Mutagenetix > Incidental Mutation

Incidental Mutation 'R1914:Dnajc2'

214667

Institutional Source

Beutler Lab

Gene Symbol

Dnajc2

Ensembl Gene

ENSMUSG00000029014

Gene Name

DnaJ heat shock protein family (Hsp40) member C2

Synonyms

Zrf1, Zrf2, MIDA1, Mida1

MMRRC Submission

039932-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.952) question?

Stock #

R1914 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

21962279-21990183 bp(-) (GRCm39)

Type of Mutation

critical splice donor site (2 bp from exon)

DNA Base Change (assembly)

A to G at 21986317 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000110849 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000030769] [ENSMUST00000030771] [ENSMUST00000115192] [ENSMUST00000115193] [ENSMUST00000115195]

AlphaFold

P54103

Predicted Effect

probably benign
Transcript: ENSMUST00000030769

SMART Domains

Protein: ENSMUSP00000030769
Gene: ENSMUSG00000028932

Domain	Start	End	E-Value	Type
low complexity region	114	125	N/A	INTRINSIC
AAA	250	389	2.74e-23	SMART

Predicted Effect

probably null
Transcript: ENSMUST00000030771

SMART Domains

Protein: ENSMUSP00000030771
Gene: ENSMUSG00000029014

Domain	Start	End	E-Value	Type
coiled coil region	39	67	N/A	INTRINSIC
DnaJ	87	153	2.16e-18	SMART
low complexity region	231	245	N/A	INTRINSIC
low complexity region	281	319	N/A	INTRINSIC
Pfam:RAC_head	339	430	2.8e-24	PFAM
SANT	450	509	6.64e-10	SMART
SANT	550	602	2.4e-16	SMART

Predicted Effect

probably null
Transcript: ENSMUST00000115192

SMART Domains

Protein: ENSMUSP00000110846
Gene: ENSMUSG00000029014

Domain	Start	End	E-Value	Type
coiled coil region	39	67	N/A	INTRINSIC
DnaJ	87	153	2.16e-18	SMART

Predicted Effect

probably null
Transcript: ENSMUST00000115193

SMART Domains

Protein: ENSMUSP00000110847
Gene: ENSMUSG00000029014

Domain	Start	End	E-Value	Type
coiled coil region	39	67	N/A	INTRINSIC
DnaJ	87	153	2.16e-18	SMART
coiled coil region	230	358	N/A	INTRINSIC
coiled coil region	404	445	N/A	INTRINSIC
SANT	450	509	6.64e-10	SMART
SANT	550	602	1.34e-14	SMART

Predicted Effect

probably null
Transcript: ENSMUST00000115195

SMART Domains

Protein: ENSMUSP00000110849
Gene: ENSMUSG00000029014

Domain	Start	End	E-Value	Type
DnaJ	13	79	2.16e-18	SMART
coiled coil region	156	284	N/A	INTRINSIC
coiled coil region	330	371	N/A	INTRINSIC
SANT	376	435	6.64e-10	SMART
SANT	476	528	2.4e-16	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000132962

