Mutagenetix > Incidental Mutations

Incidental Mutation 'R2034:Nfe2l3'

224317

Institutional Source

Beutler Lab

Gene Symbol

Nfe2l3

Ensembl Gene

ENSMUSG00000029832

Gene Name

nuclear factor, erythroid derived 2, like 3

Synonyms

Nrf3

MMRRC Submission

040041-MU

Accession Numbers

Is this an essential gene?

Non essential (E-score: 0.000) question?

Stock #

R2034 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

51432670-51458768 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 51458370 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Valine at position 637 (I637V)

Ref Sequence

ENSEMBL: ENSMUSP00000005103 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000005103] [ENSMUST00000069949] [ENSMUST00000090002] [ENSMUST00000114459] [ENSMUST00000160133] [ENSMUST00000203220] [ENSMUST00000203954] [ENSMUST00000204158] [ENSMUST00000204188]

AlphaFold

Q9WTM4

Predicted Effect

possibly damaging
Transcript: ENSMUST00000005103
AA Change: I637V

PolyPhen 2 Score 0.501 (Sensitivity: 0.88; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000005103
Gene: ENSMUSG00000029832
AA Change: I637V

Domain	Start	End	E-Value	Type
transmembrane domain	7	29	N/A	INTRINSIC
low complexity region	117	134	N/A	INTRINSIC
low complexity region	145	155	N/A	INTRINSIC
low complexity region	390	405	N/A	INTRINSIC
BRLZ	539	603	3.68e-13	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000069949

SMART Domains

Protein: ENSMUSP00000067491
Gene: ENSMUSG00000004980

Domain	Start	End	E-Value	Type
RRM	10	82	1.51e-23	SMART
RRM	101	173	7.64e-20	SMART
Pfam:HnRNPA1	245	282	5.1e-19	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000090002

SMART Domains

Protein: ENSMUSP00000087453
Gene: ENSMUSG00000004980

Domain	Start	End	E-Value	Type
RRM	10	82	1.51e-23	SMART
RRM	101	173	7.64e-20	SMART
low complexity region	186	295	N/A	INTRINSIC
low complexity region	310	341	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000114459

SMART Domains

Protein: ENSMUSP00000110103
Gene: ENSMUSG00000004980

Domain	Start	End	E-Value	Type
RRM	10	82	1.51e-23	SMART
RRM	101	173	7.64e-20	SMART
low complexity region	186	295	N/A	INTRINSIC
low complexity region	310	341	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000160133

SMART Domains

Protein: ENSMUSP00000124920
Gene: ENSMUSG00000029832

Domain	Start	End	E-Value	Type
transmembrane domain	7	29	N/A	INTRINSIC
low complexity region	117	134	N/A	INTRINSIC
low complexity region	145	155	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000203220

SMART Domains

Protein: ENSMUSP00000145374
Gene: ENSMUSG00000004980

Domain	Start	End	E-Value	Type
RRM	10	82	1.51e-23	SMART
RRM	101	173	7.64e-20	SMART
low complexity region	186	295	N/A	INTRINSIC
low complexity region	310	341	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000203954

SMART Domains

Protein: ENSMUSP00000145028
Gene: ENSMUSG00000004980

Domain	Start	End	E-Value	Type
RRM	22	94	1.51e-23	SMART
RRM	113	185	7.64e-20	SMART
low complexity region	198	307	N/A	INTRINSIC
low complexity region	322	353	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000204090

Predicted Effect

probably benign
Transcript: ENSMUST00000204158

SMART Domains

Protein: ENSMUSP00000145383
Gene: ENSMUSG00000004980

Domain	Start	End	E-Value	Type
RRM	10	82	1.51e-23	SMART
RRM	101	173	7.64e-20	SMART
Pfam:HnRNPA1	245	282	9.5e-19	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000204188

SMART Domains

Protein: ENSMUSP00000145245
Gene: ENSMUSG00000004980

Domain	Start	End	E-Value	Type
RRM	10	82	1.51e-23	SMART
RRM	101	173	7.64e-20	SMART
Pfam:HnRNPA1	245	282	9.5e-19	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000204885

