Mutagenetix > Incidental Mutation

Incidental Mutation 'R1951:Vps13c'

217313

Institutional Source

Beutler Lab

Gene Symbol

Vps13c

Ensembl Gene

ENSMUSG00000035284

Gene Name

vacuolar protein sorting 13C

Synonyms

C230055H22Rik

MMRRC Submission

039965-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R1951 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

67840396-67995638 bp(+) (GRCm38)

Type of Mutation

critical splice donor site (2 bp from exon)

DNA Base Change (assembly)

T to C at 67973759 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Gene Model

predicted gene model for transcript(s): [ENSMUST00000077879] [ENSMUST00000077879]

AlphaFold

no structure available at present

Predicted Effect

probably null
Transcript: ENSMUST00000077879

SMART Domains

Protein: ENSMUSP00000077040
Gene: ENSMUSG00000035284

Domain	Start	End	E-Value	Type
Pfam:Chorein_N	3	117	1.3e-39	PFAM
low complexity region	151	165	N/A	INTRINSIC
Pfam:VPS13	182	414	7.9e-70	PFAM
coiled coil region	422	443	N/A	INTRINSIC
low complexity region	479	490	N/A	INTRINSIC
Pfam:VPS13_mid_rpt	611	832	7.8e-71	PFAM
low complexity region	867	885	N/A	INTRINSIC
low complexity region	1020	1036	N/A	INTRINSIC
low complexity region	1112	1123	N/A	INTRINSIC
Pfam:VPS13_mid_rpt	1172	1369	2.1e-14	PFAM
low complexity region	1552	1573	N/A	INTRINSIC
Pfam:VPS13_mid_rpt	1685	1883	2.8e-13	PFAM
Blast:INB	2128	2403	2e-48	BLAST
Pfam:SHR-BD	2759	3013	9.9e-32	PFAM
Pfam:VPS13_C	3317	3495	5.7e-65	PFAM
Pfam:ATG_C	3498	3588	7.9e-12	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000077879

SMART Domains

Protein: ENSMUSP00000077040
Gene: ENSMUSG00000035284

Domain	Start	End	E-Value	Type
Pfam:Chorein_N	3	117	1.3e-39	PFAM
low complexity region	151	165	N/A	INTRINSIC
Pfam:VPS13	182	414	7.9e-70	PFAM
coiled coil region	422	443	N/A	INTRINSIC
low complexity region	479	490	N/A	INTRINSIC
Pfam:VPS13_mid_rpt	611	832	7.8e-71	PFAM
low complexity region	867	885	N/A	INTRINSIC
low complexity region	1020	1036	N/A	INTRINSIC
low complexity region	1112	1123	N/A	INTRINSIC
Pfam:VPS13_mid_rpt	1172	1369	2.1e-14	PFAM
low complexity region	1552	1573	N/A	INTRINSIC
Pfam:VPS13_mid_rpt	1685	1883	2.8e-13	PFAM
Blast:INB	2128	2403	2e-48	BLAST
Pfam:SHR-BD	2759	3013	9.9e-32	PFAM
Pfam:VPS13_C	3317	3495	5.7e-65	PFAM
Pfam:ATG_C	3498	3588	7.9e-12	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000213168

Predicted Effect

probably null
Transcript: ENSMUST00000213168

Predicted Effect

probably benign
Transcript: ENSMUST00000215524

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000216856

Meta Mutation Damage Score

0.9577

Coding Region Coverage

1x: 99.2%
3x: 98.5%
10x: 96.8%
20x: 94.2%

Validation Efficiency

98% (84/86)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the vacuolar protein sorting-associated 13 gene family. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Oct 2010]

Allele List at MGI

All alleles(13) : Targeted, other(2) Gene trapped(11)

