Mutagenetix > Incidental Mutation

Incidental Mutation 'R1982:Slit2'

219907

Institutional Source

Beutler Lab

Gene Symbol

Slit2

Ensembl Gene

ENSMUSG00000031558

Gene Name

slit guidance ligand 2

Synonyms

Drad-1, Slil3, E130320P19Rik, E030015M03Rik

MMRRC Submission

039994-MU

Accession Numbers

Ncbi RefSeq: NM_178804.3; MGI: 1315205

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R1982 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

47983138-48307733 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 48249836 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Valine to Methionine at position 870 (V870M)

Ref Sequence

ENSEMBL: ENSMUSP00000133912 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000033967] [ENSMUST00000170109] [ENSMUST00000172493] [ENSMUST00000173107] [ENSMUST00000174313] [ENSMUST00000174421]

AlphaFold

Q9R1B9

Predicted Effect

silent
Transcript: ENSMUST00000033967

SMART Domains

Protein: ENSMUSP00000033967
Gene: ENSMUSG00000031558

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
LRRNT	27	59	6.53e-9	SMART
LRR	53	77	1.41e2	SMART
LRR_TYP	78	101	1.79e-2	SMART
LRR	102	125	2.45e0	SMART
LRR	126	149	9.96e-1	SMART
LRR	154	173	1.29e2	SMART
LRR_TYP	174	197	2.05e-2	SMART
LRRCT	209	258	3.42e-9	SMART
LRRNT	272	304	4.55e-8	SMART
LRR	298	322	3e1	SMART
LRR_TYP	323	346	1.95e-3	SMART
LRR_TYP	347	370	2.24e-3	SMART
LRR	371	394	1.31e0	SMART
LRR	395	418	2.49e-1	SMART
LRRCT	430	479	1.88e-6	SMART
LRRNT	497	529	1.45e-6	SMART
LRR_TYP	549	572	1.38e-3	SMART
LRR	597	620	9.96e-1	SMART
LRR_TYP	621	644	2.71e-2	SMART
LRRCT	656	705	3.56e-7	SMART
LRRNT	718	750	3.69e-8	SMART
LRR	768	791	7.36e0	SMART
LRR_TYP	792	815	5.59e-4	SMART
LRR_TYP	816	839	7.9e-4	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000170109
AA Change: V878M

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000127615
Gene: ENSMUSG00000031558
AA Change: V878M

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
LRRNT	27	59	6.53e-9	SMART
LRR	53	77	1.41e2	SMART
LRR_TYP	78	101	1.79e-2	SMART
LRR	102	125	2.45e0	SMART
LRR	126	149	9.96e-1	SMART
LRR	154	173	1.29e2	SMART
LRR_TYP	174	197	2.05e-2	SMART
LRRCT	209	258	3.42e-9	SMART
LRRNT	272	304	4.55e-8	SMART
LRR	298	322	3e1	SMART
LRR_TYP	323	346	1.95e-3	SMART
LRR_TYP	347	370	2.24e-3	SMART
LRR	371	394	1.31e0	SMART
LRR	395	418	2.49e-1	SMART
LRRCT	430	479	1.88e-6	SMART
LRRNT	497	529	1.45e-6	SMART
LRR_TYP	549	572	1.38e-3	SMART
LRR	597	620	9.96e-1	SMART
LRR_TYP	621	644	2.71e-2	SMART
LRRCT	656	705	3.56e-7	SMART
LRRNT	718	750	3.69e-8	SMART
LRR	768	791	7.36e0	SMART
LRR_TYP	792	815	5.59e-4	SMART
LRR_TYP	816	839	7.9e-4	SMART
LRRCT	851	900	3.9e-13	SMART
EGF	913	947	3.73e-5	SMART
EGF	952	988	4.35e-6	SMART
EGF_CA	990	1026	2.21e-7	SMART
FOLN	993	1015	5.84e1	SMART
EGF	1031	1066	1.07e-5	SMART
EGF_CA	1068	1104	3.97e-9	SMART
FOLN	1116	1138	2.22e0	SMART
EGF	1116	1149	1.62e-5	SMART
LamG	1172	1308	4.82e-39	SMART
EGF	1327	1360	3.68e-4	SMART
EGF	1366	1399	3.88e-3	SMART
FOLN	1407	1429	3.34e0	SMART
EGF	1407	1440	4.46e-3	SMART
CT	1451	1520	4.23e-4	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000172484