Meta Mutation Damage Score

0.0719

Coding Region Coverage

1x: 99.3%
3x: 98.7%
10x: 97.3%
20x: 95.2%

Validation Efficiency

100% (71/71)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the cap 'n' collar basic-region leucine zipper family of transcription factors. The encoded protein heterodimerizes with small musculoaponeurotic fibrosarcoma factors to bind antioxidant response elements in target genes. This protein is a membrane bound glycoprotein that is targeted to the endoplasmic reticulum and the nuclear envelope. Pseudogenes of this gene are found on chromosomes 16, 17, and 18. [provided by RefSeq, Mar 2009]
PHENOTYPE: Mice homozygous for disruptions in this gene display a normal phenotype. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 70 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2810408A11Rik	T	C	11: 69,900,559	I65V	probably benign	Het
Abca13	A	G	11: 9,292,628	N1497S	possibly damaging	Het
Afmid	C	A	11: 117,835,235	N184K	probably benign	Het
Ampd2	A	T	3: 108,077,363	I459N	possibly damaging	Het
Anapc1	T	C	2: 128,648,458	D1018G	possibly damaging	Het
Ano9	T	A	7: 141,108,135	I223F	probably damaging	Het
B3gnt6	A	G	7: 98,194,018	L245P	possibly damaging	Het
Bag6	G	A	17: 35,144,692	R784Q	probably damaging	Het
Brca1	C	G	11: 101,489,849	S1786T	probably benign	Het
Btbd3	T	G	2: 138,278,983	S26A	probably benign	Het
Cacna1d	C	A	14: 30,089,863	V1277L	probably damaging	Het
Casp12	C	T	9: 5,346,491	T6I	probably damaging	Het
Col7a1	T	C	9: 108,963,007	V1262A	unknown	Het
Crh	C	A	3: 19,694,098	G127C	probably damaging	Het
D5Ertd579e	A	T	5: 36,613,538	L64*	probably null	Het
Dab1	C	T	4: 104,731,751	A524V	probably benign	Het
Ddc	T	A	11: 11,880,456	I63L	probably benign	Het
Eif3a	C	T	19: 60,762,130		probably benign	Het
Fsip2	T	A	2: 82,989,494	N5190K	probably benign	Het
Gm5420	A	G	10: 21,691,613		noncoding transcript	Het
Grb14	A	G	2: 64,923,529		probably benign	Het
Gsap	A	T	5: 21,270,595	I545F	probably damaging	Het
Hectd1	A	T	12: 51,757,116		probably null	Het
Helz2	G	A	2: 181,232,578	P2041L	probably damaging	Het
Herc1	G	A	9: 66,441,972	A2038T	probably benign	Het
Il10	C	A	1: 131,024,185	Q152K	probably benign	Het
Klrg1	A	G	6: 122,279,637		probably null	Het
Lrig2	T	C	3: 104,494,092	T160A	probably benign	Het
Mmd2	A	T	5: 142,575,184		probably null	Het
Mmp2	C	T	8: 92,836,912	S338F	probably damaging	Het
Nalcn	T	G	14: 123,283,603	D1630A	probably benign	Het
Ncoa2	T	C	1: 13,164,983	S909G	probably benign	Het
Neb	A	T	2: 52,280,611	M1683K	possibly damaging	Het
Npw	G	A	17: 24,658,268	S53F	probably damaging	Het
Nrbf2	A	T	10: 67,275,564		probably benign	Het
Nrros	C	T	16: 32,144,157	W311*	probably null	Het
Nup188	T	A	2: 30,310,085		probably benign	Het
Olfr1444	T	A	19: 12,861,787	M4K	possibly damaging	Het
Olfr726	T	C	14: 50,083,983	M233V	probably benign	Het
Parp4	A	T	14: 56,634,263	I1133F	probably damaging	Het
Pcdhb11	T	C	18: 37,422,493	V292A	probably benign	Het
Pcnx2	A	G	8: 125,818,667		probably null	Het
Phf2	A	G	13: 48,817,730	S489P	unknown	Het
Pik3r5	T	A	11: 68,493,577	N598K	probably damaging	Het
Pikfyve	A	T	1: 65,222,357	E432D	probably damaging	Het
Pink1	T	C	4: 138,318,032	I274V	possibly damaging	Het
Pkhd1	G	A	1: 20,200,669	T3220I	probably damaging	Het
Plxna2	A	G	1: 194,780,594	I890V	probably benign	Het
Pomgnt1	T	C	4: 116,157,927	V492A	possibly damaging	Het
Prp2	G	T	6: 132,595,984		probably null	Het
Rabl6	T	C	2: 25,585,432	E543G	possibly damaging	Het
Rgp1	T	A	4: 43,581,605		probably null	Het
Rps6kb2	T	C	19: 4,161,107	T140A	probably damaging	Het
S100a11	T	C	3: 93,526,122	I91T	probably benign	Het
Serpine2	A	G	1: 79,796,852	L230P	probably damaging	Het
Sh3tc2	A	G	18: 61,987,666	D370G	probably damaging	Het
Sim2	A	C	16: 94,085,942	I43L	probably damaging	Het
Skp2	C	A	15: 9,113,698	G376C	probably damaging	Het
Slc14a2	A	G	18: 78,183,583	L419P	probably damaging	Het
Srgap1	C	T	10: 121,792,746	E817K	probably damaging	Het
Stag3	A	G	5: 138,298,001	E442G	possibly damaging	Het
Sulf1	A	G	1: 12,820,421	N361S	probably damaging	Het
Tmco6	A	G	18: 36,737,856		probably null	Het
Tmem104	T	A	11: 115,243,547	I303N	probably benign	Het
Ttll6	G	T	11: 96,135,526	D86Y	probably damaging	Het
Vmn1r120	T	G	7: 21,052,958	E276A	possibly damaging	Het
Vmn1r64	A	G	7: 5,883,989	M185T	probably benign	Het
Vmn2r85	A	T	10: 130,426,373		probably benign	Het
Vwa3a	A	T	7: 120,782,645	K568*	probably null	Het
Zcchc11	C	T	4: 108,512,195	R651W	probably damaging	Het