Other mutations in this stock

Total: 82 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca15	C	T	7: 120,361,432 (GRCm38)	R706C	probably damaging	Het
Adcy3	T	C	12: 4,208,624 (GRCm38)	F847S	probably benign	Het
Alyref	C	G	11: 120,595,932 (GRCm38)	V168L	probably damaging	Het
Arhgap28	G	A	17: 67,901,341 (GRCm38)	A44V	probably benign	Het
Asap3	C	T	4: 136,227,456 (GRCm38)	R60*	probably null	Het
Baz1b	T	A	5: 135,216,739 (GRCm38)	N347K	probably benign	Het
Best2	T	A	8: 85,011,229 (GRCm38)	N179I	possibly damaging	Het
Bfar	C	T	16: 13,702,106 (GRCm38)	S276L	probably damaging	Het
Bloc1s3	A	G	7: 19,507,558 (GRCm38)	V15A	possibly damaging	Het
Borcs5	A	G	6: 134,710,267 (GRCm38)	H196R	unknown	Het
Calhm3	A	G	19: 47,151,817 (GRCm38)	L279P	probably benign	Het
Cand1	A	T	10: 119,208,020 (GRCm38)		probably benign	Het
Car15	T	C	16: 17,837,405 (GRCm38)	D57G	possibly damaging	Het
Casp12	G	A	9: 5,348,959 (GRCm38)		probably null	Het
Cd93	T	C	2: 148,441,858 (GRCm38)	T523A	probably benign	Het
Ces4a	G	A	8: 105,138,097 (GRCm38)	G69S	probably damaging	Het
Ckap5	A	G	2: 91,556,492 (GRCm38)		probably benign	Het
Col6a5	G	A	9: 105,936,957 (GRCm38)	R619W	unknown	Het
Colec12	G	A	18: 9,859,975 (GRCm38)		probably null	Het
Crmp1	G	A	5: 37,273,355 (GRCm38)	V222I	possibly damaging	Het
Crnkl1	G	A	2: 145,928,200 (GRCm38)	A241V	probably damaging	Het
Ctbp2	A	G	7: 133,015,027 (GRCm38)	S60P	probably benign	Het
Cyp2c68	T	C	19: 39,712,528 (GRCm38)	Y282C	probably benign	Het
Dhx36	T	C	3: 62,484,273 (GRCm38)	I551V	probably damaging	Het
Dlg5	T	A	14: 24,156,469 (GRCm38)		probably benign	Het
Dlgap1	A	T	17: 70,761,311 (GRCm38)	I300F	probably damaging	Het
Dmd	T	A	X: 83,830,517 (GRCm38)	I1342N	probably damaging	Het
Dnah6	T	A	6: 73,084,721 (GRCm38)	R2794*	probably null	Het
Fcgr1	G	A	3: 96,287,070 (GRCm38)	T167I	probably damaging	Het
Fgl1	G	T	8: 41,197,350 (GRCm38)	F187L	probably benign	Het
Fras1	T	A	5: 96,712,383 (GRCm38)	V2096E	probably benign	Het
Gm10647	A	G	9: 66,798,480 (GRCm38)		probably benign	Het
Gm14226	G	A	2: 155,024,335 (GRCm38)	D71N	possibly damaging	Het
Grip2	A	T	6: 91,783,848 (GRCm38)	I284N	probably damaging	Het
Hirip3	A	G	7: 126,862,866 (GRCm38)	R19G	probably damaging	Het
Ift70b	A	G	2: 75,937,242 (GRCm38)	L389P	probably damaging	Het
Irx5	A	G	8: 92,359,810 (GRCm38)	N174D	probably damaging	Het
Itgal	A	G	7: 127,330,145 (GRCm38)	D1078G	probably damaging	Het
Khdc3	T	C	9: 73,103,237 (GRCm38)	V123A	possibly damaging	Het
Klhl13	A	G	X: 23,261,581 (GRCm38)		probably benign	Het
Klhl42	T	C	6: 147,091,823 (GRCm38)	S98P	probably damaging	Het