Predicted Effect

probably damaging
Transcript: ENSMUST00000172493
AA Change: V118M

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)

SMART Domains

Protein: ENSMUSP00000134655
Gene: ENSMUSG00000031558
AA Change: V118M

Domain	Start	End	E-Value	Type
LRR	20	43	3.1e-2	SMART
LRR_TYP	44	67	2.4e-6	SMART
LRR_TYP	68	91	3.2e-6	SMART
LRRCT	103	152	1.8e-15	SMART
EGF	176	210	1.8e-7	SMART
EGF	215	251	2.1e-8	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000173107
AA Change: V866M

PolyPhen 2 Score 0.956 (Sensitivity: 0.79; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000133840
Gene: ENSMUSG00000031558
AA Change: V866M

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
LRRNT	27	59	6.53e-9	SMART
LRR	53	77	1.41e2	SMART
LRR_TYP	78	101	1.79e-2	SMART
LRR	102	125	2.45e0	SMART
LRR	126	149	9.96e-1	SMART
LRR	154	173	1.29e2	SMART
LRR_TYP	174	197	2.05e-2	SMART
LRRCT	209	258	3.42e-9	SMART
LRRNT	272	304	4.55e-8	SMART
LRR	298	322	3e1	SMART
LRR_TYP	323	346	1.95e-3	SMART
LRR_TYP	347	370	2.24e-3	SMART
LRR	371	394	1.31e0	SMART
LRR	395	418	2.49e-1	SMART
LRRCT	430	479	1.88e-6	SMART
LRRNT	505	537	1.45e-6	SMART
LRR_TYP	557	580	1.38e-3	SMART
LRR	605	628	9.96e-1	SMART
LRR_TYP	629	652	2.71e-2	SMART
LRRCT	664	713	3.56e-7	SMART
LRRNT	726	758	3.69e-8	SMART
LRR	776	799	7.36e0	SMART
LRR_TYP	800	823	5.59e-4	SMART
LRR_TYP	824	847	7.9e-4	SMART
LRRCT	859	908	3.9e-13	SMART
EGF	921	955	3.73e-5	SMART
EGF	960	996	4.35e-6	SMART
EGF_CA	998	1034	2.21e-7	SMART
FOLN	1001	1023	5.84e1	SMART
EGF	1039	1074	1.07e-5	SMART
EGF_CA	1076	1112	3.97e-9	SMART
FOLN	1124	1146	2.22e0	SMART
EGF	1124	1157	1.62e-5	SMART
LamG	1180	1316	4.82e-39	SMART
EGF	1335	1368	3.68e-4	SMART
EGF	1374	1407	3.88e-3	SMART
FOLN	1415	1437	3.34e0	SMART
EGF	1415	1448	4.46e-3	SMART
CT	1459	1528	4.23e-4	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000173671

Predicted Effect

probably damaging
Transcript: ENSMUST00000174313
AA Change: V870M

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000133912
Gene: ENSMUSG00000031558
AA Change: V870M

