRCm39) |
|
probably benign |
Het |
Apoh |
A |
T |
11: 108,302,899 (GRCm39) |
N288I |
probably damaging |
Het |
Arfgap3 |
A |
G |
15: 83,227,340 (GRCm39) |
V24A |
probably benign |
Het |
Atp6v0a1 |
A |
G |
11: 100,929,677 (GRCm39) |
|
probably null |
Het |
Axl |
A |
T |
7: 25,486,368 (GRCm39) |
M112K |
probably benign |
Het |
Bnc2 |
A |
C |
4: 84,211,169 (GRCm39) |
I425S |
probably damaging |
Het |
Ccn4 |
T |
C |
15: 66,789,194 (GRCm39) |
S227P |
possibly damaging |
Het |
Cdc42bpa |
C |
T |
1: 179,788,763 (GRCm39) |
T30M |
probably damaging |
Het |
Cebpz |
C |
A |
17: 79,227,317 (GRCm39) |
R1051M |
possibly damaging |
Het |
Ces1d |
A |
C |
8: 93,901,810 (GRCm39) |
|
probably benign |
Het |
Chd1l |
T |
C |
3: 97,494,465 (GRCm39) |
N405S |
probably benign |
Het |
Chodl |
G |
T |
16: 78,738,311 (GRCm39) |
G93V |
probably damaging |
Het |
Cpeb2 |
C |
T |
5: 43,395,743 (GRCm39) |
|
probably benign |
Het |
Crebbp |
A |
G |
16: 3,935,105 (GRCm39) |
|
probably benign |
Het |
Crybb3 |
T |
C |
5: 113,227,675 (GRCm39) |
T49A |
possibly damaging |
Het |
Ctps1 |
A |
G |
4: 120,418,722 (GRCm39) |
|
probably benign |
Het |
Cyp26b1 |
A |
G |
6: 84,551,497 (GRCm39) |
Y240H |
probably damaging |
Het |
Cyp2d11 |
A |
C |
15: 82,273,422 (GRCm39) |
V483G |
probably benign |
Het |
Dennd2b |
T |
C |
7: 109,155,545 (GRCm39) |
K402E |
probably benign |
Het |
Dnah14 |
A |
T |
1: 181,579,628 (GRCm39) |
N3054Y |
probably damaging |
Het |
Dspp |
A |
C |
5: 104,325,905 (GRCm39) |
D756A |
unknown |
Het |
Dst |
T |
C |
1: 34,309,984 (GRCm39) |
S1553P |
probably damaging |
Het |
Elp4 |
A |
G |
2: 105,622,559 (GRCm39) |
|
probably null |
Het |
Eml6 |
G |
T |
11: 29,832,088 (GRCm39) |
T194K |
probably benign |
Het |
Evi5 |
A |
G |
5: 107,943,638 (GRCm39) |
I569T |
probably benign |
Het |
Fancm |
C |
T |
12: 65,168,730 (GRCm39) |
P1698S |
possibly damaging |
Het |
Fhdc1 |
T |
C |
3: 84,352,852 (GRCm39) |
D791G |
probably benign |
Het |
Frem1 |
A |
G |
4: 82,930,188 (GRCm39) |
Y253H |
probably damaging |
Het |
Gpn3 |
A |
G |
5: 122,519,481 (GRCm39) |
Y196C |
probably benign |
Het |
Hcls1 |
A |
G |
16: 36,782,525 (GRCm39) |
D398G |
probably benign |
Het |
Hydin |
T |
C |
8: 111,189,163 (GRCm39) |
V1189A |
probably benign |
Het |
Itgb3 |
G |
A |
11: 104,534,789 (GRCm39) |
D549N |
probably damaging |
Het |
Itpr2 |
A |
G |
6: 146,141,951 (GRCm39) |
F1697S |
probably benign |
Het |
Klk1b11 |
A |
G |
7: 43,648,475 (GRCm39) |
T161A |
probably benign |
Het |
Kntc1 |
G |
A |
5: 123,903,120 (GRCm39) |
|
probably benign |
Het |
Map3k19 |
A |
T |
1: 127,750,837 (GRCm39) |
F838Y |
probably benign |
Het |
Map6 |
T |
A |
