Mutagenetix > Incidental Mutation

Incidental Mutation 'R1985:Krt9'

220517

Institutional Source

Beutler Lab

Gene Symbol

Krt9

Ensembl Gene

ENSMUSG00000051617

Gene Name

keratin 9

Synonyms

K9, Krt1-9

MMRRC Submission

039997-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R1985 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

100077607-100084072 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 100080817 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Methionine to Lysine at position 345 (M345K)

Ref Sequence

ENSEMBL: ENSMUSP00000055255 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000059707]

AlphaFold

Q6RHW0

Predicted Effect

probably benign
Transcript: ENSMUST00000059707
AA Change: M345K

PolyPhen 2 Score 0.017 (Sensitivity: 0.95; Specificity: 0.80)

SMART Domains

Protein: ENSMUSP00000055255
Gene: ENSMUSG00000051617
AA Change: M345K

Domain	Start	End	E-Value	Type
low complexity region	6	125	N/A	INTRINSIC
Filament	130	442	2.96e-124	SMART
low complexity region	462	716	N/A	INTRINSIC
low complexity region	721	737	N/A	INTRINSIC

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.1%
3x: 98.5%
10x: 96.8%
20x: 94.2%

Validation Efficiency

94% (76/81)

MGI Phenotype

PHENOTYPE: Mice homozygous for a knock-out allele exhibit hyperpigmented calluses on the footpad with acanthosis, hyperkeratosis, thick epidermis and increased keratinocyte proliferation. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 80 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abhd8	C	A	8: 71,916,157 (GRCm39)		probably benign	Het
Adam5	A	T	8: 25,236,755 (GRCm39)	D648E	probably benign	Het
Akr1d1	A	G	6: 37,535,336 (GRCm39)	D240G	probably damaging	Het
Ankmy2	A	G	12: 36,207,363 (GRCm39)	H3R	possibly damaging	Het
Anpep	A	C	7: 79,490,605 (GRCm39)		probably null	Het
Apobr	A	G	7: 126,186,903 (GRCm39)	T20A	possibly damaging	Het
Atp2a2	A	T	5: 122,604,899 (GRCm39)	Y427N	probably benign	Het
Camkk2	A	C	5: 122,902,190 (GRCm39)	S40A	possibly damaging	Het
Camp	T	C	9: 109,677,497 (GRCm39)	N112S	probably benign	Het
Cbx7	A	G	15: 79,802,591 (GRCm39)	S229P	probably damaging	Het
Cnot2	T	C	10: 116,363,781 (GRCm39)	N41S	probably damaging	Het
Dchs1	A	G	7: 105,421,605 (GRCm39)	F272L	possibly damaging	Het
Dct	T	C	14: 118,273,954 (GRCm39)	K318E	probably benign	Het
Dhrs11	A	C	11: 84,719,633 (GRCm39)	L31V	probably damaging	Het
Dnah7a	T	C	1: 53,543,093 (GRCm39)	D2359G	probably benign	Het
Dnajc7	A	G	11: 100,481,718 (GRCm39)	S305P	probably benign	Het
Dscc1	CTGAATGAAT	CTGAAT	15: 54,943,572 (GRCm39)		probably benign	Het
Flnc	A	G	6: 29,444,415 (GRCm39)		probably benign	Het
Garin3	T	C	11: 46,298,693 (GRCm39)	*666Q	probably null	Het
Gm7535	A	G	17: 18,131,800 (GRCm39)		probably benign	Het
Grtp1	A	G	8: 13,229,376 (GRCm39)	F313L	probably damaging	Het
Haus6	T	C	4: 86,511,846 (GRCm39)	Y425C	possibly damaging	Het
Hdac1	T	A	4: 129,422,753 (GRCm39)	N83Y	possibly damaging	Het
Hdlbp	A	G	1: 93,358,840 (GRCm39)	I237T	probably damaging	Het
Hfm1	A	T	5: 107,046,442 (GRCm39)	D481E	probably damaging	Het
Hipk3	T	C	2: 104,264,780 (GRCm39)	I737V	probably benign	Het
Il23r	T	A	6: 67,467,652 (GRCm39)		probably null	Het
