Mutagenetix > Incidental Mutation

Incidental Mutation 'R2049:Kmt2c'

226210

Institutional Source

Beutler Lab

Gene Symbol

Kmt2c

Ensembl Gene

ENSMUSG00000038056

Gene Name

lysine (K)-specific methyltransferase 2C

Synonyms

Mll3, E330008K23Rik, HALR

MMRRC Submission

040056-MU

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R2049 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

25271798-25498783 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

C to A at 25285079 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Glutamine to Histidine at position 4287 (Q4287H)

Ref Sequence

ENSEMBL: ENSMUSP00000043874 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000045291] [ENSMUST00000174734]

AlphaFold

no structure available at present

Predicted Effect

probably damaging
Transcript: ENSMUST00000045291
AA Change: Q4287H

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000043874
Gene: ENSMUSG00000038056
AA Change: Q4287H

Domain	Start	End	E-Value	Type
low complexity region	9	32	N/A	INTRINSIC
AT_hook	34	46	9.68e-1	SMART
low complexity region	73	87	N/A	INTRINSIC
PHD	283	330	2.56e-2	SMART
C1	329	384	5.45e-1	SMART
PHD	342	388	4.19e-7	SMART
RING	343	387	1.45e-1	SMART
PHD	389	435	4.77e-11	SMART
RING	390	434	1.46e0	SMART
PHD	465	517	8.25e-6	SMART
low complexity region	776	789	N/A	INTRINSIC
AT_hook	898	910	1.41e2	SMART
PHD	953	1002	2.89e-10	SMART
RING	954	1001	4.74e0	SMART
C1	994	1045	8.38e-2	SMART
PHD	1003	1049	1.05e-12	SMART
PHD	1080	1131	2.08e-2	SMART
low complexity region	1189	1201	N/A	INTRINSIC
low complexity region	1337	1348	N/A	INTRINSIC
low complexity region	1394	1406	N/A	INTRINSIC
low complexity region	1431	1442	N/A	INTRINSIC
low complexity region	1520	1539	N/A	INTRINSIC
low complexity region	1557	1570	N/A	INTRINSIC
HMG	1639	1703	2.64e-3	SMART
low complexity region	1708	1724	N/A	INTRINSIC
coiled coil region	1745	1789	N/A	INTRINSIC
low complexity region	1847	1860	N/A	INTRINSIC
low complexity region	1864	1891	N/A	INTRINSIC
internal_repeat_3	1893	2084	1.27e-14	PROSPERO
internal_repeat_3	2123	2306	1.27e-14	PROSPERO
low complexity region	2336	2348	N/A	INTRINSIC
low complexity region	2375	2394	N/A	INTRINSIC
low complexity region	2427	2440	N/A	INTRINSIC
low complexity region	2516	2527	N/A	INTRINSIC
low complexity region	2696	2720	N/A	INTRINSIC
low complexity region	2723	2742	N/A	INTRINSIC
low complexity region	2930	2943	N/A	INTRINSIC
coiled coil region	3048	3075	N/A	INTRINSIC
low complexity region	3156	3165	N/A	INTRINSIC
low complexity region	3173	3195	N/A	INTRINSIC
coiled coil region	3226	3270	N/A	INTRINSIC
low complexity region	3277	3290	N/A	INTRINSIC
coiled coil region	3389	3427	N/A	INTRINSIC
low complexity region	3460	3486	N/A	INTRINSIC
low complexity region	3597	3611	N/A	INTRINSIC
low complexity region	3649	3667	N/A	INTRINSIC
low complexity region	3769	3783	N/A	INTRINSIC
low complexity region	3822	3827	N/A	INTRINSIC
low complexity region	3860	3869	N/A	INTRINSIC
low complexity region	3887	3904	N/A	INTRINSIC
low complexity region	3994	4009	N/A	INTRINSIC
low complexity region	4015	4038	N/A	INTRINSIC
low complexity region	4293	4309	N/A	INTRINSIC
low complexity region	4412	4419	N/A	INTRINSIC
PHD	4454	4500	2.94e-2	SMART
RING	4455	4499	8.1e0	SMART
FYRN	4554	4597	1.18e-21	SMART
FYRC	4603	4690	4.54e-32	SMART
SET	4764	4886	3.17e-34	SMART
PostSET	4888	4904	1.82e-6	SMART