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
LRRNT	27	59	6.53e-9	SMART
LRR	53	77	1.41e2	SMART
LRR_TYP	78	101	1.79e-2	SMART
LRR	102	125	2.45e0	SMART
LRR	126	149	9.96e-1	SMART
LRR	154	173	1.29e2	SMART
LRR_TYP	174	197	2.05e-2	SMART
LRRCT	209	258	3.42e-9	SMART
LRRNT	276	308	4.55e-8	SMART
LRR	302	326	3e1	SMART
LRR_TYP	327	350	1.95e-3	SMART
LRR_TYP	351	374	2.24e-3	SMART
LRR	375	398	1.31e0	SMART
LRR	399	422	2.49e-1	SMART
LRRCT	434	483	1.88e-6	SMART
LRRNT	501	533	1.45e-6	SMART
LRR_TYP	553	576	1.38e-3	SMART
LRR	601	624	9.96e-1	SMART
LRR_TYP	625	648	2.71e-2	SMART
LRRCT	660	709	3.56e-7	SMART
LRRNT	722	754	3.69e-8	SMART
LRR	772	795	7.36e0	SMART
LRR_TYP	796	819	5.59e-4	SMART
LRR_TYP	820	843	7.9e-4	SMART
LRRCT	855	904	3.9e-13	SMART
EGF	917	951	3.73e-5	SMART
EGF	956	992	4.35e-6	SMART
EGF_CA	994	1030	2.21e-7	SMART
FOLN	997	1019	5.84e1	SMART
EGF	1035	1070	1.07e-5	SMART
EGF_CA	1072	1108	3.97e-9	SMART
FOLN	1120	1142	2.22e0	SMART
EGF	1120	1153	1.62e-5	SMART
LamG	1176	1312	4.82e-39	SMART
EGF	1331	1364	3.68e-4	SMART
EGF	1370	1403	3.88e-3	SMART
FOLN	1411	1433	3.34e0	SMART
EGF	1411	1444	4.46e-3	SMART
CT	1455	1524	4.23e-4	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000174421
AA Change: V878M

PolyPhen 2 Score 0.968 (Sensitivity: 0.77; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000134263
Gene: ENSMUSG00000031558
AA Change: V878M

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
LRRNT	27	59	6.53e-9	SMART
LRR	53	77	1.41e2	SMART
LRR_TYP	78	101	1.79e-2	SMART
LRR	102	125	2.45e0	SMART
LRR	126	149	9.96e-1	SMART
LRR	154	173	1.29e2	SMART
LRR_TYP	174	197	2.05e-2	SMART
LRRCT	209	258	3.42e-9	SMART
LRRNT	276	308	4.55e-8	SMART
LRR	302	326	3e1	SMART
LRR_TYP	327	350	1.95e-3	SMART
LRR_TYP	351	374	2.24e-3	SMART
LRR	375	398	1.31e0	SMART
LRR	399	422	2.49e-1	SMART
LRRCT	434	483	1.88e-6	SMART
LRRNT	509	541	1.45e-6	SMART
LRR_TYP	561	584	1.38e-3	SMART
LRR	609	632	9.96e-1	SMART
LRR_TYP	633	656	2.71e-2	SMART
LRRCT	668	717	3.56e-7	SMART
LRRNT	730	762	3.69e-8	SMART
LRR	780	803	7.36e0	SMART
LRR_TYP	804	827	5.59e-4	SMART
LRR_TYP	828	851	7.9e-4	SMART
LRRCT	863	912	3.9e-13	SMART
EGF	925	959	3.73e-5	SMART
EGF	964	1000	4.35e-6	SMART
EGF_CA	1002	1047	4.74e-7	SMART
FOLN	1005	1027	5.84e1	SMART
EGF	1052	1087	1.07e-5	SMART
EGF_CA	1089	1125	3.97e-9	SMART
FOLN	1137	1159	2.22e0	SMART
EGF	1137	1170	1.62e-5	SMART
LamG	1193	1329	4.82e-39	SMART
EGF	1348	1381	3.68e-4	SMART
EGF	1387	1420	3.88e-3	SMART
FOLN	1428	1450	3.34e0	SMART
EGF	1428	1461	4.46e-3	SMART
CT	1472	1541	4.23e-4	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000199024