Lrp5	T	C	19: 3,620,298 (GRCm38)	N602S	possibly damaging	Het
Lrrd1	A	T	5: 3,851,488 (GRCm38)	I598F	probably damaging	Het
Ltbp1	A	G	17: 75,151,377 (GRCm38)	T318A	probably benign	Het
Mfsd6	A	G	1: 52,709,358 (GRCm38)	F116S	probably damaging	Het
Ncam1	T	C	9: 49,545,192 (GRCm38)	I486V	probably benign	Het
Nptx1	A	G	11: 119,543,180 (GRCm38)		probably null	Het
Nrg1	T	C	8: 31,918,193 (GRCm38)	Y4C	probably damaging	Het
Nsf	G	A	11: 103,882,876 (GRCm38)	R271*	probably null	Het
Or5d39	A	G	2: 88,149,297 (GRCm38)	S241P	possibly damaging	Het
Or8g24	T	A	9: 39,078,284 (GRCm38)	I154F	probably benign	Het
Or8k18	G	C	2: 86,255,096 (GRCm38)	T199S	probably benign	Het
Or8k21	T	A	2: 86,315,160 (GRCm38)	N42I	probably damaging	Het
Or8k24	A	T	2: 86,385,511 (GRCm38)	H302Q	probably benign	Het
Pax2	A	G	19: 44,788,832 (GRCm38)	T155A	probably benign	Het
Pdia4	A	G	6: 47,803,879 (GRCm38)	Y212H	probably damaging	Het
Pgr	A	G	9: 8,946,953 (GRCm38)		probably benign	Het
Pitpnm3	G	T	11: 72,074,624 (GRCm38)	H112N	possibly damaging	Het
Ppargc1b	G	T	18: 61,298,777 (GRCm38)	T1000K	possibly damaging	Het
Psd3	C	A	8: 67,963,487 (GRCm38)	C586F	probably benign	Het
Ptprm	A	T	17: 66,940,580 (GRCm38)	S587T	probably benign	Het
Rabep2	A	T	7: 126,438,564 (GRCm38)	R169S	possibly damaging	Het
Rad21l	T	C	2: 151,655,259 (GRCm38)	R309G	probably benign	Het
Rbm12	T	C	2: 156,097,213 (GRCm38)	R380G	probably damaging	Het
Selp	A	G	1: 164,126,512 (GRCm38)	N127S	probably benign	Het
Slc12a2	A	G	18: 57,879,395 (GRCm38)	T197A	possibly damaging	Het
Slc22a18	C	T	7: 143,476,247 (GRCm38)	T17I	probably damaging	Het
Sptbn4	T	C	7: 27,366,443 (GRCm38)	E2026G	possibly damaging	Het
Srf	A	T	17: 46,551,707 (GRCm38)	M285K	possibly damaging	Het
Tanc1	T	C	2: 59,791,812 (GRCm38)	V425A	possibly damaging	Het
Tle4	A	T	19: 14,516,357 (GRCm38)		probably null	Het
Tmem132e	A	G	11: 82,445,082 (GRCm38)	R905G	possibly damaging	Het
Tmem200c	A	T	17: 68,840,988 (GRCm38)	I189F	probably damaging	Het
Trappc13	T	C	13: 104,174,642 (GRCm38)	Q87R	probably benign	Het
Trpm7	A	T	2: 126,831,299 (GRCm38)	D511E	probably damaging	Het
Ttn	A	T	2: 76,802,290 (GRCm38)	I14140N	possibly damaging	Het
Virma	A	G	4: 11,513,907 (GRCm38)	D587G	probably benign	Het
Vmn1r72	A	G	7: 11,669,804 (GRCm38)	L239P	probably damaging	Het
Vmn2r68	A	G	7: 85,233,894 (GRCm38)	F217L	probably damaging	Het
Vrtn	T	C	12: 84,649,199 (GRCm38)	V241A	probably damaging	Het
Xdh	T	C	17: 73,907,658 (GRCm38)	E764G	probably damaging	Het
Zranb3	A	T	1: 127,999,399 (GRCm38)	V343D	probably damaging	Het

