Mutagenetix > Incidental Mutation

Incidental Mutation 'R1946:Adamts5'

216714

Institutional Source

Beutler Lab

Gene Symbol

Adamts5

Ensembl Gene

ENSMUSG00000022894

Gene Name

ADAM metallopeptidase with thrombospondin type 1 motif 5

Synonyms

ADAM-TS5, 9530092O11Rik

MMRRC Submission

039964-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.187) question?

Stock #

R1946 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

85655045-85698013 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to A at 85696131 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Cysteine to Phenylalanine at position 342 (C342F)

Ref Sequence

ENSEMBL: ENSMUSP00000023611 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000023611]

AlphaFold

Q9R001

Predicted Effect

probably damaging
Transcript: ENSMUST00000023611
AA Change: C342F

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000023611
Gene: ENSMUSG00000022894
AA Change: C342F

Domain	Start	End	E-Value	Type
signal peptide	1	23	N/A	INTRINSIC
Pfam:Pep_M12B_propep	41	182	9.1e-18	PFAM
low complexity region	226	232	N/A	INTRINSIC
Pfam:Reprolysin_5	265	450	2.1e-16	PFAM
Pfam:Reprolysin_4	265	472	4.8e-14	PFAM
Pfam:Reprolysin	267	476	4.6e-26	PFAM
Pfam:Reprolysin_2	286	466	3.7e-13	PFAM
Pfam:Reprolysin_3	288	421	6.9e-17	PFAM
Blast:ACR	477	555	4e-15	BLAST
low complexity region	556	566	N/A	INTRINSIC
TSP1	570	622	6.04e-13	SMART
Pfam:ADAM_spacer1	732	852	1.7e-35	PFAM
TSP1	878	926	7.12e-2	SMART