Coding Region Coverage

1x: 99.2%
3x: 98.5%
10x: 96.9%
20x: 94.5%

Validation Efficiency

MGI Phenotype

Strain: 2179460
FUNCTION: The protein encoded by this gene is a member of the Slit family of secreted glycoproteins, which function as ligands for the Robo family of immunoglobulin receptors. Slit proteins play highly conserved roles in axon guidance and neuronal migration and may also have functions during other cell migration processes including leukocyte migration. In mammals, members of the slit family are characterized by an N-terminal signal peptide, four leucine-rich repeats, nine epidermal growth factor repeats, and a C-terminal cysteine knot. Mice deficient for this gene exhibit abnormal axonal projections in the embryonic forebrain and develop supernumerary uretic buds that maintain improper connections to the nephric duct. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2015]
PHENOTYPE: Homozygous mutants display perinatal lethality, abnormal ureteric bud development, multiple fused kidneys, multiple ureters, and hydroureter. [provided by MGI curators]

Allele List at MGI

All alleles(4) : Targeted(4)

Other mutations in this stock

Total: 89 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930415L06Rik	A	T	X: 89,931,445	V382E	probably damaging	Het
Aatk	G	T	11: 120,013,514	P252Q	probably damaging	Het
Adamts4	T	C	1: 171,258,934	V765A	probably benign	Het
Agfg2	A	T	5: 137,664,253	V184E	possibly damaging	Het
Alas1	A	T	9: 106,238,185	I48N	probably damaging	Het
Anks1	T	C	17: 27,985,121	V181A	probably damaging	Het
Anxa8	A	T	14: 34,096,570	R261S	probably damaging	Het
Aqp4	T	C	18: 15,393,551	D291G	probably damaging	Het
Atrn	A	G	2: 130,970,222	R696G	probably benign	Het
Barx2	A	C	9: 31,913,012	I27S	probably damaging	Het
Btnl1	A	T	17: 34,379,751	I114L	possibly damaging	Het
Casq1	C	T	1: 172,215,530	A200T	probably damaging	Het
Ccdc33	T	A	9: 58,117,168	E225D	probably benign	Het
Cd84	C	A	1: 171,884,585		probably null	Het
Ceacam9	T	G	7: 16,725,307	L177R	probably benign	Het
Cenpi	T	A	X: 134,318,033	F161L	possibly damaging	Het
Cep63	T	C	9: 102,602,880	K251E	probably damaging	Het
Cetn3	A	G	13: 81,784,697	E25G	probably damaging	Het
Crybg3	T	C	16: 59,544,125	D2378G	possibly damaging	Het
Ddx19b	T	C	8: 111,009,343	T357A	possibly damaging	Het
Dpep2	A	C	8: 105,989,455	Y266*	probably null	Het
Dqx1	G	A	6: 83,058,577	D24N	probably damaging	Het
Dsg4	A	T	18: 20,471,212	Y912F	probably damaging	Het
Fam71f2	A	G	6: 29,285,922	T69A	probably benign	Het
Fezf2	G	T	14: 12,344,405	P261T	probably benign	Het
Fmo1	T	C	1: 162,839,756	I163M	possibly damaging	Het
Gatad2a	G	A	8: 69,913,132	R428*	probably null	Het
Gfpt1	T	A	6: 87,054,630	F85I	possibly damaging	Het
Gimap7	A	T	6: 48,724,241	I254F	possibly damaging	Het
Glcci1	T	C	6: 8,592,980	S261P	probably damaging	Het
Glis3	A	T	19: 28,531,274	F437I	probably damaging	Het
Glp1r	C	A	17: 30,925,627	S258*	probably null	Het
Gm13023	C	A	4: 143,795,150	H445Q	probably benign	Het