Predicted Effect

unknown
Transcript: ENSMUST00000172556
AA Change: Q1134H

SMART Domains

Protein: ENSMUSP00000133941
Gene: ENSMUSG00000038056
AA Change: Q1134H

Domain	Start	End	E-Value	Type
SCOP:d2spca_	84	177	1e-3	SMART
low complexity region	196	209	N/A	INTRINSIC
coiled coil region	307	345	N/A	INTRINSIC
low complexity region	379	405	N/A	INTRINSIC
low complexity region	516	530	N/A	INTRINSIC
low complexity region	568	586	N/A	INTRINSIC
low complexity region	688	702	N/A	INTRINSIC
low complexity region	735	752	N/A	INTRINSIC
low complexity region	842	857	N/A	INTRINSIC
low complexity region	863	886	N/A	INTRINSIC
low complexity region	1141	1157	N/A	INTRINSIC
low complexity region	1260	1267	N/A	INTRINSIC
PHD	1302	1348	2.94e-2	SMART
FYRN	1402	1445	1.18e-21	SMART
FYRC	1451	1538	4.54e-32	SMART
SET	1608	1730	3.17e-34	SMART
PostSET	1732	1748	1.82e-6	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000172707

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000173673

Predicted Effect

probably benign
Transcript: ENSMUST00000174734
AA Change: Q907H

PolyPhen 2 Score 0.164 (Sensitivity: 0.92; Specificity: 0.87)

SMART Domains

Protein: ENSMUSP00000133482
Gene: ENSMUSG00000038056
AA Change: Q907H

Domain	Start	End	E-Value	Type
low complexity region	49	75	N/A	INTRINSIC
low complexity region	186	200	N/A	INTRINSIC
low complexity region	238	256	N/A	INTRINSIC
low complexity region	358	372	N/A	INTRINSIC
low complexity region	411	416	N/A	INTRINSIC
low complexity region	449	458	N/A	INTRINSIC
low complexity region	614	629	N/A	INTRINSIC
low complexity region	635	658	N/A	INTRINSIC
low complexity region	913	929	N/A	INTRINSIC
low complexity region	1032	1039	N/A	INTRINSIC
PHD	1074	1120	2.94e-2	SMART
FYRN	1174	1217	1.18e-21	SMART
FYRC	1223	1310	4.54e-32	SMART
SET	1384	1506	3.17e-34	SMART
PostSET	1508	1524	1.82e-6	SMART

