Incidental Mutation 'R0685:Bcr'
ID 218483
Institutional Source Beutler Lab
Gene Symbol Bcr
Ensembl Gene ENSMUSG00000009681
Gene Name BCR activator of RhoGEF and GTPase
Synonyms breakpoint cluster region, 5133400C09Rik
MMRRC Submission 038870-MU
Accession Numbers
Essential gene? Probably essential (E-score: 0.952) question?
Stock # R0685 (G1)
Quality Score 63
Status Validated
Chromosome 10
Chromosomal Location 74896424-75020753 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 74967475 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tryptophan to Arginine at position 570 (W570R)
Ref Sequence ENSEMBL: ENSMUSP00000126377 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000164107]
AlphaFold Q6PAJ1
Predicted Effect probably damaging
Transcript: ENSMUST00000164107
AA Change: W570R

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000126377
Gene: ENSMUSG00000009681
AA Change: W570R

DomainStartEndE-ValueType
Pfam:Bcr-Abl_Oligo 3 75 1.2e-44 PFAM
low complexity region 86 109 N/A INTRINSIC
low complexity region 121 147 N/A INTRINSIC
low complexity region 342 358 N/A INTRINSIC
low complexity region 371 389 N/A INTRINSIC
low complexity region 461 470 N/A INTRINSIC
RhoGEF 501 689 6.22e-51 SMART
PH 708 867 7.95e-8 SMART
C2 911 1016 2.85e-11 SMART
RhoGAP 1064 1248 6.42e-70 SMART
Meta Mutation Damage Score 0.8090 question?
Coding Region Coverage
  • 1x: 99.4%
  • 3x: 98.8%
  • 10x: 97.6%
  • 20x: 95.6%
Validation Efficiency 98% (89/91)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] A reciprocal translocation between chromosomes 22 and 9 produces the Philadelphia chromosome, which is often found in patients with chronic myelogenous leukemia. The chromosome 22 breakpoint for this translocation is located within the BCR gene. The translocation produces a fusion protein which is encoded by sequence from both BCR and ABL, the gene at the chromosome 9 breakpoint. Although the BCR-ABL fusion protein has been extensively studied, the function of the normal BCR gene product is not clear. The protein has serine/threonine kinase activity and is a GTPase-activating protein for p21rac. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygous null mutants are defective in hormonal and behavioral stress response regulation and prone to septic shock, whereas chimeric mice carrying a BCR-ABL fusion mutation mimicking human Philadelphia chromosome develop chronic myeloid leukemia. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 80 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700020N01Rik A G 10: 21,469,337 (GRCm39) D17G probably damaging Het
Abi3bp A G 16: 56,353,316 (GRCm39) T82A possibly damaging Het
Adgre4 A C 17: 56,099,035 (GRCm39) E180D probably benign Het
Ankrd28 G A 14: 31,465,407 (GRCm39) probably benign Het
Aoc3 A G 11: 101,227,273 (GRCm39) D382G possibly damaging Het
Apob C A 12: 8,060,742 (GRCm39) R3075S probably benign Het
Aqr A G 2: 113,971,458 (GRCm39) F459S probably damaging Het
Bloc1s5 C T 13: 38,787,895 (GRCm39) R163K probably benign Het
Bod1 A T 11: 31,619,267 (GRCm39) N101K possibly damaging Het
Bysl A T 17: 47,913,396 (GRCm39) S296T probably benign Het
Chl1 G A 6: 103,685,503 (GRCm39) probably null Het
Clstn1 G A 4: 149,731,312 (GRCm39) A885T probably benign Het
Cyp3a25 G T 5: 145,935,356 (GRCm39) P87T probably damaging Het
Dync1h1 T C 12: 110,623,626 (GRCm39) V3633A probably damaging Het
Dynlt5 T C 4: 102,859,735 (GRCm39) Y96H probably damaging Het
Elp4 C A 2: 105,622,622 (GRCm39) C241F possibly damaging Het
Fat4 T A 3: 39,055,327 (GRCm39) F4182Y probably benign Het
Gabbr2 G A 4: 46,787,521 (GRCm39) H381Y possibly damaging Het
Gm10577 G T 4: 100,877,515 (GRCm39) probably benign Het
Gm9955 G T 18: 24,842,314 (GRCm39) probably benign Het
Gstm5 T A 3: 107,804,635 (GRCm39) I73N probably damaging Het