Gm7030	T	A	17: 36,128,722	D122V	probably damaging	Het
Gpt2	C	T	8: 85,516,203	A288V	possibly damaging	Het
Grin2c	G	T	11: 115,260,905	S76R	possibly damaging	Het
Guf1	T	A	5: 69,567,226	Y447*	probably null	Het
Hectd1	A	C	12: 51,785,841	L916V	probably damaging	Het
Hnf4g	A	G	3: 3,638,208	K96E	probably damaging	Het
Hsh2d	G	A	8: 72,200,460	D229N	probably benign	Het
Ifi207	T	G	1: 173,735,239	M114L	probably benign	Het
Ifi35	A	T	11: 101,458,286	E252V	probably damaging	Het
Igsf9b	G	A	9: 27,322,239	R345H	possibly damaging	Het
Itih3	T	C	14: 30,923,583		probably benign	Het
Kcnh8	GAGACCAACGAGCAGCTGATGCTTCAGA	GAGA	17: 52,725,906	74	probably benign	Het
Kidins220	A	T	12: 25,051,194	M1252L	probably benign	Het
Kifap3	T	A	1: 163,862,022	L525*	probably null	Het
Limk2	A	T	11: 3,355,461	D35E	probably benign	Het
Lrrc37a	G	A	11: 103,498,966	P1878S	probably benign	Het
Mansc4	T	A	6: 147,075,675	I148F	probably benign	Het
Mei1	A	G	15: 82,103,312	N859S	probably benign	Het
Mib1	A	G	18: 10,812,064	D987G	probably damaging	Het
Mroh8	A	G	2: 157,271,975	V132A	possibly damaging	Het
Npnt	T	C	3: 132,948,132	I29M	probably benign	Het
Nrap	T	C	19: 56,384,105	D138G	probably damaging	Het
Olfr1	A	T	11: 73,395,092	I310N	probably benign	Het
Olfr5	T	C	7: 6,480,932	M75V	probably benign	Het
Olfr512	A	G	7: 108,713,695	Y102C	probably damaging	Het
Olfr91	T	A	17: 37,093,808	E22V	probably damaging	Het
Osbpl5	A	C	7: 143,741,671		probably null	Het
Pcna-ps2	T	C	19: 9,283,683	V102A	possibly damaging	Het
Pik3c2g	T	C	6: 139,622,548	S221P	probably damaging	Het
Plppr3	A	G	10: 79,866,425	I271T	probably damaging	Het
Prkar1b	C	T	5: 139,127,643	A41T	probably benign	Het
Prkcsh	A	G	9: 22,012,868	D458G	probably damaging	Het
Prr14	G	T	7: 127,475,490	R398L	possibly damaging	Het
Ptafr	A	G	4: 132,579,985	R229G	probably damaging	Het
Rbp3	T	C	14: 33,954,545	F150S	probably damaging	Het
Rel	C	T	11: 23,742,761	G424D	probably benign	Het
Rlf	T	C	4: 121,150,112	Y557C	probably damaging	Het
Samt3	A	C	X: 86,047,134	M211L	probably benign	Het
Selenop	A	T	15: 3,275,694	I111F	probably damaging	Het
Slc2a2	G	A	3: 28,717,441	M173I	probably benign	Het
Slc43a1	G	T	2: 84,856,889	G361V	possibly damaging	Het
Ssxb10	A	G	X: 8,331,019	D77G	probably benign	Het
Stk32b	T	A	5: 37,649,114	I29F	probably damaging	Het
Stra6l	T	A	4: 45,867,237	C161*	probably null	Het
Tecpr2	T	A	12: 110,954,785	M1264K	probably benign	Het
Tfap2c	A	T	2: 172,557,236	I468F	probably damaging	Het
Ticam1	C	T	17: 56,271,555	R180H	probably damaging	Het
Tlr4	T	A	4: 66,841,035	N688K	probably benign	Het
Tmem35b	A	T	4: 127,126,053		probably benign	Het
Ugt2b34	T	C	5: 86,906,313	E203G	probably damaging	Het
Vegfa	A	C	17: 46,018,860	*393G	probably null	Het
Vmn2r16	T	C	5: 109,364,024	V699A	probably benign	Het
Zfp324	T	C	7: 12,971,218	S445P	probably damaging	Het
Zfp982	T	A	4: 147,512,592	C135*	probably null	Het
Zfp990	A	C	4: 145,536,869	N146H	probably damaging	Het
Zfyve26	A	G	12: 79,255,243	Y431H	possibly damaging	Het

