Mutagenetix > Incidental Mutation

Incidental Mutation 'R2002:Or3a10'

223224

Institutional Source

Beutler Lab

Gene Symbol

Or3a10

Ensembl Gene

ENSMUSG00000047444

Gene Name

olfactory receptor family 3 subfamily A member 10

Synonyms

GA_x6K02T2P1NL-4202012-4201065, M5, Olfr139, MOR255-2

MMRRC Submission

040012-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.130) question?

Stock #

R2002 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

73935151-73936098 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 73935865 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Serine to Arginine at position 78 (S78R)

Ref Sequence

ENSEMBL: ENSMUSP00000148999 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000050678] [ENSMUST00000206280] [ENSMUST00000214111]

AlphaFold

Q60891

Predicted Effect

possibly damaging
Transcript: ENSMUST00000050678
AA Change: S78R

PolyPhen 2 Score 0.490 (Sensitivity: 0.88; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000049558
Gene: ENSMUSG00000047444
AA Change: S78R

Domain	Start	End	E-Value	Type
Pfam:7tm_4	34	311	1.4e-56	PFAM
Pfam:7TM_GPCR_Srsx	38	276	5.3e-6	PFAM
Pfam:7tm_1	44	293	8.1e-25	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000206280
AA Change: S78R

PolyPhen 2 Score 0.490 (Sensitivity: 0.88; Specificity: 0.90)

Predicted Effect

possibly damaging
Transcript: ENSMUST00000214111
AA Change: S78R

PolyPhen 2 Score 0.490 (Sensitivity: 0.88; Specificity: 0.90)