Gypa T A 8: 81,223,331 (GRCm39) probably benign Het
Hectd2 T A 19: 36,546,831 (GRCm39) V64D probably damaging Het
Igkv10-95 T A 6: 68,657,543 (GRCm39) Y20N probably benign Het
Il15 T C 8: 83,064,188 (GRCm39) probably benign Het
Iqca1 C A 1: 90,070,453 (GRCm39) G133V probably null Het
Kiz C A 2: 146,697,978 (GRCm39) probably benign Het
Lcmt2 C A 2: 120,969,721 (GRCm39) S234I probably benign Het
Lilra5 A G 7: 4,244,956 (GRCm39) probably benign Het
Lin37 T C 7: 30,255,299 (GRCm39) E187G probably damaging Het
Lrrc37 T C 11: 103,507,714 (GRCm39) probably benign Het
Mcmdc2 T A 1: 9,982,039 (GRCm39) probably null Het
Mctp1 T C 13: 76,973,918 (GRCm39) probably null Het
Mdp1 C A 14: 55,896,726 (GRCm39) G112* probably null Het
Mmp15 T C 8: 96,098,762 (GRCm39) Y530H possibly damaging Het
Mtss2 T C 8: 111,454,029 (GRCm39) probably null Het
Muc5ac T C 7: 141,361,446 (GRCm39) S1586P probably benign Het
Nap1l5 A T 6: 58,883,757 (GRCm39) C66S possibly damaging Het
Ninl G T 2: 150,781,775 (GRCm39) Q1237K possibly damaging Het
Or5p70 A T 7: 107,994,470 (GRCm39) T48S possibly damaging Het
Or9m1b T C 2: 87,836,762 (GRCm39) E111G probably damaging Het
Orc6 T G 8: 86,027,783 (GRCm39) S37R possibly damaging Het
Papss1 A C 3: 131,288,854 (GRCm39) N119H possibly damaging Het
Phf13 A T 4: 152,076,069 (GRCm39) F278I probably damaging Het
Pole2 C A 12: 69,258,187 (GRCm39) A239S probably damaging Het
Ppt2 T C 17: 34,845,546 (GRCm39) D75G probably damaging Het
Psd2 A G 18: 36,136,044 (GRCm39) D443G possibly damaging Het
Psen1 C A 12: 83,761,594 (GRCm39) S132* probably null Het
Psme4 A G 11: 30,828,415 (GRCm39) T1812A probably damaging Het
Rasgrf1 T C 9: 89,797,535 (GRCm39) probably benign Het
Reep3 A G 10: 66,857,518 (GRCm39) probably benign Het
Rexo4 A T 2: 26,848,586 (GRCm39) probably benign Het
Rnf6 A C 5: 146,148,468 (GRCm39) S183R probably damaging Het
Scai A T 2: 38,993,749 (GRCm39) M297K probably damaging Het
Scn9a A T 2: 66,313,843 (GRCm39) S1947R probably benign Het
Sema6c T C 3: 95,080,021 (GRCm39) C772R possibly damaging Het
Skint7 T C 4: 111,837,542 (GRCm39) S107P possibly damaging Het
Slc24a3 A G 2: 145,448,715 (GRCm39) N420D probably benign Het
Smc1b T C 15: 84,955,021 (GRCm39) D1077G possibly damaging Het
Smg7 G A 1: 152,742,399 (GRCm39) P82L probably damaging Het
Sp3 A C 2: 72,801,342 (GRCm39) F268V probably damaging Het
Srms T C 2: 180,854,426 (GRCm39) D47G probably benign Het
Ss18 A C 18: 14,784,238 (GRCm39) M150R probably damaging Het
Taf5 G A 19: 47,063,293 (GRCm39) R281Q probably benign Het
Tars1 T C 15: 11,385,259 (GRCm39) K644R probably benign Het
Tinag C A 9: 76,859,285 (GRCm39) W441L probably damaging Het
Tmtc1 T C 6: 148,312,738 (GRCm39) S244G probably benign Het
Tpr T C 1: 150,309,476 (GRCm39) V1670A possibly damaging Het
Trpv3 A G 11: 73,187,640 (GRCm39) probably benign Het
Uhrf1 G T 17: 56,617,742 (GRCm39) V155L probably damaging Het
Ush2a G A 1: 188,132,475 (GRCm39) C899Y probably damaging Het
Vmn2r115 G A 17: 23,578,249 (GRCm39) R574H probably benign Het
Vmn2r63 T C 7: 42,577,434 (GRCm39) D368G probably benign Het
Vps13a A G 19: 16,758,105 (GRCm39) V10A probably damaging Het
Wbp11 A G 6: 136,791,636 (GRCm39) probably benign Het
Zcwpw1 A G 5: 137,797,854 (GRCm39) D145G probably benign Het
Zfp607a G A 7: 27,577,901 (GRCm39) V324I probably damaging Het
Zfp618 A G 4: 63,052,011 (GRCm39) I931V probably benign Het
Zfp821 T C 8: 110,451,174 (GRCm39) V389A possibly damaging Het
Zfp976 T A 7: 42,263,141 (GRCm39) H232L probably damaging Het
Other mutations in Bcr
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00090:Bcr APN 10 74,992,903 (GRCm39) unclassified probably benign
IGL00662:Bcr APN 10 75,003,932 (GRCm39) splice site probably benign
IGL01359:Bcr APN 10 74,995,611 (GRCm39) unclassified probably benign