Other mutations in Slit2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00791:Slit2	APN	5	48304032	missense	possibly damaging	0.86
IGL00809:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00811:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00813:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00815:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00816:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00817:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00819:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00820:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL00822:Slit2	APN	5	47989151	missense	possibly damaging	0.88
IGL01077:Slit2	APN	5	48217443	splice site	probably null
IGL01375:Slit2	APN	5	48281714	splice site	probably benign
IGL01481:Slit2	APN	5	48302931	missense	probably benign	0.05
IGL01934:Slit2	APN	5	48238405	missense	possibly damaging	0.93
IGL01992:Slit2	APN	5	48238417	missense	probably benign	0.01
IGL02315:Slit2	APN	5	47987871	missense	probably damaging	0.98
IGL02328:Slit2	APN	5	48230304	missense	probably damaging	1.00
IGL02366:Slit2	APN	5	48304068	missense	possibly damaging	0.53
IGL02526:Slit2	APN	5	48304223	nonsense	probably null
IGL02852:Slit2	APN	5	48244672	missense	probably damaging	1.00
IGL02887:Slit2	APN	5	48217474	missense	probably benign	0.44
IGL03123:Slit2	APN	5	48211339	missense	probably damaging	1.00
IGL03182:Slit2	APN	5	48220053	missense	possibly damaging	0.77
P0025:Slit2	UTSW	5	48304035	missense	probably damaging	0.96
R0032:Slit2	UTSW	5	48256856	missense	probably damaging	0.99
R0032:Slit2	UTSW	5	48256856	missense	probably damaging	0.99
R0055:Slit2	UTSW	5	48281726	nonsense	probably null
R0055:Slit2	UTSW	5	48281726	nonsense	probably null
R0267:Slit2	UTSW	5	48182331	splice site	probably benign
R0552:Slit2	UTSW	5	48238379	missense	probably damaging	1.00
R0610:Slit2	UTSW	5	48275674	missense	possibly damaging	0.77
R0883:Slit2	UTSW	5	48245573	splice site	probably benign
R1390:Slit2	UTSW	5	48217490	missense	probably benign	0.06
R1442:Slit2	UTSW	5	48238383	missense	probably damaging	0.96
R1453:Slit2	UTSW	5	48257051	missense	possibly damaging	0.88
R1508:Slit2	UTSW	5	48192249	missense	probably damaging	0.98
R1639:Slit2	UTSW	5	48259654	missense	probably damaging	1.00
R1705:Slit2	UTSW	5	48189472	missense	probably damaging	0.99
R1828:Slit2	UTSW	5	48304030	missense	probably damaging	1.00
R1897:Slit2	UTSW	5	48238423	missense	probably damaging	1.00
R1908:Slit2	UTSW	5	48281988	missense	probably damaging	1.00
R1919:Slit2	UTSW	5	48191016	unclassified	probably benign
R2013:Slit2	UTSW	5	48302490	missense	probably damaging	1.00
R2136:Slit2	UTSW	5	48304225	missense	probably benign	0.03
R2655:Slit2	UTSW	5	48189575	missense	possibly damaging	0.88
R3402:Slit2	UTSW	5	48283421	missense	probably damaging	0.98
R3724:Slit2	UTSW	5	48256883	critical splice donor site	probably null