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000147987

Meta Mutation Damage Score

0.9755

Coding Region Coverage

1x: 97.5%
3x: 96.9%
10x: 95.1%
20x: 91.6%

Validation Efficiency

99% (90/91)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is a member of the M-phase phosphoprotein (MPP) family. The gene encodes a phosphoprotein with a J domain and a Myb DNA-binding domain which localizes to both the nucleus and the cytosol. The protein is capable of forming a heterodimeric complex that associates with ribosomes, acting as a molecular chaperone for nascent polypeptide chains as they exit the ribosome. This protein was identified as a leukemia-associated antigen and expression of the gene is upregulated in leukemic blasts. Also, chromosomal aberrations involving this gene are associated with primary head and neck squamous cell tumors. This gene has a pseudogene on chromosome 6. Alternatively spliced variants which encode different protein isoforms have been described. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 87 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4833420G17Rik	T	A	13: 119,622,386 (GRCm39)	V618E	possibly damaging	Het
Abca6	T	C	11: 110,103,036 (GRCm39)	R852G	probably benign	Het
Akap12	G	A	10: 4,306,685 (GRCm39)	R1165H	probably benign	Het
Asxl1	T	C	2: 153,243,826 (GRCm39)	S1459P	probably damaging	Het
Bahcc1	C	T	11: 120,176,225 (GRCm39)	R1957C	probably damaging	Het
Bcar1	A	G	8: 112,442,030 (GRCm39)	V270A	probably damaging	Het
Camsap3	C	T	8: 3,654,708 (GRCm39)	R782C	probably damaging	Het
Capn15	C	A	17: 26,183,837 (GRCm39)	A215S	probably benign	Het
Casz1	T	C	4: 149,017,415 (GRCm39)	F235L	probably damaging	Het
Ccdc57	A	T	11: 120,794,134 (GRCm39)		probably benign	Het
Cdh23	A	G	10: 60,159,349 (GRCm39)	V2142A	probably damaging	Het
Cdx1	A	G	18: 61,152,970 (GRCm39)	V212A	probably benign	Het
Cep104	T	C	4: 154,074,296 (GRCm39)	L516P	possibly damaging	Het
Cep95	C	T	11: 106,705,464 (GRCm39)	T483I	probably damaging	Het
Cfap100	T	C	6: 90,389,329 (GRCm39)		probably benign	Het
Chia1	T	A	3: 106,035,875 (GRCm39)	N238K	probably benign	Het
Cntrl	T	C	2: 35,052,873 (GRCm39)	M1126T	probably benign	Het
Col28a1	A	G	6: 8,176,333 (GRCm39)	F8S	probably benign	Het
Cpeb3	C	T	19: 37,031,665 (GRCm39)	R579Q	probably damaging	Het
Dbh	A	G	2: 27,058,234 (GRCm39)	D134G	probably damaging	Het
Diaph3	A	C	14: 86,893,921 (GRCm39)	N29K	probably damaging	Het
Ephb1	C	T	9: 101,806,577 (GRCm39)	C819Y	probably damaging	Het
Eps8l2	G	A	7: 140,941,765 (GRCm39)	V650M	probably damaging	Het
Erlin1	T	C	19: 44,047,504 (GRCm39)	Y139C	probably damaging	Het
Fezf2	A	T	14: 12,343,988 (GRCm38)	V301E	probably damaging	Het
Fnbp4	T	C	2: 90,609,537 (GRCm39)		probably benign	Het
Gal3st4	T	A	5: 138,263,672 (GRCm39)	K442N	probably benign	Het
Gas6	T	C	8: 13,527,152 (GRCm39)	T199A	probably benign	Het
Gm10644	G	A	8: 84,660,479 (GRCm39)		probably benign	Het
Gpr88	G	T	3: 116,046,073 (GRCm39)	S79R	possibly damaging	Het
Grm4	A	T	17: 27,653,686 (GRCm39)	C755S	probably damaging	Het
Hdgfl2	A	G	17: 56,403,978 (GRCm39)	D278G	probably damaging	Het
Heatr5a	G	T	12: 51,952,250 (GRCm39)	A1130E	probably damaging	Het
Heatr9	T	G	11: 83,409,035 (GRCm39)	I171L	possibly damaging	Het