Other mutations in Vps13c

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00159:Vps13c	APN	9	67,945,999 (GRCm38)	missense	probably benign	0.20
IGL00336:Vps13c	APN	9	67,945,942 (GRCm38)	missense	probably benign	0.01
IGL00418:Vps13c	APN	9	67,876,262 (GRCm38)	missense	probably damaging	1.00
IGL00481:Vps13c	APN	9	67,860,865 (GRCm38)	missense	probably damaging	1.00
IGL00491:Vps13c	APN	9	67,893,136 (GRCm38)	missense	probably damaging	1.00
IGL00558:Vps13c	APN	9	67,937,857 (GRCm38)	missense	possibly damaging	0.52
IGL00811:Vps13c	APN	9	67,948,181 (GRCm38)	missense	probably damaging	0.99
IGL01011:Vps13c	APN	9	67,926,955 (GRCm38)	missense	probably damaging	0.98
IGL01094:Vps13c	APN	9	67,886,284 (GRCm38)	missense	probably damaging	1.00
IGL01330:Vps13c	APN	9	67,964,108 (GRCm38)	missense	probably damaging	1.00
IGL01402:Vps13c	APN	9	67,913,204 (GRCm38)	critical splice acceptor site	probably null
IGL01404:Vps13c	APN	9	67,913,204 (GRCm38)	critical splice acceptor site	probably null
IGL01470:Vps13c	APN	9	67,912,927 (GRCm38)	splice site	probably benign
IGL01615:Vps13c	APN	9	67,955,781 (GRCm38)	missense	probably benign	0.01
IGL01694:Vps13c	APN	9	67,895,349 (GRCm38)	missense	probably damaging	1.00
IGL01752:Vps13c	APN	9	67,948,228 (GRCm38)	missense	probably damaging	1.00
IGL01810:Vps13c	APN	9	67,955,780 (GRCm38)	missense	probably benign
IGL01954:Vps13c	APN	9	67,969,298 (GRCm38)	missense	probably damaging	0.98
IGL01978:Vps13c	APN	9	67,930,643 (GRCm38)	missense	probably benign	0.03
IGL01998:Vps13c	APN	9	67,955,068 (GRCm38)	splice site	probably null
IGL02201:Vps13c	APN	9	67,967,136 (GRCm38)	missense	probably damaging	1.00
IGL02205:Vps13c	APN	9	67,883,454 (GRCm38)	missense	probably damaging	1.00
IGL02303:Vps13c	APN	9	67,945,481 (GRCm38)	splice site	probably benign
IGL02322:Vps13c	APN	9	67,937,901 (GRCm38)	missense	probably benign	0.02
IGL02456:Vps13c	APN	9	67,952,976 (GRCm38)	missense	probably damaging	1.00
IGL02474:Vps13c	APN	9	67,937,876 (GRCm38)	missense	probably benign	0.00
IGL02547:Vps13c	APN	9	67,908,019 (GRCm38)	missense	possibly damaging	0.83
IGL02640:Vps13c	APN	9	67,886,248 (GRCm38)	splice site	probably benign
IGL02673:Vps13c	APN	9	67,878,098 (GRCm38)	missense	probably damaging	1.00
IGL02721:Vps13c	APN	9	67,964,149 (GRCm38)	splice site	probably benign
IGL02834:Vps13c	APN	9	67,937,855 (GRCm38)	missense	probably benign
IGL02838:Vps13c	APN	9	67,975,851 (GRCm38)	missense	probably damaging	1.00
IGL03136:Vps13c	APN	9	67,950,310 (GRCm38)	missense	probably damaging	1.00
IGL03137:Vps13c	APN	9	67,890,380 (GRCm38)	missense	probably damaging	1.00
IGL03214:Vps13c	APN	9	67,897,195 (GRCm38)	missense	probably null	0.81
IGL03240:Vps13c	APN	9	67,955,047 (GRCm38)	missense	probably benign
IGL03303:Vps13c	APN	9	67,934,504 (GRCm38)	missense	probably benign	0.27
IGL03336:Vps13c	APN	9	67,951,642 (GRCm38)	missense	possibly damaging	0.76
IGL03366:Vps13c	APN	9	67,946,026 (GRCm38)	missense	probably benign	0.00