Other mutations in Nfe2l3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02705:Nfe2l3	APN	6	51433118	missense	probably damaging	0.96
IGL02803:Nfe2l3	APN	6	51457311	missense	possibly damaging	0.50
R0277:Nfe2l3	UTSW	6	51457468	missense	probably benign	0.30
R0693:Nfe2l3	UTSW	6	51433054	missense	possibly damaging	0.94
R1397:Nfe2l3	UTSW	6	51433294	missense	probably benign	0.00
R1455:Nfe2l3	UTSW	6	51457764	missense	possibly damaging	0.91
R1541:Nfe2l3	UTSW	6	51457605	missense	probably damaging	0.98
R1753:Nfe2l3	UTSW	6	51433412	missense	probably null	0.96
R1946:Nfe2l3	UTSW	6	51457315	missense	probably damaging	1.00
R3807:Nfe2l3	UTSW	6	51457377	nonsense	probably null
R3932:Nfe2l3	UTSW	6	51456615	missense	possibly damaging	0.94
R4271:Nfe2l3	UTSW	6	51456634	missense	probably damaging	0.99
R4604:Nfe2l3	UTSW	6	51451012	missense	probably damaging	0.99
R4816:Nfe2l3	UTSW	6	51456624	missense	probably damaging	0.99
R5765:Nfe2l3	UTSW	6	51457246	missense	probably damaging	1.00
R5893:Nfe2l3	UTSW	6	51457852	missense	probably damaging	1.00
R7378:Nfe2l3	UTSW	6	51457296	nonsense	probably null
R7490:Nfe2l3	UTSW	6	51457544	missense	possibly damaging	0.65
R7624:Nfe2l3	UTSW	6	51458272	missense	probably damaging	1.00
R8210:Nfe2l3	UTSW	6	51451085	missense	probably benign	0.00
R8678:Nfe2l3	UTSW	6	51458173	missense	possibly damaging	0.54
R9071:Nfe2l3	UTSW	6	51457263	missense	probably benign	0.01
R9146:Nfe2l3	UTSW	6	51433192	missense	probably damaging	0.99
Z1177:Nfe2l3	UTSW	6	51433297	missense	possibly damaging	0.94

Predicted Primers

PCR Primer
(F):5'- CTGCTCAGAACTGCCGTAAAC -3'
(R):5'- GGATTCTCCCAACTTCACAGAAG -3'

Sequencing Primer
(F):5'- GAACTGCCGTAAACGTAAACTAG -3'
(R):5'- CTTCACAGAAGCATAATCTTGATTCC -3'

Posted On

2014-08-25