Mutagenetix > Incidental Mutation

Incidental Mutation 'R1982:Olfr1'

219987

Institutional Source

Beutler Lab

Gene Symbol

Olfr1

Ensembl Gene

ENSMUSG00000069823

Gene Name

olfactory receptor 1

Synonyms

I54, MOR135-13, GA_x6K02T2P1NL-3556334-3555390

MMRRC Submission

039994-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.193) question?

Stock #

R1982 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

73393010-73399614 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 73395092 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Asparagine at position 310 (I310N)

Ref Sequence

ENSEMBL: ENSMUSP00000113707 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000120303] [ENSMUST00000131253] [ENSMUST00000134011]

AlphaFold

Q8VGI1

Predicted Effect

probably benign
Transcript: ENSMUST00000120303
AA Change: I310N

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)

SMART Domains

Protein: ENSMUSP00000113707
Gene: ENSMUSG00000069823
AA Change: I310N

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	308	8.7e-60	PFAM
Pfam:7tm_1	41	290	2e-27	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000131253

SMART Domains

Protein: ENSMUSP00000120899
Gene: ENSMUSG00000069823

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srx	31	184	1.2e-6	PFAM
Pfam:7TM_GPCR_Srsx	35	171	6.1e-8	PFAM
Pfam:7tm_1	41	191	3.6e-30	PFAM
Pfam:7tm_4	139	196	1.4e-13	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000134011