7: 98,985,187 (GRCm39) |
|
probably null |
Het |
Mcrs1 |
A |
G |
15: 99,142,608 (GRCm39) |
|
probably benign |
Het |
Mdn1 |
A |
T |
4: 32,729,956 (GRCm39) |
Y2766F |
probably damaging |
Het |
Med23 |
C |
T |
10: 24,776,686 (GRCm39) |
H739Y |
probably damaging |
Het |
Mmp17 |
T |
A |
5: 129,671,646 (GRCm39) |
D65E |
possibly damaging |
Het |
Mmp9 |
T |
A |
2: 164,793,177 (GRCm39) |
L442Q |
probably damaging |
Het |
Myo19 |
T |
C |
11: 84,779,001 (GRCm39) |
|
probably benign |
Het |
Nedd1 |
A |
C |
10: 92,527,791 (GRCm39) |
S468A |
possibly damaging |
Het |
Niban2 |
T |
A |
2: 32,813,833 (GRCm39) |
V682D |
probably benign |
Het |
Nlrp4d |
A |
C |
7: 10,116,316 (GRCm39) |
V152G |
probably damaging |
Het |
Nxf1 |
T |
A |
19: 8,740,170 (GRCm39) |
D112E |
probably benign |
Het |
Oas1h |
A |
T |
5: 121,000,626 (GRCm39) |
K79* |
probably null |
Het |
Omg |
T |
A |
11: 79,393,679 (GRCm39) |
I60F |
possibly damaging |
Het |
Or5p69 |
A |
G |
7: 107,967,576 (GRCm39) |
Y293C |
probably damaging |
Het |
Or8b101 |
A |
G |
9: 38,020,815 (GRCm39) |
T278A |
probably benign |
Het |
Or8b1b |
T |
A |
9: 38,375,757 (GRCm39) |
L140* |
probably null |
Het |
Pck1 |
G |
A |
2: 172,997,874 (GRCm39) |
W314* |
probably null |
Het |
Pla2g15 |
T |
C |
8: 106,889,756 (GRCm39) |
Y343H |
probably benign |
Het |
Plcb3 |
T |
C |
19: 6,936,276 (GRCm39) |
E749G |
probably damaging |
Het |
Plgrkt |
A |
G |
19: 29,328,442 (GRCm39) |
|
probably null |
Het |
Pprc1 |
A |
G |
19: 46,057,951 (GRCm39) |
|
probably benign |
Het |
Prkdc |
A |
T |
16: 15,516,871 (GRCm39) |
I1082F |
probably damaging |
Het |
Ros1 |
G |
T |
10: 52,001,885 (GRCm39) |
A1079D |
probably benign |
Het |
Sap30 |
T |
C |
8: 57,938,545 (GRCm39) |
E147G |
probably null |
Het |
Sell |
T |
C |
1: 163,899,674 (GRCm39) |
|
probably benign |
Het |
Senp1 |
A |
T |
15: 97,946,112 (GRCm39) |
D544E |
probably damaging |
Het |
Shpk |
G |
A |
11: 73,105,048 (GRCm39) |
|
probably benign |
Het |
Slc35b1 |
A |
T |
11: 95,277,353 (GRCm39) |
T74S |
probably benign |
Het |
Slc6a3 |
T |
A |
13: 73,718,098 (GRCm39) |
|
probably benign |
Het |
Slf1 |
T |
C |
13: 77,191,864 (GRCm39) |
N990S |
probably benign |
Het |
Smgc |
A |
G |
15: 91,738,746 (GRCm39) |
|
probably benign |
Het |
Snx19 |
T |
A |
9: 30,351,515 (GRCm39) |
V861D |
probably damaging |
Het |
Sprr2e |
C |
T |
3: 92,260,285 (GRCm39) |
P39S |
unknown |
Het |
Sstr2 |
T |
A |
11: 113,515,303 (GRCm39) |
M74K |
probably damaging |
Het |
Svep1 |
T |
C |
4: 58,099,937 (GRCm39) |
|
probably benign |
Het |
Tas2r143 |
A |
G |
6: 42,377,889 (GRCm39) |
I240V |
probably benign |
Het |
Tbrg1 |
T |
C |
9: 37,563,937 (GRCm39) |