Derivative	UTSW	9	67,930,622 (GRCm38)	missense	possibly damaging	0.79
diversion	UTSW	9	67,910,233 (GRCm38)	missense	possibly damaging	0.93
introversion	UTSW	9	67,944,046 (GRCm38)	missense	probably damaging	0.98
Inversion	UTSW	9	67,902,839 (GRCm38)	critical splice acceptor site	probably null
subversion	UTSW	9	67,908,052 (GRCm38)	missense	probably damaging	1.00
Transversion	UTSW	9	67,934,501 (GRCm38)	missense	probably damaging	0.98
3-1:Vps13c	UTSW	9	67,936,373 (GRCm38)	missense	probably benign	0.00
IGL02991:Vps13c	UTSW	9	67,913,877 (GRCm38)	missense	probably damaging	1.00
PIT4802001:Vps13c	UTSW	9	67,937,786 (GRCm38)	missense	probably damaging	1.00
R0008:Vps13c	UTSW	9	67,919,262 (GRCm38)	missense	probably benign
R0206:Vps13c	UTSW	9	67,939,162 (GRCm38)	splice site	probably benign
R0288:Vps13c	UTSW	9	67,927,366 (GRCm38)	missense	probably damaging	0.99
R0324:Vps13c	UTSW	9	67,964,309 (GRCm38)	missense	possibly damaging	0.95
R0347:Vps13c	UTSW	9	67,910,233 (GRCm38)	missense	possibly damaging	0.93
R0374:Vps13c	UTSW	9	67,886,246 (GRCm38)	splice site	probably benign
R0388:Vps13c	UTSW	9	67,922,915 (GRCm38)	splice site	probably benign
R0409:Vps13c	UTSW	9	67,951,644 (GRCm38)	missense	probably benign	0.00
R0440:Vps13c	UTSW	9	67,972,861 (GRCm38)	missense	probably damaging	1.00
R0513:Vps13c	UTSW	9	67,930,735 (GRCm38)	missense	probably benign	0.02
R0520:Vps13c	UTSW	9	67,945,851 (GRCm38)	missense	possibly damaging	0.88
R0569:Vps13c	UTSW	9	67,973,719 (GRCm38)	missense	probably damaging	0.98
R0601:Vps13c	UTSW	9	67,927,472 (GRCm38)	missense	probably benign	0.12
R0659:Vps13c	UTSW	9	67,920,935 (GRCm38)	missense	probably benign	0.11
R0667:Vps13c	UTSW	9	67,951,573 (GRCm38)	nonsense	probably null
R0670:Vps13c	UTSW	9	67,925,857 (GRCm38)	missense	probably benign	0.35
R0698:Vps13c	UTSW	9	67,889,723 (GRCm38)	missense	probably benign	0.45
R0729:Vps13c	UTSW	9	67,961,649 (GRCm38)	missense	probably damaging	1.00
R0781:Vps13c	UTSW	9	67,972,003 (GRCm38)	missense	probably damaging	1.00
R0811:Vps13c	UTSW	9	67,934,476 (GRCm38)	missense	probably benign	0.06
R0812:Vps13c	UTSW	9	67,934,476 (GRCm38)	missense	probably benign	0.06
R0839:Vps13c	UTSW	9	67,898,738 (GRCm38)	missense	probably benign
R1373:Vps13c	UTSW	9	67,927,511 (GRCm38)	missense	probably damaging	0.99
R1396:Vps13c	UTSW	9	67,955,022 (GRCm38)	missense	probably benign	0.00
R1499:Vps13c	UTSW	9	67,957,505 (GRCm38)	missense	probably benign	0.00
R1556:Vps13c	UTSW	9	67,930,711 (GRCm38)	missense	probably damaging	0.98
R1560:Vps13c	UTSW	9	67,936,463 (GRCm38)	critical splice donor site	probably null
R1584:Vps13c	UTSW	9	67,893,112 (GRCm38)	missense	possibly damaging	0.74
R1654:Vps13c	UTSW	9	67,951,687 (GRCm38)	missense	probably damaging	1.00
R1674:Vps13c	UTSW	9	67,853,703 (GRCm38)	nonsense	probably null
R1676:Vps13c	UTSW	9	67,926,962 (GRCm38)	missense	probably benign	0.20
R1695:Vps13c	UTSW	9	67,972,075 (GRCm38)	nonsense	probably null
R1710:Vps13c	UTSW	9	67,911,529 (GRCm38)	missense	probably benign	0.00