Meta Mutation Damage Score

0.0809

Coding Region Coverage

1x: 99.1%
3x: 98.6%
10x: 97.3%
20x: 95.3%

Validation Efficiency

97% (118/122)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is a member of the myeloid/lymphoid or mixed-lineage leukemia (MLL) family and encodes a nuclear protein with an AT hook DNA-binding domain, a DHHC-type zinc finger, six PHD-type zinc fingers, a SET domain, a post-SET domain and a RING-type zinc finger. This protein is a member of the ASC-2/NCOA6 complex (ASCOM), which possesses histone methylation activity and is involved in transcriptional coactivation. [provided by RefSeq, Jul 2008]
PHENOTYPE: Mice homozygous for a knock-out allele display partial embryonic lethality, delayed eyelid opening, postnatal growth retardation, impaired fertility in both sexes, and decreased proliferation of cultured mouse embryonic fibroblasts. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 118 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4931414P19Rik	G	A	14: 54,584,987 (GRCm38)	R8*	probably null	Het
Abhd17a	A	G	10: 80,585,606 (GRCm38)		probably null	Het
Acsm1	A	G	7: 119,656,039 (GRCm38)	R415G	probably damaging	Het
Acta1	G	T	8: 123,892,064 (GRCm38)	T360N	probably benign	Het
Adam6a	T	A	12: 113,544,429 (GRCm38)	S141T	probably benign	Het
Adgrd1	G	T	5: 129,115,095 (GRCm38)	K76N	probably benign	Het
Afdn	A	G	17: 13,810,433 (GRCm38)	E202G	probably damaging	Het
Agps	T	A	2: 75,858,926 (GRCm38)	M156K	probably benign	Het
Agxt	A	G	1: 93,137,315 (GRCm38)	I149V	probably benign	Het
Aqp2	A	G	15: 99,579,366 (GRCm38)	T72A	probably damaging	Het
Arhgap18	T	A	10: 26,849,942 (GRCm38)	D54E	probably benign	Het
Asb8	C	A	15: 98,136,069 (GRCm38)	E202*	probably null	Het
Bmp5	A	G	9: 75,893,790 (GRCm38)	I401V	probably damaging	Het
Bscl2	T	C	19: 8,845,320 (GRCm38)		probably null	Het
Capn9	G	A	8: 124,605,711 (GRCm38)	G430R	possibly damaging	Het
Cd55	C	T	1: 130,449,423 (GRCm38)	V333I	probably benign	Het
Cep112	A	G	11: 108,606,325 (GRCm38)	E697G	probably damaging	Het
Cerk	G	A	15: 86,142,808 (GRCm38)	S167L	probably benign	Het
Chrm3	T	A	13: 9,878,335 (GRCm38)	I222F	probably damaging	Het
Clcn6	A	G	4: 148,024,137 (GRCm38)	F145S	possibly damaging	Het
Cnksr1	A	G	4: 134,229,628 (GRCm38)	Y488H	probably damaging	Het
Cntrl	CAGAG	CAG	2: 35,122,806 (GRCm38)		probably null	Het
Commd10	A	T	18: 46,963,747 (GRCm38)	T74S	probably benign	Het
Cyp4f39	T	C	17: 32,482,138 (GRCm38)	F201L	probably benign	Het
Dennd4a	A	G	9: 64,889,605 (GRCm38)	T860A	possibly damaging	Het
Dlg5	A	T	14: 24,154,647 (GRCm38)	I1253N	probably damaging	Het
Dnah7b	T	A	1: 46,268,670 (GRCm38)	M3048K	probably damaging	Het
Dnah9	A	G	11: 66,044,683 (GRCm38)	M1970T	probably damaging	Het
Doxl2	T	A	6: 48,977,755 (GRCm38)	L609*	probably null	Het