I233V |
probably benign |
Het |
Tecpr1 |
G |
T |
5: 144,134,717 (GRCm39) |
D1055E |
probably damaging |
Het |
Thap2 |
A |
T |
10: 115,212,277 (GRCm39) |
|
probably null |
Het |
Tinagl1 |
A |
G |
4: 130,060,101 (GRCm39) |
Y388H |
probably damaging |
Het |
Ttn |
T |
A |
2: 76,585,896 (GRCm39) |
Y21945F |
probably damaging |
Het |
Ugt2b1 |
A |
T |
5: 87,073,961 (GRCm39) |
W133R |
probably benign |
Het |
Usp24 |
C |
T |
4: 106,254,496 (GRCm39) |
P1491L |
possibly damaging |
Het |
Utp15 |
A |
G |
13: 98,387,390 (GRCm39) |
S395P |
possibly damaging |
Het |
Vav1 |
T |
A |
17: 57,606,847 (GRCm39) |
L254Q |
probably damaging |
Het |
Vmn2r104 |
T |
C |
17: 20,250,069 (GRCm39) |
Y734C |
probably damaging |
Het |
Vps8 |
T |
A |
16: 21,288,904 (GRCm39) |
V421E |
probably benign |
Het |
Xkr7 |
G |
T |
2: 152,874,346 (GRCm39) |
A138S |
probably benign |
Het |
|
Other mutations in Rapgef6 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00436:Rapgef6
|
APN |
11 |
54,570,091 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00507:Rapgef6
|
APN |
11 |
54,554,935 (GRCm39) |
nonsense |
probably null |
|
IGL00809:Rapgef6
|
APN |
11 |
54,540,126 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00843:Rapgef6
|
APN |
11 |
54,582,099 (GRCm39) |
missense |
probably benign |
0.03 |
IGL00899:Rapgef6
|
APN |
11 |
54,510,844 (GRCm39) |
nonsense |
probably null |
|
IGL01372:Rapgef6
|
APN |
11 |
54,559,437 (GRCm39) |
splice site |
probably benign |
|
IGL01604:Rapgef6
|
APN |
11 |
54,585,389 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01935:Rapgef6
|
APN |
11 |
54,501,668 (GRCm39) |
missense |
possibly damaging |
0.78 |
IGL01991:Rapgef6
|
APN |
11 |
54,443,695 (GRCm39) |
missense |
probably benign |
0.37 |
IGL02243:Rapgef6
|
APN |
11 |
54,567,226 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02407:Rapgef6
|
APN |
11 |
54,567,181 (GRCm39) |
missense |
possibly damaging |
0.91 |
IGL02676:Rapgef6
|
APN |
11 |
54,540,172 (GRCm39) |
unclassified |
probably benign |
|
IGL02934:Rapgef6
|
APN |
11 |
54,516,690 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03076:Rapgef6
|
APN |
11 |
54,516,793 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03110:Rapgef6
|
APN |
11 |
54,586,915 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL03256:Rapgef6
|
APN |
11 |
54,548,255 (GRCm39) |
missense |
probably damaging |
1.00 |
shocker
|
UTSW |
11 |
54,510,842 (GRCm39) |
missense |
probably damaging |
1.00 |
D4216:Rapgef6
|
UTSW |
11 |
54,559,572 (GRCm39) |
splice site |
probably benign |
|
PIT4305001:Rapgef6
|
UTSW |
11 |
54,570,203 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4366001:Rapgef6