Il24	G	A	1: 130,810,268 (GRCm39)	T196I	probably benign	Het
Ints3	C	T	3: 90,307,610 (GRCm39)		probably null	Het
Kcna6	T	C	6: 126,715,473 (GRCm39)	E472G	probably benign	Het
Kcnj16	C	T	11: 110,916,409 (GRCm39)	T357M	probably benign	Het
Kdm4b	T	A	17: 56,708,302 (GRCm39)	V957E	probably damaging	Het
Kif21b	G	A	1: 136,075,284 (GRCm39)	D166N	probably damaging	Het
Klhl11	G	T	11: 100,354,070 (GRCm39)	Q584K	probably benign	Het
Lgr5	T	C	10: 115,331,150 (GRCm39)		probably benign	Het
Lilrb4b	A	T	10: 51,357,831 (GRCm39)	Q80L	possibly damaging	Het
Lrrc69	T	C	4: 14,708,669 (GRCm39)	E225G	possibly damaging	Het
Ly9	A	G	1: 171,427,341 (GRCm39)	S405P	probably damaging	Het
Myh2	A	G	11: 67,071,740 (GRCm39)	D519G	possibly damaging	Het
Nav3	G	A	10: 109,606,045 (GRCm39)		probably benign	Het
Nfkb1	G	A	3: 135,321,110 (GRCm39)	T215I	possibly damaging	Het
Ninj2	A	T	6: 120,175,600 (GRCm39)		probably benign	Het
Obsl1	A	G	1: 75,482,244 (GRCm39)	C209R	probably damaging	Het
Or13a25	G	A	7: 140,247,734 (GRCm39)	C171Y	probably damaging	Het
Or2d4	A	G	7: 106,544,133 (GRCm39)	I25T	probably benign	Het
Or2j6	A	T	7: 139,980,713 (GRCm39)	M82K	possibly damaging	Het
Or2t44	A	C	11: 58,677,210 (GRCm39)	D50A	probably damaging	Het
Or2y1g	T	C	11: 49,171,110 (GRCm39)	I45T	probably damaging	Het
Or52z14	A	T	7: 103,252,879 (GRCm39)	Y6F	probably benign	Het
Otud4	G	C	8: 80,366,641 (GRCm39)	R36P	probably damaging	Het
Pcnt	C	T	10: 76,216,171 (GRCm39)	R2239H	possibly damaging	Het
Pgbd5	T	A	8: 125,097,331 (GRCm39)	M491L	probably benign	Het
Pitrm1	A	T	13: 6,608,220 (GRCm39)	D316V	probably damaging	Het
Plod3	A	G	5: 137,019,707 (GRCm39)		probably null	Het
Plppr3	A	T	10: 79,703,294 (GRCm39)	Y63*	probably null	Het
Pramel52-ps	A	T	5: 94,531,931 (GRCm39)	I272L	probably benign	Het
Prickle2	T	C	6: 92,388,433 (GRCm39)	D323G	probably damaging	Het
Psmd11	A	T	11: 80,336,089 (GRCm39)	I114F	probably damaging	Het
Ptch1	T	G	13: 63,672,773 (GRCm39)	E944A	probably benign	Het
Rbp3	C	T	14: 33,677,975 (GRCm39)	T641M	probably damaging	Het
Rbp3	T	G	14: 33,678,418 (GRCm39)	S789A	probably benign	Het
Rfxap	C	A	3: 54,714,747 (GRCm39)	R117L	probably damaging	Het
Rims2	T	A	15: 39,208,710 (GRCm39)	M171K	probably damaging	Het
Scin	A	G	12: 40,183,907 (GRCm39)		probably null	Het
Scn11a	A	G	9: 119,583,744 (GRCm39)	S1624P	probably benign	Het
Slc41a3	G	A	6: 90,619,210 (GRCm39)	V330M	probably damaging	Het
Slc9c1	A	G	16: 45,370,469 (GRCm39)	I237V	probably benign	Het
Spag6	A	G	2: 18,736,930 (GRCm39)	I218V	probably benign	Het
Stam2	T	C	2: 52,599,638 (GRCm39)	T257A	possibly damaging	Het
Tbc1d24	G	A	17: 24,426,938 (GRCm39)	R318*	probably null	Het
Tedc2	T	A	17: 24,435,291 (GRCm39)	E366V	probably damaging	Het
Tedc2	C	A	17: 24,435,292 (GRCm39)	E366*	probably null	Het
Trpm3	T	A	19: 22,903,446 (GRCm39)	Y1069N	possibly damaging	Het
Tuba8	A	G	6: 121,197,479 (GRCm39)	D47G	probably benign	Het
Tulp3	A	T	6: 128,303,769 (GRCm39)	S277T	probably benign	Het
Uqcc6	T	A	10: 82,456,051 (GRCm39)	T37S	possibly damaging	Het
Wdr7	GTT	GT	18: 63,893,654 (GRCm39)		probably null	Het
Ybx2	A	G	11: 69,827,294 (GRCm39)		probably null	Het
Zfp407	C	T	18: 84,577,898 (GRCm39)	A1072T	probably benign	Het
Zfp788	T	A	7: 41,299,905 (GRCm39)	I795N	probably damaging	Het