Meta Mutation Damage Score

0.1795

Coding Region Coverage

1x: 99.1%
3x: 98.3%
10x: 96.2%
20x: 91.6%

Validation Efficiency

97% (72/74)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 75 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930548G14Rik	T	C	15: 46,489,002 (GRCm39)		noncoding transcript	Het
Abcb4	T	A	5: 8,955,989 (GRCm39)	S98T	probably benign	Het
Acan	T	C	7: 78,750,541 (GRCm39)	S1771P	probably damaging	Het
Acvr1c	T	A	2: 58,205,987 (GRCm39)	Q41L	probably benign	Het
Ak2	T	A	4: 128,902,022 (GRCm39)	S232T	probably benign	Het
Akr1e1	T	A	13: 4,657,564 (GRCm39)		probably benign	Het
Ano7	T	C	1: 93,328,303 (GRCm39)		probably benign	Het
Aox1	T	A	1: 58,086,300 (GRCm39)	H68Q	possibly damaging	Het
Apaf1	A	G	10: 90,897,676 (GRCm39)	V269A	possibly damaging	Het
Apba2	A	T	7: 64,383,290 (GRCm39)	I368F	probably damaging	Het
Armc3	A	G	2: 19,293,747 (GRCm39)	M513V	probably benign	Het
Asb5	G	A	8: 55,036,655 (GRCm39)	V116M	probably damaging	Het
Atg16l2	A	G	7: 100,944,127 (GRCm39)	S280P	possibly damaging	Het
Atp6v0c	G	T	17: 24,383,835 (GRCm39)	T40K	probably damaging	Het
Cdk2ap2	A	G	19: 4,147,903 (GRCm39)	M57V	possibly damaging	Het
Cip2a	T	C	16: 48,826,214 (GRCm39)		probably benign	Het
Ctnnd1	T	C	2: 84,450,704 (GRCm39)	N172S	probably benign	Het
Ddx55	T	A	5: 124,704,503 (GRCm39)	V370E	probably damaging	Het
Ddx6	A	G	9: 44,518,831 (GRCm39)	T48A	probably benign	Het
Dnah10	C	T	5: 124,911,052 (GRCm39)	R4490W	probably damaging	Het
Dspp	T	A	5: 104,326,425 (GRCm39)	S929R	unknown	Het
Erbb3	T	C	10: 128,422,094 (GRCm39)	Y50C	probably benign	Het
Fam209	C	A	2: 172,314,689 (GRCm39)	N59K	probably benign	Het
Fgd3	T	C	13: 49,449,931 (GRCm39)	E106G	probably benign	Het
Frmd4a	A	C	2: 4,577,176 (GRCm39)	K344T	probably damaging	Het
Gbe1	A	G	16: 70,325,814 (GRCm39)	E617G	probably damaging	Het
Gm5089	T	A	14: 122,673,686 (GRCm39)	I12F	unknown	Het
Gm7052	T	A	17: 22,258,920 (GRCm39)		probably benign	Het
Gria1	A	T	11: 56,902,930 (GRCm39)	N24I	possibly damaging	Het
Grin2b	T	C	6: 135,710,243 (GRCm39)	E1101G	probably damaging	Het
Hjurp	GT	GTT	1: 88,194,246 (GRCm39)		probably null	Het
Kcnma1	A	C	14: 23,387,097 (GRCm39)	S982A	probably damaging	Het
Khdrbs3	T	A	15: 68,885,328 (GRCm39)		probably benign	Het
Kif23	A	T	9: 61,834,666 (GRCm39)	C426*	probably null	Het
Lmo7	G	T	14: 102,124,497 (GRCm39)	A319S	probably benign	Het
Ly6c1	T	A	15: 74,920,342 (GRCm39)	T7S	possibly damaging	Het
Magel2	G	A	7: 62,028,844 (GRCm39)	V583I	unknown	Het
Mamdc4	A	T	2: 25,457,244 (GRCm39)	W548R	probably damaging	Het
Mfsd2a	C	T	4: 122,850,609 (GRCm39)	R88Q	probably damaging	Het
Mkrn1	T	C	6: 39,382,737 (GRCm39)	T158A	probably benign	Het
Mroh2b	G	T	15: 4,955,166 (GRCm39)	D720Y	probably damaging	Het
Mycbp2	A	G	14: 103,485,839 (GRCm39)	V1041A	probably damaging	Het
Ncam2	A	T	16: 81,386,586 (GRCm39)	H655L	possibly damaging	Het
Npas2	T	C	1: 39,377,276 (GRCm39)	V546A	probably benign	Het
Nrxn3	G	A	12: 90,299,089 (GRCm39)	A400T	probably damaging	Het
Oog3	G	T	4: 143,884,675 (GRCm39)	H420Q	possibly damaging	Het
Or5ap2	T	A	2: 85,680,744 (GRCm39)	V316E	probably benign	Het
Or8k28	T	C	2: 86,285,817 (GRCm39)	H266R	probably benign	Het
Pak5	T	A	2: 135,958,557 (GRCm39)	H177L	probably benign	Het
Pcca	A	G	14: 123,124,477 (GRCm39)	I683V	probably benign	Het
Pea15a	T	C	1: 172,026,252 (GRCm39)	I90V	probably benign	Het
Plagl1	C	A	10: 13,004,402 (GRCm39)		probably benign	Het
Prmt1	A	G	7: 44,628,148 (GRCm39)	V237A	probably damaging	Het
Ptprz1	T	A	6: 23,027,833 (GRCm39)	Y910*	probably null	Het
Rasal3	T	A	17: 32,612,585 (GRCm39)	T757S	probably damaging	Het
Rbbp8	T	C	18: 11,860,223 (GRCm39)		probably benign	Het
S1pr1	A	G	3: 115,506,544 (GRCm39)	S17P	probably benign	Het
Scel	G	A	14: 103,779,421 (GRCm39)	V131M	probably damaging	Het
Scn2a	G	A	2: 65,512,427 (GRCm39)	R188Q	probably null	Het
Snap29	T	A	16: 17,224,190 (GRCm39)	Y68*	probably null	Het
Spdl1	T	C	11: 34,713,473 (GRCm39)	T199A	probably benign	Het
Srbd1	T	C	17: 86,449,828 (GRCm39)	N14D	probably benign	Het
Ston1	G	A	17: 88,942,957 (GRCm39)	G121D	probably benign	Het
Syt16	G	A	12: 74,281,977 (GRCm39)	G367E	possibly damaging	Het
Tdpoz1	T	C	3: 93,578,710 (GRCm39)	T25A	possibly damaging	Het
Tmem182	T	A	1: 40,845,355 (GRCm39)	Y77N	probably damaging	Het
Tmprss11f	A	T	5: 86,687,627 (GRCm39)		probably benign	Het
Trp73	T	C	4: 154,165,902 (GRCm39)	T56A	probably damaging	Het
Trpm3	A	G	19: 22,959,947 (GRCm39)	K1194R	probably damaging	Het
Ttc39c	T	A	18: 12,830,935 (GRCm39)		probably null	Het
Ube4b	T	C	4: 149,468,254 (GRCm39)	D174G	probably benign	Het
Vmn1r211	A	T	13: 23,035,953 (GRCm39)	M238K	probably damaging	Het
Wsb2	T	A	5: 117,508,798 (GRCm39)	N77K	probably benign	Het
Xkr4	C	T	1: 3,741,318 (GRCm39)	R85Q	probably benign	Het
Zmynd11	T	A	13: 9,739,514 (GRCm39)		probably null	Het