Coding Region Coverage

1x: 99.1%
3x: 98.4%
10x: 96.7%
20x: 93.8%

Validation Efficiency

MGI Phenotype

FUNCTION: This gene encodes a member of "a disintegrin and metalloproteinase with thrombospondin motifs" (ADAMTS) family of multi-domain matrix-associated metalloendopeptidases that have diverse roles in tissue morphogenesis and pathophysiological remodeling, in inflammation and in vascular biology. The encoded preproprotein undergoes proteolytic processing to generate an active, zinc-dependent aggrecanase enzyme. Mice lacking the encoded protein are protected from surgery-induced osteoarthritis and antigen-induced arthritis. [provided by RefSeq, May 2016]
PHENOTYPE: Mice homozygous for one null allele exhibit a significant reduction in cartilage degradation after induction of osteoarthritis whereas those homozygous for another show no affect. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 76 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aasdh	A	G	5: 77,039,551 (GRCm39)	S253P	probably damaging	Het
Adgrv1	C	T	13: 81,522,368 (GRCm39)	C5923Y	probably damaging	Het
Aen	G	C	7: 78,552,420 (GRCm39)	E32Q	probably damaging	Het
Apba2	T	C	7: 64,394,378 (GRCm39)		probably null	Het
Arhgap44	A	G	11: 64,902,922 (GRCm39)	M509T	probably damaging	Het
Arpc1b	A	G	5: 145,059,443 (GRCm39)	T56A	probably null	Het
Atoh1	T	C	6: 64,706,443 (GRCm39)	V46A	probably benign	Het
Bmpr2	T	C	1: 59,907,556 (GRCm39)	V883A	possibly damaging	Het
Bpifa1	A	T	2: 153,987,554 (GRCm39)	I135F	probably damaging	Het
Bsn	A	G	9: 107,991,850 (GRCm39)	F1301L	probably damaging	Het
Capn13	T	C	17: 73,657,520 (GRCm39)	E240G	possibly damaging	Het
Ccdc18	A	G	5: 108,376,861 (GRCm39)	E1434G	probably damaging	Het
Coq8b	G	A	7: 26,939,299 (GRCm39)	V150I	possibly damaging	Het
Cpn1	G	A	19: 43,944,957 (GRCm39)	T450M	probably benign	Het
Dlg4	A	G	11: 69,930,401 (GRCm39)	Y432C	probably damaging	Het
Dnah8	C	A	17: 30,931,359 (GRCm39)	T1458K	probably benign	Het
Dock5	A	T	14: 68,023,765 (GRCm39)	M1132K	probably damaging	Het
Dsg2	A	G	18: 20,713,605 (GRCm39)	D192G	probably damaging	Het
F930017D23Rik	G	A	10: 43,469,440 (GRCm39)		noncoding transcript	Het
Fndc11	A	T	2: 180,863,627 (GRCm39)	D144V	probably benign	Het
Fut2	A	G	7: 45,300,748 (GRCm39)	F8S	probably damaging	Het
Gad2	A	T	2: 22,575,440 (GRCm39)	T515S	probably benign	Het
Ganab	T	A	19: 8,888,172 (GRCm39)	D439E	probably damaging	Het
Gm10228	C	A	16: 88,838,241 (GRCm39)	G21V	unknown	Het
Grm3	A	G	5: 9,562,123 (GRCm39)	W576R	probably damaging	Het
Gsdmc4	C	A	15: 63,774,629 (GRCm39)	D51Y	probably benign	Het
Hmcn2	T	C	2: 31,295,647 (GRCm39)	S2619P	probably damaging	Het
Kcnq2	T	A	2: 180,730,244 (GRCm39)	D446V	probably benign	Het
Kera	A	G	10: 97,445,009 (GRCm39)	K123E	probably benign	Het
Kmt2c	A	T	5: 25,520,152 (GRCm39)	V1986E	probably benign	Het