Other mutations in Krt9

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00725:Krt9	APN	11	100,080,832 (GRCm39)	missense	probably damaging	1.00
IGL01695:Krt9	APN	11	100,082,263 (GRCm39)	critical splice donor site	probably null
IGL02383:Krt9	APN	11	100,082,041 (GRCm39)	missense	probably damaging	1.00
IGL02529:Krt9	APN	11	100,080,792 (GRCm39)	missense	probably damaging	0.99
IGL02819:Krt9	APN	11	100,082,346 (GRCm39)	missense	probably damaging	1.00
droplet	UTSW	11	100,081,614 (GRCm39)	missense	probably damaging	1.00
R5944_Krt9_487	UTSW	11	100,079,265 (GRCm39)	missense	unknown
G1citation:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R1356:Krt9	UTSW	11	100,079,640 (GRCm39)	small insertion	probably benign
R1397:Krt9	UTSW	11	100,083,464 (GRCm39)	missense	probably damaging	1.00
R1498:Krt9	UTSW	11	100,079,195 (GRCm39)	nonsense	probably null
R1772:Krt9	UTSW	11	100,082,131 (GRCm39)	missense	probably damaging	0.99
R1871:Krt9	UTSW	11	100,081,614 (GRCm39)	missense	probably damaging	1.00
R1883:Krt9	UTSW	11	100,079,523 (GRCm39)	missense	unknown
R2056:Krt9	UTSW	11	100,082,321 (GRCm39)	missense	probably damaging	1.00
R2253:Krt9	UTSW	11	100,081,685 (GRCm39)	missense	possibly damaging	0.83
R2305:Krt9	UTSW	11	100,083,942 (GRCm39)	missense	unknown
R2875:Krt9	UTSW	11	100,080,031 (GRCm39)	nonsense	probably null
R3813:Krt9	UTSW	11	100,080,503 (GRCm39)	missense	probably damaging	1.00
R3874:Krt9	UTSW	11	100,081,675 (GRCm39)	missense	probably damaging	1.00
R4157:Krt9	UTSW	11	100,079,475 (GRCm39)	missense	unknown
R4762:Krt9	UTSW	11	100,081,675 (GRCm39)	missense	probably damaging	1.00
R4873:Krt9	UTSW	11	100,080,863 (GRCm39)	missense	probably benign	0.06
R4875:Krt9	UTSW	11	100,080,863 (GRCm39)	missense	probably benign	0.06
R4923:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R4973:Krt9	UTSW	11	100,079,538 (GRCm39)	missense	unknown
R5153:Krt9	UTSW	11	100,082,068 (GRCm39)	missense	probably damaging	0.99
R5658:Krt9	UTSW	11	100,081,593 (GRCm39)	missense	probably damaging	0.98
R5696:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R5944:Krt9	UTSW	11	100,079,265 (GRCm39)	missense	unknown
R6147:Krt9	UTSW	11	100,079,665 (GRCm39)	missense	unknown
R6403:Krt9	UTSW	11	100,080,485 (GRCm39)	missense	probably damaging	0.99
R6476:Krt9	UTSW	11	100,081,640 (GRCm39)	missense	probably damaging	1.00
R6822:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R7159:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R7174:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R7203:Krt9	UTSW	11	100,081,617 (GRCm39)	missense	probably damaging	1.00
R7805:Krt9	UTSW	11	100,083,522 (GRCm39)	missense	possibly damaging	0.85
R7817:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R7822:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R7834:Krt9	UTSW	11	100,083,492 (GRCm39)	missense	probably benign	0.06
R7947:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R7977:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R8943:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R9092:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R9099:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R9203:Krt9	UTSW	11	100,079,734 (GRCm39)	missense	unknown
R9313:Krt9	UTSW	11	100,079,547 (GRCm39)	missense	unknown
R9361:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R9370:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R9438:Krt9	UTSW	11	100,079,824 (GRCm39)	missense	unknown
R9448:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R9455:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R9620:Krt9	UTSW	11	100,079,186 (GRCm39)	missense	unknown
R9676:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign
R9719:Krt9	UTSW	11	100,079,903 (GRCm39)	small deletion	probably benign

Predicted Primers

PCR Primer
(F):5'- GGGCTGATTTCTAGGAAGCG -3'
(R):5'- AACTGGTCAACCTGGTCAGTG -3'

Sequencing Primer
(F):5'- GCTGATTTCTAGGAAGCGAAAGG -3'
(R):5'- GGGACCCAGAATTCAGTAGTATATCC -3'

Posted On

2014-08-25