R1769:Vps13c	UTSW	9	67,965,721 (GRCm38)	missense	probably benign	0.00
R1775:Vps13c	UTSW	9	67,881,447 (GRCm38)	missense	probably damaging	1.00
R1795:Vps13c	UTSW	9	67,893,985 (GRCm38)	nonsense	probably null
R1799:Vps13c	UTSW	9	67,944,117 (GRCm38)	missense	probably damaging	0.98
R1835:Vps13c	UTSW	9	67,993,013 (GRCm38)	missense	probably benign	0.08
R1848:Vps13c	UTSW	9	67,936,340 (GRCm38)	missense	probably benign
R1903:Vps13c	UTSW	9	67,894,052 (GRCm38)	missense	probably damaging	1.00
R1944:Vps13c	UTSW	9	67,886,276 (GRCm38)	missense	probably damaging	1.00
R1945:Vps13c	UTSW	9	67,886,276 (GRCm38)	missense	probably damaging	1.00
R1993:Vps13c	UTSW	9	67,975,856 (GRCm38)	missense	probably damaging	1.00
R2023:Vps13c	UTSW	9	67,936,285 (GRCm38)	splice site	probably benign
R2059:Vps13c	UTSW	9	67,860,833 (GRCm38)	missense	probably damaging	1.00
R2086:Vps13c	UTSW	9	67,950,289 (GRCm38)	missense	probably benign	0.29
R2120:Vps13c	UTSW	9	67,919,334 (GRCm38)	missense	possibly damaging	0.92
R2249:Vps13c	UTSW	9	67,988,053 (GRCm38)	critical splice donor site	probably null
R2257:Vps13c	UTSW	9	67,952,946 (GRCm38)	missense	possibly damaging	0.87
R2258:Vps13c	UTSW	9	67,953,860 (GRCm38)	missense	probably benign	0.01
R2259:Vps13c	UTSW	9	67,953,860 (GRCm38)	missense	probably benign	0.01
R2260:Vps13c	UTSW	9	67,953,860 (GRCm38)	missense	probably benign	0.01
R2265:Vps13c	UTSW	9	67,920,947 (GRCm38)	missense	possibly damaging	0.82
R2266:Vps13c	UTSW	9	67,920,947 (GRCm38)	missense	possibly damaging	0.82
R2269:Vps13c	UTSW	9	67,920,947 (GRCm38)	missense	possibly damaging	0.82
R2278:Vps13c	UTSW	9	67,939,072 (GRCm38)	missense	probably benign
R2306:Vps13c	UTSW	9	67,987,993 (GRCm38)	missense	probably damaging	0.99
R2327:Vps13c	UTSW	9	67,913,820 (GRCm38)	missense	probably damaging	0.98
R2349:Vps13c	UTSW	9	67,957,526 (GRCm38)	missense	possibly damaging	0.89
R2483:Vps13c	UTSW	9	67,975,907 (GRCm38)	critical splice donor site	probably null
R3031:Vps13c	UTSW	9	67,923,770 (GRCm38)	missense	probably benign	0.00
R3623:Vps13c	UTSW	9	67,975,907 (GRCm38)	critical splice donor site	probably null
R3870:Vps13c	UTSW	9	67,884,726 (GRCm38)	missense	probably benign	0.00
R4173:Vps13c	UTSW	9	67,936,313 (GRCm38)	missense	probably benign	0.00
R4445:Vps13c	UTSW	9	67,982,495 (GRCm38)	splice site	probably null
R4491:Vps13c	UTSW	9	67,910,193 (GRCm38)	missense	probably benign
R4505:Vps13c	UTSW	9	67,939,034 (GRCm38)	missense	probably benign	0.02
R4574:Vps13c	UTSW	9	67,951,683 (GRCm38)	missense	probably damaging	1.00
R4691:Vps13c	UTSW	9	67,952,935 (GRCm38)	missense	possibly damaging	0.95
R4766:Vps13c	UTSW	9	67,878,224 (GRCm38)	splice site	probably null
R4771:Vps13c	UTSW	9	67,929,539 (GRCm38)	missense	probably benign
R4801:Vps13c	UTSW	9	67,964,282 (GRCm38)	missense	probably damaging	1.00
R4802:Vps13c	UTSW	9	67,964,282 (GRCm38)	missense	probably damaging	1.00
R4962:Vps13c	UTSW	9	67,873,891 (GRCm38)	missense	probably damaging	1.00
R4995:Vps13c	UTSW	9	67,919,321 (GRCm38)	missense	probably benign	0.00