Dsc3	A	T	18: 19,989,680 (GRCm38)	D62E	possibly damaging	Het
Dsel	T	C	1: 111,859,457 (GRCm38)	N1116S	probably benign	Het
Dusp7	C	T	9: 106,373,897 (GRCm38)	T407M	probably damaging	Het
Efnb1	A	G	X: 99,147,517 (GRCm38)	Y343C	probably damaging	Het
Entpd5	A	G	12: 84,396,858 (GRCm38)	I12T	probably benign	Het
Espn	T	C	4: 152,121,257 (GRCm38)	E408G	probably damaging	Het
Fam160a2	A	T	7: 105,389,839 (GRCm38)	D64E	probably damaging	Het
Gdpd3	A	G	7: 126,768,594 (GRCm38)	T200A	probably damaging	Het
Gli1	A	G	10: 127,336,727 (GRCm38)	L182P	probably damaging	Het
Gm4907	T	A	X: 23,907,310 (GRCm38)	V350E	probably benign	Het
Gm5134	G	A	10: 76,004,884 (GRCm38)	A521T	possibly damaging	Het
Gm8300	A	G	12: 87,517,276 (GRCm38)	D127G	unknown	Het
Gm960	A	G	19: 4,698,605 (GRCm38)		probably benign	Het
Gprasp1	G	A	X: 135,802,042 (GRCm38)	E995K	possibly damaging	Het
H2-M10.1	T	C	17: 36,325,216 (GRCm38)	D153G	possibly damaging	Het
Helb	A	T	10: 120,106,021 (GRCm38)	M254K	possibly damaging	Het
I0C0044D17Rik	A	G	4: 98,820,296 (GRCm38)		probably benign	Het
Igfn1	T	A	1: 135,970,638 (GRCm38)	Q730L	probably benign	Het
Igfn1	AGGG	AGG	1: 135,974,852 (GRCm38)		probably benign	Het
Ipo9	A	G	1: 135,402,250 (GRCm38)	V484A	probably benign	Het
Ipo9	ATCCTCCTCCTCCTCCTC	ATCCTCCTCCTCCTCCTCCTC	1: 135,386,268 (GRCm38)		probably benign	Het
Jmjd1c	T	A	10: 67,157,998 (GRCm38)	L86*	probably null	Het
Kat5	T	A	19: 5,605,685 (GRCm38)		probably null	Het
Kif14	A	G	1: 136,510,167 (GRCm38)	E1199G	possibly damaging	Het
Kif14	A	G	1: 136,487,080 (GRCm38)	N768S	probably benign	Het
Klhl29	A	G	12: 5,137,876 (GRCm38)	S163P	probably damaging	Het
Krt82	T	A	15: 101,545,156 (GRCm38)	Q265L	probably damaging	Het
Macf1	C	T	4: 123,355,102 (GRCm38)	C7210Y	probably damaging	Het
Mx2	G	A	16: 97,538,703 (GRCm38)	E20K	probably benign	Het
Myom2	T	G	8: 15,106,379 (GRCm38)	I742S	probably damaging	Het
Narf	A	T	11: 121,250,369 (GRCm38)	R310*	probably null	Het
Nktr	T	A	9: 121,741,694 (GRCm38)	D167E	probably damaging	Het
Nle1	A	G	11: 82,905,366 (GRCm38)	W183R	probably damaging	Het
Npas3	A	G	12: 54,062,088 (GRCm38)	N425S	probably damaging	Het
Obsl1	G	A	1: 75,486,756 (GRCm38)	T1764M	probably benign	Het
Olfr1197	A	T	2: 88,728,745 (GRCm38)	Y285N	probably damaging	Het
Olfr1240	C	T	2: 89,439,583 (GRCm38)	R232H	probably benign	Het
Olfr283	G	A	15: 98,378,396 (GRCm38)	T238I	possibly damaging	Het
Olfr816	A	G	10: 129,912,167 (GRCm38)	V37A	probably benign	Het
Olfr965	A	T	9: 39,720,115 (GRCm38)	D296V	probably damaging	Het
Olfr984	T	A	9: 40,101,119 (GRCm38)	I124L	probably benign	Het
Optc	A	T	1: 133,903,796 (GRCm38)		probably null	Het
Otol1	T	A	3: 70,018,836 (GRCm38)	F115I	probably benign	Het
Parp8	T	A	13: 116,894,886 (GRCm38)	D430V	probably benign	Het
Pex7	T	A	10: 19,894,315 (GRCm38)	H123L	probably damaging	Het