|
UTSW |
11 |
54,582,446 (GRCm39) |
missense |
probably damaging |
0.98 |
R0047:Rapgef6
|
UTSW |
11 |
54,437,204 (GRCm39) |
missense |
possibly damaging |
0.65 |
R0047:Rapgef6
|
UTSW |
11 |
54,437,204 (GRCm39) |
missense |
possibly damaging |
0.65 |
R0189:Rapgef6
|
UTSW |
11 |
54,582,075 (GRCm39) |
missense |
probably benign |
|
R0201:Rapgef6
|
UTSW |
11 |
54,510,767 (GRCm39) |
missense |
probably damaging |
1.00 |
R0505:Rapgef6
|
UTSW |
11 |
54,516,789 (GRCm39) |
missense |
probably benign |
0.00 |
R0524:Rapgef6
|
UTSW |
11 |
54,581,110 (GRCm39) |
missense |
probably benign |
0.32 |
R0853:Rapgef6
|
UTSW |
11 |
54,559,503 (GRCm39) |
missense |
probably damaging |
1.00 |
R1203:Rapgef6
|
UTSW |
11 |
54,582,525 (GRCm39) |
missense |
probably benign |
0.09 |
R1440:Rapgef6
|
UTSW |
11 |
54,517,534 (GRCm39) |
missense |
probably damaging |
1.00 |
R1453:Rapgef6
|
UTSW |
11 |
54,530,553 (GRCm39) |
splice site |
probably null |
|
R1530:Rapgef6
|
UTSW |
11 |
54,552,009 (GRCm39) |
missense |
probably damaging |
1.00 |
R1593:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1620:Rapgef6
|
UTSW |
11 |
54,517,420 (GRCm39) |
missense |
possibly damaging |
0.88 |
R1628:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1629:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1630:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1634:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1640:Rapgef6
|
UTSW |
11 |
54,548,231 (GRCm39) |
missense |
probably damaging |
1.00 |
R1686:Rapgef6
|
UTSW |
11 |
54,582,458 (GRCm39) |
missense |
possibly damaging |
0.81 |
R1722:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1743:Rapgef6
|
UTSW |
11 |
54,567,110 (GRCm39) |
missense |
probably damaging |
1.00 |
R1816:Rapgef6
|
UTSW |
11 |
54,585,314 (GRCm39) |
missense |
probably benign |
|
R1851:Rapgef6
|
UTSW |
11 |
54,533,637 (GRCm39) |
missense |
probably benign |
0.01 |
R1852:Rapgef6
|
UTSW |
11 |
54,533,637 (GRCm39) |
missense |
probably benign |
0.01 |
R1868:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1888:Rapgef6
|
UTSW |
11 |
54,551,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R1888:Rapgef6
|
UTSW |
11 |
54,551,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R1942:Rapgef6
|
UTSW |
11 |
54,548,089 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1943:Rapgef6
|
UTSW |
11 |
54,548,089 (GRCm39) |
missense |
possibly damaging |
0.95 |
R2031:Rapgef6
|
UTSW |
11 |
54,443,684 (GRCm39) |
missense |
probably benign |
0.30 |
R2087:Rapgef6
|
UTSW |
11 |
54,522,075 (GRCm39) |
missense |
probably damaging |
1.00 |
R2106:Rapgef6
|
UTSW |