Other mutations in Or3a10

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
R0276:Or3a10	UTSW	11	73,935,944 (GRCm39)	missense	probably damaging	1.00
R0545:Or3a10	UTSW	11	73,935,873 (GRCm39)	missense	possibly damaging	0.90
R1560:Or3a10	UTSW	11	73,935,441 (GRCm39)	missense	probably damaging	1.00
R1570:Or3a10	UTSW	11	73,935,633 (GRCm39)	missense	possibly damaging	0.65
R1781:Or3a10	UTSW	11	73,935,786 (GRCm39)	missense	probably damaging	1.00
R2857:Or3a10	UTSW	11	73,935,653 (GRCm39)	missense	possibly damaging	0.93
R2858:Or3a10	UTSW	11	73,935,653 (GRCm39)	missense	possibly damaging	0.93
R2859:Or3a10	UTSW	11	73,935,653 (GRCm39)	missense	possibly damaging	0.93
R3874:Or3a10	UTSW	11	73,935,525 (GRCm39)	missense	probably damaging	1.00
R5023:Or3a10	UTSW	11	73,935,881 (GRCm39)	missense	probably damaging	1.00
R5057:Or3a10	UTSW	11	73,935,881 (GRCm39)	missense	probably damaging	1.00
R5242:Or3a10	UTSW	11	73,935,848 (GRCm39)	missense	possibly damaging	0.89
R5495:Or3a10	UTSW	11	73,935,611 (GRCm39)	missense	probably damaging	1.00
R5655:Or3a10	UTSW	11	73,935,160 (GRCm39)	nonsense	probably null
R7220:Or3a10	UTSW	11	73,935,589 (GRCm39)	missense	possibly damaging	0.63
R7343:Or3a10	UTSW	11	73,935,726 (GRCm39)	missense	possibly damaging	0.68
R7793:Or3a10	UTSW	11	73,935,614 (GRCm39)	missense	possibly damaging	0.89
R8169:Or3a10	UTSW	11	73,935,707 (GRCm39)	missense	possibly damaging	0.95
R8262:Or3a10	UTSW	11	73,935,926 (GRCm39)	missense	probably damaging	1.00
R8340:Or3a10	UTSW	11	73,935,851 (GRCm39)	missense	probably damaging	0.96
R8948:Or3a10	UTSW	11	73,935,782 (GRCm39)	missense	possibly damaging	0.50
R8950:Or3a10	UTSW	11	73,935,782 (GRCm39)	missense	possibly damaging	0.50
R9046:Or3a10	UTSW	11	73,935,284 (GRCm39)	missense	probably damaging	1.00
R9202:Or3a10	UTSW	11	73,935,441 (GRCm39)	missense	probably damaging	1.00
R9575:Or3a10	UTSW	11	73,935,840 (GRCm39)	missense	probably benign	0.01
R9587:Or3a10	UTSW	11	73,935,360 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GCAAATACCCACCAGTGTGC -3'
(R):5'- TGGCTTAACAGGAAATGTAAGACTG -3'

Sequencing Primer
(F):5'- ACTTCACGGCTCATGCG -3'
(R):5'- GGAAATGTAAGACTGCAACCTATC -3'

Posted On

2014-08-25