Hectd4	A	G	5: 121,460,357 (GRCm39)	T2209A	probably benign	Het
Hsh2d	A	G	8: 72,947,365 (GRCm39)	T21A	probably damaging	Het
Ing1	T	A	8: 11,611,577 (GRCm39)	V63E	probably damaging	Het
Irf4	A	T	13: 30,945,445 (GRCm39)	Q397L	probably benign	Het
Itgae	T	A	11: 73,009,469 (GRCm39)		probably benign	Het
Jrkl	A	T	9: 13,245,609 (GRCm39)	D17E	possibly damaging	Het
Kcnh6	T	A	11: 105,908,270 (GRCm39)	Y295*	probably null	Het
Klf5	T	C	14: 99,539,357 (GRCm39)	S177P	probably benign	Het
Lats1	T	A	10: 7,586,221 (GRCm39)		probably benign	Het
Lilrb4a	A	G	10: 51,368,045 (GRCm39)	I53M	probably benign	Het
Lrrc2	T	A	9: 110,810,007 (GRCm39)	Y348N	probably damaging	Het
Man1c1	G	C	4: 134,430,749 (GRCm39)	P11R	probably damaging	Het
Med25	A	G	7: 44,534,046 (GRCm39)	S245P	probably benign	Het
Mlh3	T	C	12: 85,308,442 (GRCm39)	Y1115C	probably benign	Het
Mslnl	G	A	17: 25,961,908 (GRCm39)	V128M	probably damaging	Het
Myh10	T	C	11: 68,681,034 (GRCm39)	L1025P	probably damaging	Het
Myof	T	A	19: 37,966,141 (GRCm39)	N393I	probably damaging	Het
Naip6	T	A	13: 100,435,936 (GRCm39)	E862D	probably benign	Het
Ncald	C	T	15: 37,397,324 (GRCm39)	A119T	probably benign	Het
Nipbl	T	C	15: 8,373,114 (GRCm39)	E1044G	possibly damaging	Het
Nyap2	T	C	1: 81,169,602 (GRCm39)	S120P	probably damaging	Het
Oas1a	A	T	5: 121,043,876 (GRCm39)	N85K	possibly damaging	Het
Or8b12i	T	C	9: 20,082,324 (GRCm39)	Y181C	probably benign	Het
Pappa2	A	T	1: 158,578,133 (GRCm39)	D1721E	probably damaging	Het
Pcid2	A	T	8: 13,144,141 (GRCm39)		probably null	Het
Pou2f2	C	T	7: 24,799,581 (GRCm39)	A92T	possibly damaging	Het
Ppp1r16a	T	C	15: 76,577,268 (GRCm39)	L212P	probably damaging	Het
Ptbp3	A	T	4: 59,517,635 (GRCm39)	L84Q	probably damaging	Het
Ptgr2	A	T	12: 84,349,096 (GRCm39)	Q145L	probably benign	Het
Pudp	T	C	18: 50,701,278 (GRCm39)	N152D	probably benign	Het
Rabggta	A	T	14: 55,958,646 (GRCm39)	F62L	possibly damaging	Het
Rasal3	G	A	17: 32,615,324 (GRCm39)	Q505*	probably null	Het
Rbm20	T	A	19: 53,852,518 (GRCm39)	L1166Q	probably damaging	Het
Rictor	T	G	15: 6,789,053 (GRCm39)	I223R	probably damaging	Het
Ripor1	A	T	8: 106,343,518 (GRCm39)	E270D	probably damaging	Het
Rorc	T	C	3: 94,298,480 (GRCm39)	C322R	probably damaging	Het
Rpgrip1l	T	C	8: 91,959,552 (GRCm39)	D1116G	probably benign	Het
Rsph4a	A	T	10: 33,789,068 (GRCm39)	N638Y	probably damaging	Het
Scn9a	A	G	2: 66,396,594 (GRCm39)	F100L	probably damaging	Het
Siglece	A	G	7: 43,307,219 (GRCm39)	V256A	probably benign	Het
Slc23a2	A	T	2: 131,898,686 (GRCm39)	L617Q	probably damaging	Het
Snx9	T	C	17: 5,978,531 (GRCm39)	I567T	possibly damaging	Het
Sptan1	C	G	2: 29,901,048 (GRCm39)	Q1425E	probably benign	Het
Srd5a3	G	A	5: 76,295,552 (GRCm39)	V81I	probably benign	Het
Sugp2	T	A	8: 70,706,310 (GRCm39)	I790K	probably damaging	Het
Syde2	T	G	3: 145,720,071 (GRCm39)	Y764*	probably null	Het
Tbl1xr1	T	C	3: 22,245,074 (GRCm39)		probably benign	Het
Tmem130	A	G	5: 144,674,666 (GRCm39)	F353S	probably damaging	Het
Tmem131	T	A	1: 36,835,347 (GRCm39)	K1591N	probably damaging	Het
Trim43c	T	A	9: 88,722,670 (GRCm39)	D105E	probably benign	Het
Urb2	C	A	8: 124,756,537 (GRCm39)	T748K	possibly damaging	Het
Vmn2r18	T	C	5: 151,499,286 (GRCm39)	N393D	probably benign	Het
Zfp292	G	A	4: 34,805,100 (GRCm39)	S2648F	possibly damaging	Het