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000206193

Coding Region Coverage

1x: 99.2%
3x: 98.5%
10x: 96.9%
20x: 94.5%

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 89 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930415L06Rik	A	T	X: 89,931,445	V382E	probably damaging	Het
Aatk	G	T	11: 120,013,514	P252Q	probably damaging	Het
Adamts4	T	C	1: 171,258,934	V765A	probably benign	Het
Agfg2	A	T	5: 137,664,253	V184E	possibly damaging	Het
Alas1	A	T	9: 106,238,185	I48N	probably damaging	Het
Anks1	T	C	17: 27,985,121	V181A	probably damaging	Het
Anxa8	A	T	14: 34,096,570	R261S	probably damaging	Het
Aqp4	T	C	18: 15,393,551	D291G	probably damaging	Het
Atrn	A	G	2: 130,970,222	R696G	probably benign	Het
Barx2	A	C	9: 31,913,012	I27S	probably damaging	Het
Btnl1	A	T	17: 34,379,751	I114L	possibly damaging	Het
Casq1	C	T	1: 172,215,530	A200T	probably damaging	Het
Ccdc33	T	A	9: 58,117,168	E225D	probably benign	Het
Cd84	C	A	1: 171,884,585		probably null	Het
Ceacam9	T	G	7: 16,725,307	L177R	probably benign	Het
Cenpi	T	A	X: 134,318,033	F161L	possibly damaging	Het
Cep63	T	C	9: 102,602,880	K251E	probably damaging	Het
Cetn3	A	G	13: 81,784,697	E25G	probably damaging	Het
Crybg3	T	C	16: 59,544,125	D2378G	possibly damaging	Het
Ddx19b	T	C	8: 111,009,343	T357A	possibly damaging	Het
Dpep2	A	C	8: 105,989,455	Y266*	probably null	Het
Dqx1	G	A	6: 83,058,577	D24N	probably damaging	Het
Dsg4	A	T	18: 20,471,212	Y912F	probably damaging	Het
Fam71f2	A	G	6: 29,285,922	T69A	probably benign	Het
Fezf2	G	T	14: 12,344,405	P261T	probably benign	Het
Fmo1	T	C	1: 162,839,756	I163M	possibly damaging	Het
Gatad2a	G	A	8: 69,913,132	R428*	probably null	Het
Gfpt1	T	A	6: 87,054,630	F85I	possibly damaging	Het
Gimap7	A	T	6: 48,724,241	I254F	possibly damaging	Het
Glcci1	T	C	6: 8,592,980	S261P	probably damaging	Het
Glis3	A	T	19: 28,531,274	F437I	probably damaging	Het
Glp1r	C	A	17: 30,925,627	S258*	probably null	Het
Gm13023	C	A	4: 143,795,150	H445Q	probably benign	Het
Gm7030	T	A	17: 36,128,722	D122V	probably damaging	Het
Gpt2	C	T	8: 85,516,203	A288V	possibly damaging	Het
Grin2c	G	T	11: 115,260,905	S76R	possibly damaging	Het
Guf1	T	A	5: 69,567,226	Y447*	probably null	Het
Hectd1	A	C	12: 51,785,841	L916V	probably damaging	Het
Hnf4g	A	G	3: 3,638,208	K96E	probably damaging	Het
Hsh2d	G	A	8: 72,200,460	D229N	probably benign	Het
Ifi207	T	G	1: 173,735,239	M114L	probably benign	Het
Ifi35	A	T	11: 101,458,286	E252V	probably damaging	Het
Igsf9b	G	A	9: 27,322,239	R345H	possibly damaging	Het
Itih3	T	C	14: 30,923,583		probably benign	Het
Kcnh8	GAGACCAACGAGCAGCTGATGCTTCAGA	GAGA	17: 52,725,906	74	probably benign	Het
Kidins220	A	T	12: 25,051,194	M1252L	probably benign	Het
Kifap3	T	A	1: 163,862,022	L525*	probably null	Het
Limk2	A	T	11: 3,355,461	D35E	probably benign	Het
Lrrc37a	G	A	11: 103,498,966	P1878S	probably benign	Het
Mansc4	T	A	6: 147,075,675	I148F	probably benign	Het
Mei1	A	G	15: 82,103,312	N859S	probably benign	Het
Mib1	A	G	18: 10,812,064	D987G	probably damaging	Het
Mroh8	A	G	2: 157,271,975	V132A	possibly damaging	Het
Npnt	T	C	3: 132,948,132	I29M	probably benign	Het
Nrap	T	C	19: 56,384,105	D138G	probably damaging	Het
Olfr5	T	C	7: 6,480,932	M75V	probably benign	Het
Olfr512	A	G	7: 108,713,695	Y102C	probably damaging	Het
Olfr91	T	A	17: 37,093,808	E22V	probably damaging	Het
Osbpl5	A	C	7: 143,741,671		probably null	Het
Pcna-ps2	T	C	19: 9,283,683	V102A	possibly damaging	Het
Pik3c2g	T	C	6: 139,622,548	S221P	probably damaging	Het
Plppr3	A	G	10: 79,866,425	I271T	probably damaging	Het
Prkar1b	C	T	5: 139,127,643	A41T	probably benign	Het
Prkcsh	A	G	9: 22,012,868	D458G	probably damaging	Het
Prr14	G	T	7: 127,475,490	R398L	possibly damaging	Het
Ptafr	A	G	4: 132,579,985	R229G	probably damaging	Het
Rbp3	T	C	14: 33,954,545	F150S	probably damaging	Het
Rel	C	T	11: 23,742,761	G424D	probably benign	Het
Rlf	T	C	4: 121,150,112	Y557C	probably damaging	Het
Samt3	A	C	X: 86,047,134	M211L	probably benign	Het
Selenop	A	T	15: 3,275,694	I111F	probably damaging	Het
Slc2a2	G	A	3: 28,717,441	M173I	probably benign	Het
Slc43a1	G	T	2: 84,856,889	G361V	possibly damaging	Het
Slit2	G	A	5: 48,249,836	V870M	probably damaging	Het
Ssxb10	A	G	X: 8,331,019	D77G	probably benign	Het
Stk32b	T	A	5: 37,649,114	I29F	probably damaging	Het
Stra6l	T	A	4: 45,867,237	C161*	probably null	Het
Tecpr2	T	A	12: 110,954,785	M1264K	probably benign	Het
Tfap2c	A	T	2: 172,557,236	I468F	probably damaging	Het
Ticam1	C	T	17: 56,271,555	R180H	probably damaging	Het
Tlr4	T	A	4: 66,841,035	N688K	probably benign	Het
Tmem35b	A	T	4: 127,126,053		probably benign	Het
Ugt2b34	T	C	5: 86,906,313	E203G	probably damaging	Het
Vegfa	A	C	17: 46,018,860	*393G	probably null	Het
Vmn2r16	T	C	5: 109,364,024	V699A	probably benign	Het
Zfp324	T	C	7: 12,971,218	S445P	probably damaging	Het
Zfp982	T	A	4: 147,512,592	C135*	probably null	Het
Zfp990	A	C	4: 145,536,869	N146H	probably damaging	Het
Zfyve26	A	G	12: 79,255,243	Y431H	possibly damaging	Het