11 |
54,559,512 (GRCm39) |
missense |
probably benign |
0.17 |
R2362:Rapgef6
|
UTSW |
11 |
54,585,098 (GRCm39) |
missense |
probably damaging |
1.00 |
R2484:Rapgef6
|
UTSW |
11 |
54,533,582 (GRCm39) |
missense |
possibly damaging |
0.48 |
R2566:Rapgef6
|
UTSW |
11 |
54,578,537 (GRCm39) |
missense |
possibly damaging |
0.66 |
R2872:Rapgef6
|
UTSW |
11 |
54,552,001 (GRCm39) |
missense |
probably damaging |
1.00 |
R2872:Rapgef6
|
UTSW |
11 |
54,552,001 (GRCm39) |
missense |
probably damaging |
1.00 |
R3744:Rapgef6
|
UTSW |
11 |
54,516,760 (GRCm39) |
missense |
probably benign |
0.40 |
R3848:Rapgef6
|
UTSW |
11 |
54,582,134 (GRCm39) |
missense |
probably damaging |
0.97 |
R4823:Rapgef6
|
UTSW |
11 |
54,585,326 (GRCm39) |
missense |
probably benign |
0.08 |
R4859:Rapgef6
|
UTSW |
11 |
54,526,989 (GRCm39) |
missense |
probably benign |
|
R4906:Rapgef6
|
UTSW |
11 |
54,443,662 (GRCm39) |
missense |
probably damaging |
1.00 |
R4911:Rapgef6
|
UTSW |
11 |
54,513,143 (GRCm39) |
missense |
probably damaging |
0.97 |
R4937:Rapgef6
|
UTSW |
11 |
54,548,143 (GRCm39) |
missense |
probably damaging |
1.00 |
R5033:Rapgef6
|
UTSW |
11 |
54,582,207 (GRCm39) |
missense |
possibly damaging |
0.92 |
R5249:Rapgef6
|
UTSW |
11 |
54,413,943 (GRCm39) |
missense |
probably benign |
0.19 |
R5304:Rapgef6
|
UTSW |
11 |
54,548,200 (GRCm39) |
missense |
probably benign |
0.01 |
R5656:Rapgef6
|
UTSW |
11 |
54,526,962 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5701:Rapgef6
|
UTSW |
11 |
54,567,220 (GRCm39) |
missense |
possibly damaging |
0.76 |
R5758:Rapgef6
|
UTSW |
11 |
54,559,470 (GRCm39) |
missense |
probably damaging |
1.00 |
R5973:Rapgef6
|
UTSW |
11 |
54,530,609 (GRCm39) |
missense |
probably damaging |
1.00 |
R6177:Rapgef6
|
UTSW |
11 |
54,510,842 (GRCm39) |
missense |
probably damaging |
1.00 |
R6268:Rapgef6
|
UTSW |
11 |
54,540,073 (GRCm39) |
missense |
probably damaging |
1.00 |
R6287:Rapgef6
|
UTSW |
11 |
54,517,164 (GRCm39) |
splice site |
probably null |
|
R6293:Rapgef6
|
UTSW |
11 |
54,525,607 (GRCm39) |
missense |
probably damaging |
1.00 |
R6471:Rapgef6
|
UTSW |
11 |
54,582,563 (GRCm39) |
missense |
probably damaging |
0.99 |
R6863:Rapgef6
|
UTSW |
11 |
54,437,206 (GRCm39) |
missense |
probably benign |
0.00 |
R6950:Rapgef6
|
UTSW |
11 |
54,567,206 (GRCm39) |
missense |
probably benign |
0.09 |
R7144:Rapgef6
|
UTSW |
11 |
54,548,191 (GRCm39) |
missense |
possibly damaging |
0.78 |
R7171:Rapgef6
|
UTSW |
11 |
54,567,189 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7199:Rapgef6
|
UTSW |
11 |
54,437,252 (GRCm39) |
missense |
probably benign |
0.00 |
R7291:Rapgef6
|
UTSW |