Lrp11	T	C	10: 7,499,540 (GRCm39)	Y244H	probably damaging	Het
Lrp1b	T	A	2: 40,555,159 (GRCm39)	D320V	unknown	Het
Lrrcc1	A	G	3: 14,615,453 (GRCm39)	R394G	probably benign	Het
Lrrk2	G	A	15: 91,620,864 (GRCm39)		probably null	Het
Map4k5	A	T	12: 69,892,529 (GRCm39)	D133E	probably damaging	Het
Megf11	A	T	9: 64,586,558 (GRCm39)	D461V	probably damaging	Het
Msrb3	A	G	10: 120,687,913 (GRCm39)	V54A	probably damaging	Het
Muc21	A	T	17: 35,933,416 (GRCm39)		probably benign	Het
Ncoa3	T	A	2: 165,901,097 (GRCm39)	N896K	possibly damaging	Het
Ncor2	G	A	5: 125,111,476 (GRCm39)	T1314I	probably damaging	Het
Nes	A	G	3: 87,885,821 (GRCm39)	Q1316R	possibly damaging	Het
Nfe2l3	A	C	6: 51,434,295 (GRCm39)	Q285P	probably damaging	Het
Nkd1	C	T	8: 89,318,745 (GRCm39)	H357Y	probably damaging	Het
Nmt2	T	A	2: 3,323,672 (GRCm39)	I355N	probably benign	Het
Or10ak11	T	C	4: 118,687,223 (GRCm39)	N139S	probably benign	Het
Or1n1b	A	T	2: 36,780,458 (GRCm39)	M134K	possibly damaging	Het
Or5ae1	T	C	7: 84,565,487 (GRCm39)	S167P	probably benign	Het
Or5b3	T	C	19: 13,388,143 (GRCm39)	V70A	possibly damaging	Het
Or7a38	T	A	10: 78,752,758 (GRCm39)	I28N	probably damaging	Het
Or8b3	T	A	9: 38,314,182 (GRCm39)	M1K	probably null	Het
Otx1	G	T	11: 21,948,482 (GRCm39)	T46K	probably damaging	Het
Panx1	A	G	9: 14,918,822 (GRCm39)	C346R	probably benign	Het
Pcdhb16	T	A	18: 37,611,952 (GRCm39)	L304*	probably null	Het
Plet1	A	G	9: 50,415,652 (GRCm39)		probably null	Het
Plod2	A	G	9: 92,489,188 (GRCm39)	S707G	probably damaging	Het
Plscr4	G	A	9: 92,365,889 (GRCm39)	V120I	probably damaging	Het
Ppp1r12b	A	G	1: 134,820,008 (GRCm39)	V245A	probably damaging	Het
Ppp2r2d	A	G	7: 138,470,196 (GRCm39)	D19G	probably damaging	Het
Pramel31	T	A	4: 144,088,435 (GRCm39)	V77E	probably benign	Het
Rimbp3	G	A	16: 17,028,291 (GRCm39)	V572I	probably benign	Het
Ror2	T	C	13: 53,285,885 (GRCm39)	I110V	probably damaging	Het
Sec24d	A	T	3: 123,147,043 (GRCm39)	H667L	probably benign	Het
Sema3d	A	G	5: 12,623,810 (GRCm39)	Q573R	probably damaging	Het
Snx19	T	A	9: 30,343,620 (GRCm39)	N593K	probably damaging	Het
Sulf1	T	C	1: 12,867,131 (GRCm39)	V105A	probably benign	Het
Syngr3	T	C	17: 24,906,680 (GRCm39)	N45S	probably benign	Het
Tenm4	A	T	7: 96,385,015 (GRCm39)	H524L	probably damaging	Het
Tex30	C	T	1: 44,130,564 (GRCm39)	G68D	probably damaging	Het
Tmem43	A	T	6: 91,463,891 (GRCm39)	I389F	probably benign	Het
Trpm1	A	T	7: 63,873,556 (GRCm39)	N488Y	probably damaging	Het
Usf2	T	C	7: 30,655,663 (GRCm39)	T1A	probably null	Het
Vill	A	T	9: 118,887,560 (GRCm39)	H108L	probably benign	Het
Vmn1r16	T	C	6: 57,299,885 (GRCm39)	I246V	probably benign	Het
Vmn1r188	T	G	13: 22,272,815 (GRCm39)	S256R	possibly damaging	Het
Zfp12	G	A	5: 143,231,133 (GRCm39)	E487K	probably damaging	Het
Zfp24	AC	A	18: 24,147,476 (GRCm39)		probably null	Het