Other mutations in Olfr1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01380:Olfr1	APN	11	73395191	missense	probably damaging	0.98
IGL01938:Olfr1	APN	11	73395645	missense	probably damaging	1.00
IGL02270:Olfr1	APN	11	73395365	missense	probably benign
IGL03287:Olfr1	APN	11	73396019	start codon destroyed	probably null	1.00
R0006:Olfr1	UTSW	11	73395488	missense	probably damaging	0.99
R0907:Olfr1	UTSW	11	73395119	missense	probably damaging	0.97
R3804:Olfr1	UTSW	11	73395950	missense	probably benign	0.01
R4064:Olfr1	UTSW	11	73395522	missense	probably benign	0.04
R4171:Olfr1	UTSW	11	73395539	missense	probably damaging	1.00
R4724:Olfr1	UTSW	11	73395155	missense	probably damaging	1.00
R4732:Olfr1	UTSW	11	73395695	missense	probably benign	0.03
R4733:Olfr1	UTSW	11	73395695	missense	probably benign	0.03
R5030:Olfr1	UTSW	11	73395654	frame shift	probably null
R5097:Olfr1	UTSW	11	73395293	missense	probably damaging	1.00
R5098:Olfr1	UTSW	11	73395654	frame shift	probably null
R5101:Olfr1	UTSW	11	73395654	frame shift	probably null
R5135:Olfr1	UTSW	11	73395654	frame shift	probably null
R5137:Olfr1	UTSW	11	73395654	frame shift	probably null
R5192:Olfr1	UTSW	11	73395654	frame shift	probably null
R5193:Olfr1	UTSW	11	73395653	frame shift	probably null
R5193:Olfr1	UTSW	11	73395654	frame shift	probably null
R5197:Olfr1	UTSW	11	73395654	frame shift	probably null
R5220:Olfr1	UTSW	11	73395654	frame shift	probably null
R5221:Olfr1	UTSW	11	73395654	frame shift	probably null
R5222:Olfr1	UTSW	11	73395654	frame shift	probably null
R5258:Olfr1	UTSW	11	73395654	frame shift	probably null
R5297:Olfr1	UTSW	11	73395654	frame shift	probably null
R5396:Olfr1	UTSW	11	73395654	frame shift	probably null
R5398:Olfr1	UTSW	11	73395654	frame shift	probably null
R5399:Olfr1	UTSW	11	73395654	frame shift	probably null
R5432:Olfr1	UTSW	11	73395654	frame shift	probably null
R5433:Olfr1	UTSW	11	73395654	frame shift	probably null
R5531:Olfr1	UTSW	11	73395177	missense	probably benign	0.26
R5634:Olfr1	UTSW	11	73395654	frame shift	probably null
R5714:Olfr1	UTSW	11	73395361	splice site	probably null
R5812:Olfr1	UTSW	11	73395654	frame shift	probably null
R5813:Olfr1	UTSW	11	73395654	frame shift	probably null
R5814:Olfr1	UTSW	11	73395654	frame shift	probably null
R5815:Olfr1	UTSW	11	73395654	frame shift	probably null
R5913:Olfr1	UTSW	11	73395654	frame shift	probably null
R5955:Olfr1	UTSW	11	73395654	frame shift	probably null
R5956:Olfr1	UTSW	11	73395654	frame shift	probably null
R5968:Olfr1	UTSW	11	73395192	missense	possibly damaging	0.75
R6029:Olfr1	UTSW	11	73395654	frame shift	probably null
R6034:Olfr1	UTSW	11	73395654	frame shift	probably null
R6034:Olfr1	UTSW	11	73395654	frame shift	probably null
R6176:Olfr1	UTSW	11	73395654	frame shift	probably null
R6177:Olfr1	UTSW	11	73395654	frame shift	probably null
R6178:Olfr1	UTSW	11	73395654	frame shift	probably null
R6196:Olfr1	UTSW	11	73395473	missense	probably benign	0.08
R6995:Olfr1	UTSW	11	73395584	missense	probably benign
R7035:Olfr1	UTSW	11	73395718	missense	probably benign	0.00
R7470:Olfr1	UTSW	11	73395888	missense	probably damaging	1.00
R7530:Olfr1	UTSW	11	73388363	missense	possibly damaging	0.55
R8461:Olfr1	UTSW	11	73395156	missense	probably damaging	1.00
R9149:Olfr1	UTSW	11	73396027	unclassified	probably benign
R9279:Olfr1	UTSW	11	73388963	missense	probably benign	0.05
R9293:Olfr1	UTSW	11	73395129	missense	probably damaging	0.99
R9682:Olfr1	UTSW	11	73395199	missense	probably benign	0.03
R9752:Olfr1	UTSW	11	73395653	missense	possibly damaging	0.88

Predicted Primers

PCR Primer
(F):5'- GAGAAAGGTGACTCAGGTCC -3'
(R):5'- GTGGATCTCACCTGTCTGTAG -3'

Sequencing Primer
(F):5'- GGTGACTCAGGTCCCTCAAAC -3'
(R):5'- GGATCTCACCTGTCTGTAGTGTCAC -3'

Posted On

2014-08-25