R5010:Vps13c	UTSW	9	67,916,379 (GRCm38)	missense	probably benign	0.19
R5183:Vps13c	UTSW	9	67,908,052 (GRCm38)	missense	probably damaging	1.00
R5226:Vps13c	UTSW	9	67,945,553 (GRCm38)	missense	probably benign	0.17
R5297:Vps13c	UTSW	9	67,878,131 (GRCm38)	missense	probably damaging	1.00
R5456:Vps13c	UTSW	9	67,927,447 (GRCm38)	missense	possibly damaging	0.53
R5494:Vps13c	UTSW	9	67,948,146 (GRCm38)	missense	probably benign	0.00
R5521:Vps13c	UTSW	9	67,951,439 (GRCm38)	missense	probably benign	0.08
R5524:Vps13c	UTSW	9	67,957,556 (GRCm38)	missense	probably damaging	1.00
R5685:Vps13c	UTSW	9	67,963,173 (GRCm38)	missense	possibly damaging	0.64
R5731:Vps13c	UTSW	9	67,895,379 (GRCm38)	missense	probably damaging	1.00
R5812:Vps13c	UTSW	9	67,982,495 (GRCm38)	splice site	probably benign
R5867:Vps13c	UTSW	9	67,982,622 (GRCm38)	splice site	probably null
R5893:Vps13c	UTSW	9	67,902,839 (GRCm38)	critical splice acceptor site	probably null
R5902:Vps13c	UTSW	9	67,934,447 (GRCm38)	missense	probably benign	0.00
R5957:Vps13c	UTSW	9	67,954,971 (GRCm38)	missense	probably damaging	1.00
R6076:Vps13c	UTSW	9	67,911,602 (GRCm38)	missense	probably damaging	1.00
R6187:Vps13c	UTSW	9	67,915,657 (GRCm38)	missense	probably damaging	1.00
R6268:Vps13c	UTSW	9	67,951,449 (GRCm38)	missense	probably benign	0.10
R6547:Vps13c	UTSW	9	67,973,365 (GRCm38)	missense	probably damaging	1.00
R6716:Vps13c	UTSW	9	67,951,467 (GRCm38)	missense	probably benign	0.00
R6837:Vps13c	UTSW	9	67,910,222 (GRCm38)	missense	probably benign
R6919:Vps13c	UTSW	9	67,927,452 (GRCm38)	missense	probably damaging	0.97
R7039:Vps13c	UTSW	9	67,937,763 (GRCm38)	missense	probably damaging	1.00
R7058:Vps13c	UTSW	9	67,923,828 (GRCm38)	missense	probably benign	0.39
R7082:Vps13c	UTSW	9	67,883,453 (GRCm38)	missense	probably damaging	1.00
R7195:Vps13c	UTSW	9	67,945,825 (GRCm38)	missense	possibly damaging	0.95
R7244:Vps13c	UTSW	9	67,889,804 (GRCm38)	missense	probably benign	0.00
R7300:Vps13c	UTSW	9	67,940,544 (GRCm38)	missense	probably benign	0.20
R7314:Vps13c	UTSW	9	67,943,340 (GRCm38)	splice site	probably null
R7352:Vps13c	UTSW	9	67,840,446 (GRCm38)	missense	possibly damaging	0.94
R7368:Vps13c	UTSW	9	67,914,073 (GRCm38)	missense	probably benign	0.23
R7411:Vps13c	UTSW	9	67,972,001 (GRCm38)	missense	probably damaging	0.98
R7497:Vps13c	UTSW	9	67,840,479 (GRCm38)	missense	probably damaging	1.00
R7516:Vps13c	UTSW	9	67,955,007 (GRCm38)	missense	possibly damaging	0.89
R7638:Vps13c	UTSW	9	67,945,509 (GRCm38)	missense	probably damaging	1.00
R7732:Vps13c	UTSW	9	67,940,516 (GRCm38)	missense	probably damaging	0.97
R7748:Vps13c	UTSW	9	67,963,089 (GRCm38)	missense	probably benign	0.03
R7779:Vps13c	UTSW	9	67,881,422 (GRCm38)	missense	probably damaging	1.00
R7788:Vps13c	UTSW	9	67,940,483 (GRCm38)	missense	probably benign	0.01
R7894:Vps13c	UTSW	9	67,926,983 (GRCm38)	missense	probably damaging	0.99
R8163:Vps13c	UTSW	9	67,950,438 (GRCm38)	missense	probably benign	0.08
R8165:Vps13c	UTSW	9	67,858,790 (GRCm38)	missense	probably benign	0.00