Other mutations in Dnajc2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01313:Dnajc2	APN	5	21,979,974 (GRCm39)	missense	possibly damaging	0.83
IGL01479:Dnajc2	APN	5	21,962,891 (GRCm39)	missense	probably damaging	1.00
IGL01804:Dnajc2	APN	5	21,962,361 (GRCm39)	missense	probably damaging	1.00
IGL02478:Dnajc2	APN	5	21,981,788 (GRCm39)	missense	probably damaging	1.00
IGL02552:Dnajc2	APN	5	21,988,061 (GRCm39)	missense	probably damaging	1.00
IGL02657:Dnajc2	APN	5	21,975,479 (GRCm39)	splice site	probably benign
IGL02832:Dnajc2	APN	5	21,965,408 (GRCm39)	missense	probably benign
IGL03177:Dnajc2	APN	5	21,980,079 (GRCm39)	splice site	probably benign
R1915:Dnajc2	UTSW	5	21,986,317 (GRCm39)	critical splice donor site	probably null
R2024:Dnajc2	UTSW	5	21,981,788 (GRCm39)	missense	probably damaging	1.00
R2437:Dnajc2	UTSW	5	21,965,389 (GRCm39)	missense	probably benign	0.06
R4177:Dnajc2	UTSW	5	21,962,394 (GRCm39)	missense	probably benign	0.28
R4451:Dnajc2	UTSW	5	21,962,792 (GRCm39)	missense	possibly damaging	0.93
R4812:Dnajc2	UTSW	5	21,968,484 (GRCm39)	missense	probably benign	0.03
R4916:Dnajc2	UTSW	5	21,962,338 (GRCm39)	missense	probably damaging	1.00
R5013:Dnajc2	UTSW	5	21,962,771 (GRCm39)	nonsense	probably null
R5094:Dnajc2	UTSW	5	21,981,730 (GRCm39)	missense	probably damaging	1.00
R5124:Dnajc2	UTSW	5	21,968,482 (GRCm39)	missense	probably benign
R5891:Dnajc2	UTSW	5	21,966,709 (GRCm39)	missense	possibly damaging	0.67
R6192:Dnajc2	UTSW	5	21,973,646 (GRCm39)	missense	probably damaging	1.00
R6567:Dnajc2	UTSW	5	21,971,676 (GRCm39)	missense	probably damaging	1.00
R7211:Dnajc2	UTSW	5	21,981,777 (GRCm39)	missense	probably damaging	1.00
R7216:Dnajc2	UTSW	5	21,981,777 (GRCm39)	missense	probably damaging	1.00
R7418:Dnajc2	UTSW	5	21,965,622 (GRCm39)	critical splice donor site	probably null
R7728:Dnajc2	UTSW	5	21,975,538 (GRCm39)	missense	possibly damaging	0.62
R7877:Dnajc2	UTSW	5	21,965,637 (GRCm39)	missense	possibly damaging	0.88
R8156:Dnajc2	UTSW	5	21,986,317 (GRCm39)	critical splice donor site	probably null
R8231:Dnajc2	UTSW	5	21,966,689 (GRCm39)	missense	probably benign	0.00
R8360:Dnajc2	UTSW	5	21,962,705 (GRCm39)	missense	unknown
R8880:Dnajc2	UTSW	5	21,973,670 (GRCm39)	missense	probably damaging	1.00
R9648:Dnajc2	UTSW	5	21,968,478 (GRCm39)	missense	probably damaging	0.98
RF040:Dnajc2	UTSW	5	21,962,695 (GRCm39)	makesense	probably null
X0027:Dnajc2	UTSW	5	21,978,809 (GRCm39)	missense	possibly damaging	0.82

Predicted Primers

PCR Primer
(F):5'- AACCCGTTTCCTTGATGGG -3'
(R):5'- GGAACTCGGGCTCATTTCATG -3'

Sequencing Primer
(F):5'- CCTTGATGGGCAATGATTCTTACAG -3'
(R):5'- GAACTCGGGCTCATTTCATGCTAAG -3'

Posted On

2014-07-14