Other mutations in Adamts5

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01063:Adamts5	APN	16	85,696,722 (GRCm39)	missense	probably damaging	1.00
IGL01070:Adamts5	APN	16	85,660,021 (GRCm39)	missense	probably damaging	1.00
IGL01321:Adamts5	APN	16	85,696,363 (GRCm39)	missense	probably benign	0.03
IGL01616:Adamts5	APN	16	85,684,702 (GRCm39)	splice site	probably null
IGL02551:Adamts5	APN	16	85,666,926 (GRCm39)	missense	possibly damaging	0.71
IGL03263:Adamts5	APN	16	85,666,830 (GRCm39)	missense	probably damaging	0.99
IGL03295:Adamts5	APN	16	85,674,833 (GRCm39)	missense	probably damaging	1.00
IGL03393:Adamts5	APN	16	85,665,083 (GRCm39)	missense	probably damaging	0.99
IGL03403:Adamts5	APN	16	85,659,902 (GRCm39)	missense	probably damaging	0.97
R0414:Adamts5	UTSW	16	85,674,794 (GRCm39)	missense	probably damaging	1.00
R0419:Adamts5	UTSW	16	85,663,530 (GRCm39)	missense	probably benign	0.00
R0539:Adamts5	UTSW	16	85,665,580 (GRCm39)	missense	probably damaging	1.00
R0570:Adamts5	UTSW	16	85,696,135 (GRCm39)	missense	probably damaging	1.00
R0574:Adamts5	UTSW	16	85,696,372 (GRCm39)	missense	probably damaging	0.99
R0669:Adamts5	UTSW	16	85,696,614 (GRCm39)	missense	probably benign	0.45
R1454:Adamts5	UTSW	16	85,666,881 (GRCm39)	missense	possibly damaging	0.88
R1498:Adamts5	UTSW	16	85,696,990 (GRCm39)	missense	possibly damaging	0.63
R1729:Adamts5	UTSW	16	85,674,803 (GRCm39)	nonsense	probably null
R1753:Adamts5	UTSW	16	85,696,240 (GRCm39)	missense	probably damaging	1.00
R1784:Adamts5	UTSW	16	85,674,803 (GRCm39)	nonsense	probably null
R1906:Adamts5	UTSW	16	85,665,573 (GRCm39)	nonsense	probably null
R2180:Adamts5	UTSW	16	85,684,812 (GRCm39)	missense	probably damaging	1.00
R2223:Adamts5	UTSW	16	85,696,194 (GRCm39)	missense	probably damaging	1.00
R2366:Adamts5	UTSW	16	85,659,646 (GRCm39)	missense	probably damaging	1.00
R3889:Adamts5	UTSW	16	85,665,009 (GRCm39)	missense	probably damaging	1.00
R4214:Adamts5	UTSW	16	85,665,531 (GRCm39)	missense	probably damaging	1.00
R4909:Adamts5	UTSW	16	85,696,954 (GRCm39)	nonsense	probably null
R5119:Adamts5	UTSW	16	85,696,466 (GRCm39)	missense	probably benign	0.00
R5230:Adamts5	UTSW	16	85,666,956 (GRCm39)	missense	probably damaging	0.97
R5452:Adamts5	UTSW	16	85,666,800 (GRCm39)	critical splice donor site	probably benign
R5652:Adamts5	UTSW	16	85,696,156 (GRCm39)	missense	probably damaging	1.00
R5831:Adamts5	UTSW	16	85,665,006 (GRCm39)	missense	probably damaging	1.00
R6045:Adamts5	UTSW	16	85,696,188 (GRCm39)	missense	probably damaging	0.99
R6259:Adamts5	UTSW	16	85,696,641 (GRCm39)	missense	probably benign	0.03
R6384:Adamts5	UTSW	16	85,659,716 (GRCm39)	missense	probably benign	0.00
R6724:Adamts5	UTSW	16	85,665,445 (GRCm39)	missense	probably benign	0.06
R6829:Adamts5	UTSW	16	85,666,959 (GRCm39)	missense	possibly damaging	0.52
R7066:Adamts5	UTSW	16	85,659,652 (GRCm39)	missense	probably damaging	1.00
R7256:Adamts5	UTSW	16	85,659,923 (GRCm39)	missense	probably damaging	1.00
R7293:Adamts5	UTSW	16	85,696,833 (GRCm39)	missense	probably benign	0.10
R7298:Adamts5	UTSW	16	85,696,806 (GRCm39)	missense	probably benign	0.35
R7384:Adamts5	UTSW	16	85,696,714 (GRCm39)	missense	probably benign	0.02
R7452:Adamts5	UTSW	16	85,674,869 (GRCm39)	missense	probably benign	0.00
R7727:Adamts5	UTSW	16	85,696,854 (GRCm39)	missense	probably damaging	1.00
R7785:Adamts5	UTSW	16	85,659,892 (GRCm39)	missense	probably damaging	0.99
R7894:Adamts5	UTSW	16	85,674,808 (GRCm39)	nonsense	probably null
R8111:Adamts5	UTSW	16	85,696,203 (GRCm39)	missense	probably damaging	1.00
R8370:Adamts5	UTSW	16	85,696,881 (GRCm39)	missense	possibly damaging	0.74
R8413:Adamts5	UTSW	16	85,663,506 (GRCm39)	critical splice donor site	probably null
R8505:Adamts5	UTSW	16	85,696,944 (GRCm39)	missense	probably benign	0.42
R8804:Adamts5	UTSW	16	85,666,800 (GRCm39)	critical splice donor site	probably benign
R9209:Adamts5	UTSW	16	85,666,971 (GRCm39)	missense	probably damaging	1.00
R9455:Adamts5	UTSW	16	85,667,017 (GRCm39)	missense	probably damaging	0.99
R9616:Adamts5	UTSW	16	85,659,674 (GRCm39)	missense	probably benign	0.34
X0062:Adamts5	UTSW	16	85,660,045 (GRCm39)	missense	probably damaging	1.00
Z1177:Adamts5	UTSW	16	85,666,962 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- AGTGGTTTGCATGCAAGATG -3'
(R):5'- GTCCATGGCCAGGATGTATG -3'

Sequencing Primer
(F):5'- CTATTGAGTGACAAGTCCTTTATGG -3'
(R):5'- GCCAGGATGTATGGGCGG -3'

Posted On

2014-08-01