11 |
54,582,065 (GRCm39) |
missense |
probably benign |
0.05 |
R7436:Rapgef6
|
UTSW |
11 |
54,501,747 (GRCm39) |
critical splice donor site |
probably null |
|
R7498:Rapgef6
|
UTSW |
11 |
54,510,830 (GRCm39) |
missense |
probably damaging |
1.00 |
R7506:Rapgef6
|
UTSW |
11 |
54,526,997 (GRCm39) |
missense |
probably benign |
0.00 |
R7527:Rapgef6
|
UTSW |
11 |
54,525,787 (GRCm39) |
missense |
unknown |
|
R7646:Rapgef6
|
UTSW |
11 |
54,516,780 (GRCm39) |
missense |
probably benign |
0.00 |
R7655:Rapgef6
|
UTSW |
11 |
54,585,279 (GRCm39) |
missense |
probably benign |
0.10 |
R7656:Rapgef6
|
UTSW |
11 |
54,585,279 (GRCm39) |
missense |
probably benign |
0.10 |
R7687:Rapgef6
|
UTSW |
11 |
54,551,901 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7768:Rapgef6
|
UTSW |
11 |
54,517,414 (GRCm39) |
missense |
probably damaging |
1.00 |
R7788:Rapgef6
|
UTSW |
11 |
54,585,225 (GRCm39) |
missense |
probably damaging |
1.00 |
R7890:Rapgef6
|
UTSW |
11 |
54,517,549 (GRCm39) |
missense |
probably damaging |
1.00 |
R8113:Rapgef6
|
UTSW |
11 |
54,516,784 (GRCm39) |
missense |
probably benign |
0.03 |
R8337:Rapgef6
|
UTSW |
11 |
54,522,127 (GRCm39) |
nonsense |
probably null |
|
R8393:Rapgef6
|
UTSW |
11 |
54,578,487 (GRCm39) |
missense |
probably benign |
|
R8465:Rapgef6
|
UTSW |
11 |
54,582,308 (GRCm39) |
missense |
probably benign |
0.00 |
R8492:Rapgef6
|
UTSW |
11 |
54,581,063 (GRCm39) |
missense |
probably damaging |
0.99 |
R8791:Rapgef6
|
UTSW |
11 |
54,459,295 (GRCm39) |
missense |
probably benign |
0.15 |
R8866:Rapgef6
|
UTSW |
11 |
54,443,700 (GRCm39) |
critical splice donor site |
probably null |
|
R8917:Rapgef6
|
UTSW |
11 |
54,582,392 (GRCm39) |
nonsense |
probably null |
|
R8921:Rapgef6
|
UTSW |
11 |
54,570,065 (GRCm39) |
missense |
probably benign |
0.09 |
R9031:Rapgef6
|
UTSW |
11 |
54,578,667 (GRCm39) |
missense |
probably benign |
0.00 |
R9093:Rapgef6
|
UTSW |
11 |
54,487,912 (GRCm39) |
nonsense |
probably null |
|
R9354:Rapgef6
|
UTSW |
11 |
54,510,749 (GRCm39) |
missense |
possibly damaging |
0.66 |
R9514:Rapgef6
|
UTSW |
11 |
54,443,684 (GRCm39) |
missense |
probably benign |
0.14 |
R9516:Rapgef6
|
UTSW |
11 |
54,582,169 (GRCm39) |
missense |
probably damaging |
1.00 |
R9739:Rapgef6
|
UTSW |
11 |
54,513,189 (GRCm39) |
missense |
probably benign |
0.03 |
R9789:Rapgef6
|
UTSW |
11 |
54,540,097 (GRCm39) |
missense |
probably benign |
0.03 |
|
Predicted Primers |
PCR Primer
(F):5'- GTATTTTGCCTTAGAGAAAGTGGCCGA -3'
(R):5'- AGAGCAGGCGTACCTGACAATCATC -3'
Sequencing Primer
(F):5'- GAAAGTGGCCGATTATGAAATTCC -3'
(R):5'- GTACCTGACAATCATCGACTTTGG -3'
|
Posted On |
2013-04-11 |