R8202:Vps13c	UTSW	9	67,944,046 (GRCm38)	missense	probably damaging	0.98
R8235:Vps13c	UTSW	9	67,955,781 (GRCm38)	missense	probably benign	0.01
R8235:Vps13c	UTSW	9	67,927,396 (GRCm38)	missense	probably damaging	1.00
R8253:Vps13c	UTSW	9	67,943,488 (GRCm38)	nonsense	probably null
R8261:Vps13c	UTSW	9	67,954,980 (GRCm38)	missense	probably damaging	1.00
R8348:Vps13c	UTSW	9	67,879,103 (GRCm38)	missense	possibly damaging	0.79
R8547:Vps13c	UTSW	9	67,945,566 (GRCm38)	missense	probably damaging	1.00
R8734:Vps13c	UTSW	9	67,973,403 (GRCm38)	missense	probably damaging	1.00
R8806:Vps13c	UTSW	9	67,945,828 (GRCm38)	missense	probably damaging	1.00
R8807:Vps13c	UTSW	9	67,858,840 (GRCm38)	missense	probably damaging	0.99
R8813:Vps13c	UTSW	9	67,871,284 (GRCm38)	missense	probably damaging	1.00
R8883:Vps13c	UTSW	9	67,948,197 (GRCm38)	missense	probably benign	0.10
R8885:Vps13c	UTSW	9	67,943,454 (GRCm38)	missense	probably benign
R8899:Vps13c	UTSW	9	67,934,501 (GRCm38)	missense	probably damaging	0.98
R8970:Vps13c	UTSW	9	67,945,521 (GRCm38)	missense	probably benign	0.11
R9007:Vps13c	UTSW	9	67,937,724 (GRCm38)	missense	probably benign	0.00
R9026:Vps13c	UTSW	9	67,954,581 (GRCm38)	missense	probably damaging	1.00
R9029:Vps13c	UTSW	9	67,948,147 (GRCm38)	missense	probably damaging	0.98
R9057:Vps13c	UTSW	9	67,920,927 (GRCm38)	missense	probably benign	0.00
R9105:Vps13c	UTSW	9	67,870,799 (GRCm38)	intron	probably benign
R9130:Vps13c	UTSW	9	67,929,523 (GRCm38)	missense	probably damaging	1.00
R9286:Vps13c	UTSW	9	67,972,921 (GRCm38)	missense	probably benign	0.00
R9338:Vps13c	UTSW	9	67,951,695 (GRCm38)	missense	probably damaging	1.00
R9432:Vps13c	UTSW	9	67,922,855 (GRCm38)	missense	probably benign	0.02
R9460:Vps13c	UTSW	9	67,930,622 (GRCm38)	missense	possibly damaging	0.79
R9464:Vps13c	UTSW	9	67,951,392 (GRCm38)	missense	probably damaging	1.00
R9561:Vps13c	UTSW	9	67,965,512 (GRCm38)	missense	probably damaging	1.00
R9609:Vps13c	UTSW	9	67,934,549 (GRCm38)	missense	probably damaging	1.00
R9622:Vps13c	UTSW	9	67,949,433 (GRCm38)	missense	probably damaging	1.00
R9665:Vps13c	UTSW	9	67,955,743 (GRCm38)	nonsense	probably null
R9731:Vps13c	UTSW	9	67,919,244 (GRCm38)	missense	probably benign
R9763:Vps13c	UTSW	9	67,911,578 (GRCm38)	missense	probably benign	0.00
R9774:Vps13c	UTSW	9	67,884,591 (GRCm38)	missense	possibly damaging	0.85
R9798:Vps13c	UTSW	9	67,919,364 (GRCm38)	missense	probably damaging	1.00
U24488:Vps13c	UTSW	9	67,905,916 (GRCm38)	missense	probably benign	0.13
X0021:Vps13c	UTSW	9	67,937,781 (GRCm38)	missense	probably damaging	0.99
X0058:Vps13c	UTSW	9	67,927,419 (GRCm38)	missense	probably damaging	1.00
X0065:Vps13c	UTSW	9	67,873,863 (GRCm38)	missense	probably damaging	1.00
Z1088:Vps13c	UTSW	9	67,913,975 (GRCm38)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TCAATGTGTGCACTTACATGTG -3'
(R):5'- GGGCCTCAGAGAATTTAATTTCC -3'

Sequencing Primer
(F):5'- CATGTGCATGTTGTTCACTAAAC -3'
(R):5'- CCTTCTGGCCTTGATGAGAAC -3'

Posted On

2014-08-01