Pkhd1l1	G	A	15: 44,581,741 (GRCm38)	D3670N	probably damaging	Het
Pkhd1l1	T	A	15: 44,547,513 (GRCm38)		probably benign	Het
Plec	T	C	15: 76,183,174 (GRCm38)	T1331A	probably benign	Het
Plekha4	A	G	7: 45,553,798 (GRCm38)	D704G	probably benign	Het
Plxnb2	T	A	15: 89,159,002 (GRCm38)	N1453I	probably damaging	Het
Pms1	T	A	1: 53,281,988 (GRCm38)	I29F	probably damaging	Het
Ppp1r1a	G	A	15: 103,531,406 (GRCm38)	T153I	probably damaging	Het
Pramef8	T	A	4: 143,416,871 (GRCm38)	L69Q	probably damaging	Het
Prelp	C	T	1: 133,915,131 (GRCm38)	R92K	probably benign	Het
Ptpre	A	G	7: 135,670,695 (GRCm38)		probably benign	Het
Ptprt	A	T	2: 161,534,545 (GRCm38)	I1312N	probably damaging	Het
Ren1	C	G	1: 133,350,778 (GRCm38)		probably null	Het
Rims1	C	T	1: 22,596,435 (GRCm38)	C155Y	probably damaging	Het
Slitrk6	T	G	14: 110,750,794 (GRCm38)	T494P	probably benign	Het
Sltm	G	A	9: 70,581,301 (GRCm38)	G578S	probably benign	Het
Smyd5	A	G	6: 85,444,318 (GRCm38)	E338G	probably benign	Het
Snx2	G	A	18: 53,194,444 (GRCm38)	V81M	probably damaging	Het
Sp2	G	T	11: 96,961,365 (GRCm38)	N244K	probably benign	Het
Sspo	C	A	6: 48,460,763 (GRCm38)		probably benign	Het
Sspo	A	C	6: 48,463,531 (GRCm38)	D1568A	probably benign	Het
Ssrp1	T	C	2: 85,041,427 (GRCm38)		probably benign	Het
Syt2	ACTCTCTCT	ACTCTCTCTCT	1: 134,746,741 (GRCm38)		probably benign	Het
Syt7	G	A	19: 10,439,213 (GRCm38)	R138Q	probably benign	Het
Taar7f	T	C	10: 24,050,425 (GRCm38)	Y306H	possibly damaging	Het
Tbccd1	T	C	16: 22,818,541 (GRCm38)		probably null	Het
Tex261	A	G	6: 83,772,259 (GRCm38)	Y119H	probably damaging	Het
Tmem131l	T	G	3: 83,942,788 (GRCm38)	E234D	probably damaging	Het
Tnnt2	TG	TGG	1: 135,846,761 (GRCm38)		probably benign	Het
Trove2	T	C	1: 143,760,034 (GRCm38)	D458G	probably benign	Het
Ttn	C	T	2: 76,813,339 (GRCm38)	G11436R	probably damaging	Het
Ubap1	C	T	4: 41,379,257 (GRCm38)	A157V	probably damaging	Het
Ubr4	C	T	4: 139,477,207 (GRCm38)	T4810M	probably damaging	Het
Uso1	G	A	5: 92,181,936 (GRCm38)	G427R	probably damaging	Het
Usp15	A	T	10: 123,119,137 (GRCm38)	V912D	probably damaging	Het
Vmn1r20	T	C	6: 57,431,958 (GRCm38)	S90P	probably damaging	Het
Vmn1r32	T	C	6: 66,553,561 (GRCm38)	K77R	probably damaging	Het
Vmn2r100	A	G	17: 19,522,050 (GRCm38)	K229E	probably benign	Het
Vmn2r106	A	G	17: 20,268,304 (GRCm38)	V611A	possibly damaging	Het
Xrcc6	T	A	15: 82,022,977 (GRCm38)	F167I	probably damaging	Het
Zbtb21	G	T	16: 97,950,155 (GRCm38)	P804H	probably damaging	Het
Zdhhc3	T	C	9: 123,100,537 (GRCm38)	D11G	probably damaging	Het
Zfhx3	A	G	8: 108,945,177 (GRCm38)	T1324A	probably benign	Het
Zfp281	GCGGCAGCTCCGGCAGC	GCGGCAGCTCCGGCAGCTCCGGCAGC	1: 136,625,353 (GRCm38)		probably benign	Het
Zfp608	G	T	18: 54,895,565 (GRCm38)	L1259I	probably damaging	Het