IGL01737:Bcr APN 10 74,990,783 (GRCm39) missense probably damaging 0.99
IGL01908:Bcr APN 10 74,897,705 (GRCm39) missense possibly damaging 0.85
IGL01954:Bcr APN 10 75,011,173 (GRCm39) splice site probably null
IGL02169:Bcr APN 10 74,995,714 (GRCm39) missense probably benign 0.07
IGL02379:Bcr APN 10 74,992,980 (GRCm39) missense probably benign 0.02
IGL02380:Bcr APN 10 75,011,131 (GRCm39) missense probably benign
IGL02385:Bcr APN 10 74,981,235 (GRCm39) missense probably damaging 1.00
IGL02657:Bcr APN 10 74,990,796 (GRCm39) missense probably benign 0.00
IGL02682:Bcr APN 10 75,001,878 (GRCm39) missense possibly damaging 0.67
IGL02959:Bcr APN 10 74,996,222 (GRCm39) missense probably benign 0.44
accrual UTSW 10 74,897,338 (GRCm39) missense possibly damaging 0.77
Appreciation UTSW 10 74,896,957 (GRCm39) nonsense probably null
R0329:Bcr UTSW 10 75,017,466 (GRCm39) missense possibly damaging 0.88
R0330:Bcr UTSW 10 75,017,466 (GRCm39) missense possibly damaging 0.88
R0376:Bcr UTSW 10 74,981,159 (GRCm39) missense probably damaging 1.00
R0828:Bcr UTSW 10 74,993,039 (GRCm39) unclassified probably benign
R0892:Bcr UTSW 10 74,960,895 (GRCm39) missense probably benign 0.00
R1143:Bcr UTSW 10 74,897,197 (GRCm39) missense probably benign 0.00
R1416:Bcr UTSW 10 74,897,338 (GRCm39) missense possibly damaging 0.77
R1479:Bcr UTSW 10 74,896,957 (GRCm39) nonsense probably null
R1611:Bcr UTSW 10 74,961,034 (GRCm39) splice site probably null
R1636:Bcr UTSW 10 74,966,898 (GRCm39) missense probably damaging 1.00
R1837:Bcr UTSW 10 75,003,932 (GRCm39) splice site probably benign
R2341:Bcr UTSW 10 74,966,944 (GRCm39) missense probably damaging 1.00
R2343:Bcr UTSW 10 74,981,254 (GRCm39) missense probably benign 0.03
R3753:Bcr UTSW 10 74,971,772 (GRCm39) missense probably benign 0.05
R4273:Bcr UTSW 10 74,960,943 (GRCm39) missense probably damaging 0.97
R4624:Bcr UTSW 10 74,989,752 (GRCm39) missense probably damaging 1.00
R4723:Bcr UTSW 10 75,011,161 (GRCm39) missense probably benign 0.45
R5013:Bcr UTSW 10 74,960,898 (GRCm39) missense probably benign 0.00
R5359:Bcr UTSW 10 75,001,917 (GRCm39) missense probably damaging 0.99
R5458:Bcr UTSW 10 74,990,792 (GRCm39) missense probably benign
R5982:Bcr UTSW 10 75,012,248 (GRCm39) missense probably benign 0.08
R5988:Bcr UTSW 10 75,011,167 (GRCm39) missense probably benign 0.01
R6220:Bcr UTSW 10 74,898,124 (GRCm39) missense probably benign
R6827:Bcr UTSW 10 74,966,896 (GRCm39) missense probably damaging 1.00
R6886:Bcr UTSW 10 74,989,769 (GRCm39) missense probably damaging 1.00
R6990:Bcr UTSW 10 74,966,868 (GRCm39) missense possibly damaging 0.80
R7003:Bcr UTSW 10 74,897,393 (GRCm39) missense probably benign 0.08
R7424:Bcr UTSW 10 74,992,932 (GRCm39) missense probably benign
R7443:Bcr UTSW 10 74,978,968 (GRCm39) critical splice donor site probably null
R7488:Bcr UTSW 10 74,996,162 (GRCm39) missense possibly damaging 0.80
R8232:Bcr UTSW 10 75,001,883 (GRCm39) missense probably damaging 1.00
R8360:Bcr UTSW 10 74,981,271 (GRCm39) missense probably damaging 0.96
R8992:Bcr UTSW 10 74,967,404 (GRCm39) missense probably damaging 1.00
R9362:Bcr UTSW 10 74,993,023 (GRCm39) missense probably benign 0.19
R9487:Bcr UTSW 10 74,967,431 (GRCm39) missense probably damaging 1.00
R9610:Bcr UTSW 10 74,990,745 (GRCm39) nonsense probably null
R9610:Bcr UTSW 10 74,990,743 (GRCm39) missense probably damaging 1.00
R9611:Bcr UTSW 10 74,990,745 (GRCm39) nonsense probably null
R9611:Bcr UTSW 10 74,990,743 (GRCm39) missense probably damaging 1.00
R9630:Bcr UTSW 10 74,966,950 (GRCm39) missense probably damaging 1.00
R9662:Bcr UTSW 10 75,011,152 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- GAATGAAGCCATTTCACCTGTGCC -3'
(R):5'- AACGCCAAGCAACACTGTAGGG -3'

Sequencing Primer
(F):5'- ACCTGTGCCATCCTCCAG -3'
(R):5'- TTTGGCACCAAAGGTACTCAG -3'
Posted On 2014-08-11