R4176:Slit2	UTSW	5	48237244	splice site	probably null
R4306:Slit2	UTSW	5	48302783	missense	possibly damaging	0.83
R4397:Slit2	UTSW	5	48220081	critical splice donor site	probably null
R4525:Slit2	UTSW	5	48249873	missense	probably damaging	1.00
R4688:Slit2	UTSW	5	48257003	splice site	probably null
R5026:Slit2	UTSW	5	48256805	missense	probably damaging	0.99
R5138:Slit2	UTSW	5	48281967	missense	probably damaging	1.00
R5465:Slit2	UTSW	5	48249912	missense	probably damaging	1.00
R5471:Slit2	UTSW	5	48189555	missense	probably damaging	1.00
R5699:Slit2	UTSW	5	48220991	critical splice donor site	probably null
R5735:Slit2	UTSW	5	48259616	missense	probably damaging	1.00
R5834:Slit2	UTSW	5	48259647	missense	probably damaging	1.00
R5967:Slit2	UTSW	5	47985164	missense	probably damaging	0.99
R6150:Slit2	UTSW	5	48304174	missense	probably damaging	1.00
R6219:Slit2	UTSW	5	48302428	missense	possibly damaging	0.53
R6344:Slit2	UTSW	5	48219681	missense	probably benign	0.07
R6408:Slit2	UTSW	5	47984986	unclassified	probably benign
R6479:Slit2	UTSW	5	48231989	missense	probably damaging	1.00
R6526:Slit2	UTSW	5	48304167	missense	probably damaging	0.99
R6959:Slit2	UTSW	5	48238385	missense	possibly damaging	0.83
R7139:Slit2	UTSW	5	48244683	missense	probably benign	0.19
R7201:Slit2	UTSW	5	48237285	missense	probably null	0.85
R7472:Slit2	UTSW	5	48256838	missense	probably damaging	0.97
R7491:Slit2	UTSW	5	48219994	missense	probably benign	0.18
R7566:Slit2	UTSW	5	48249897	missense	probably damaging	0.99
R7622:Slit2	UTSW	5	47985205	missense	probably damaging	0.98
R7831:Slit2	UTSW	5	48244683	missense	probably benign	0.19
R7870:Slit2	UTSW	5	48302307	missense	probably damaging	0.99
R7899:Slit2	UTSW	5	48247185	missense	possibly damaging	0.89
R7969:Slit2	UTSW	5	48304036	missense	possibly damaging	0.47
R7984:Slit2	UTSW	5	48176123	intron	probably benign
R8021:Slit2	UTSW	5	48302492	nonsense	probably null
R8253:Slit2	UTSW	5	48275671	missense	probably benign	0.00
R8321:Slit2	UTSW	5	48230267	missense	probably damaging	1.00
R8426:Slit2	UTSW	5	48224763	missense	probably benign	0.00
R8513:Slit2	UTSW	5	48224708	nonsense	probably null
R8756:Slit2	UTSW	5	48302487	nonsense	probably null
R8796:Slit2	UTSW	5	48302848	missense	probably benign	0.01
R8799:Slit2	UTSW	5	48304182	missense	possibly damaging	0.73
R8947:Slit2	UTSW	5	48249798	missense	probably damaging	1.00
R9005:Slit2	UTSW	5	48302518	missense	possibly damaging	0.73
R9173:Slit2	UTSW	5	48219943	missense	probably damaging	0.98
R9310:Slit2	UTSW	5	48192226	missense	possibly damaging	0.59
R9365:Slit2	UTSW	5	48304192	missense	probably benign	0.04
Z1088:Slit2	UTSW	5	48302353	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GAAAGTAGAAATCTGCAGTTTCTCC -3'
(R):5'- AAGATACTGCCACATCTGCG -3'

Sequencing Primer
(F):5'- AGAAATCTGCAGTTTCTCCATTTTC -3'
(R):5'- CCACATCTGCGGTGATTAATG -3'

Posted On

2014-08-25