Other mutations in Kmt2c

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00436:Kmt2c	APN	5	25,281,261 (GRCm38)	missense	probably damaging	0.99
IGL00694:Kmt2c	APN	5	25,293,161 (GRCm38)	missense	probably damaging	0.99
IGL00780:Kmt2c	APN	5	25,311,051 (GRCm38)	missense	probably benign	0.00
IGL00811:Kmt2c	APN	5	25,374,533 (GRCm38)	missense	possibly damaging	0.75
IGL00885:Kmt2c	APN	5	25,409,171 (GRCm38)	missense	possibly damaging	0.80
IGL00948:Kmt2c	APN	5	25,377,161 (GRCm38)	missense	probably benign	0.08
IGL00959:Kmt2c	APN	5	25,276,229 (GRCm38)	missense	probably damaging	1.00
IGL01022:Kmt2c	APN	5	25,302,701 (GRCm38)	unclassified	probably benign
IGL01146:Kmt2c	APN	5	25,308,512 (GRCm38)	missense	probably damaging	0.96
IGL01154:Kmt2c	APN	5	25,284,399 (GRCm38)	missense	probably damaging	1.00
IGL01434:Kmt2c	APN	5	25,409,308 (GRCm38)	missense	probably damaging	1.00
IGL01464:Kmt2c	APN	5	25,352,244 (GRCm38)	missense	possibly damaging	0.90
IGL01525:Kmt2c	APN	5	25,329,441 (GRCm38)	splice site	probably benign
IGL01530:Kmt2c	APN	5	25,313,500 (GRCm38)	missense	probably benign	0.08
IGL01550:Kmt2c	APN	5	25,281,276 (GRCm38)	missense	probably damaging	1.00
IGL01598:Kmt2c	APN	5	25,273,666 (GRCm38)	makesense	probably null
IGL01598:Kmt2c	APN	5	25,354,771 (GRCm38)	missense	probably damaging	1.00
IGL01608:Kmt2c	APN	5	25,354,811 (GRCm38)	missense	probably damaging	0.97
IGL01663:Kmt2c	APN	5	25,310,670 (GRCm38)	missense	probably damaging	1.00
IGL01707:Kmt2c	APN	5	25,300,098 (GRCm38)	missense	probably damaging	1.00
IGL01714:Kmt2c	APN	5	25,313,400 (GRCm38)	missense	probably benign
IGL01784:Kmt2c	APN	5	25,313,526 (GRCm38)	missense	probably damaging	1.00
IGL01813:Kmt2c	APN	5	25,290,804 (GRCm38)	missense	possibly damaging	0.82
IGL01825:Kmt2c	APN	5	25,310,596 (GRCm38)	missense	probably damaging	1.00
IGL01834:Kmt2c	APN	5	25,395,455 (GRCm38)	missense	probably benign	0.05
IGL02072:Kmt2c	APN	5	25,405,432 (GRCm38)	missense	possibly damaging	0.96
IGL02159:Kmt2c	APN	5	25,311,343 (GRCm38)	missense	probably benign	0.18
IGL02303:Kmt2c	APN	5	25,310,157 (GRCm38)	missense	probably damaging	0.96
IGL02417:Kmt2c	APN	5	25,373,020 (GRCm38)	missense	probably benign
IGL02578:Kmt2c	APN	5	25,366,200 (GRCm38)	intron	probably benign
IGL02811:Kmt2c	APN	5	25,315,028 (GRCm38)	nonsense	probably null
IGL02943:Kmt2c	APN	5	25,290,823 (GRCm38)	missense	probably damaging	1.00
IGL03000:Kmt2c	APN	5	25,284,172 (GRCm38)	missense	probably damaging	1.00
IGL03040:Kmt2c	APN	5	25,310,352 (GRCm38)	missense	probably benign
IGL03076:Kmt2c	APN	5	25,299,151 (GRCm38)	nonsense	probably null
IGL03088:Kmt2c	APN	5	25,299,804 (GRCm38)	missense	probably damaging	0.99
IGL03131:Kmt2c	APN	5	25,315,361 (GRCm38)	missense	probably benign	0.00
FR4304:Kmt2c	UTSW	5	25,315,766 (GRCm38)	small insertion	probably benign
FR4976:Kmt2c	UTSW	5	25,315,763 (GRCm38)	small insertion	probably benign
PIT4520001:Kmt2c	UTSW	5	25,315,666 (GRCm38)	missense	probably benign	0.12
PIT4585001:Kmt2c	UTSW	5	25,315,106 (GRCm38)	missense	probably benign	0.21
R0313:Kmt2c	UTSW	5	25,344,930 (GRCm38)	missense	probably damaging	1.00
R0374:Kmt2c	UTSW	5	25,309,708 (GRCm38)	missense	probably damaging	1.00
R0411:Kmt2c	UTSW	5	25,375,957 (GRCm38)	missense	probably damaging	1.00
R0422:Kmt2c	UTSW	5	25,315,664 (GRCm38)	missense	probably benign
R0453:Kmt2c	UTSW	5	25,354,747 (GRCm38)	missense	probably damaging	1.00
R0616:Kmt2c	UTSW	5	25,299,252 (GRCm38)	missense	probably benign
R0619:Kmt2c	UTSW	5	25,298,916 (GRCm38)	missense	probably benign	0.21
R0671:Kmt2c	UTSW	5	25,404,365 (GRCm38)	missense	probably damaging	1.00
R0736:Kmt2c	UTSW	5	25,295,434 (GRCm38)	missense	probably benign
R0745:Kmt2c	UTSW	5	25,359,698 (GRCm38)	splice site	probably null
R0760:Kmt2c	UTSW	5	25,353,317 (GRCm38)	missense	possibly damaging	0.68
R0784:Kmt2c	UTSW	5	25,310,895 (GRCm38)	missense	probably benign	0.00
R0882:Kmt2c	UTSW	5	25,295,607 (GRCm38)	missense	possibly damaging	0.90
R0893:Kmt2c	UTSW	5	25,351,270 (GRCm38)	splice site	probably benign
R0942:Kmt2c	UTSW	5	25,315,303 (GRCm38)	missense	probably benign	0.10
R1110:Kmt2c	UTSW	5	25,314,362 (GRCm38)	missense	probably benign	0.01
R1137:Kmt2c	UTSW	5	25,310,983 (GRCm38)	missense	possibly damaging	0.80
R1255:Kmt2c	UTSW	5	25,351,153 (GRCm38)	missense	probably damaging	1.00
R1300:Kmt2c	UTSW	5	25,405,454 (GRCm38)	missense	probably damaging	0.99
R1497:Kmt2c	UTSW	5	25,314,515 (GRCm38)	missense	possibly damaging	0.80
R1594:Kmt2c	UTSW	5	25,314,878 (GRCm38)	missense	probably benign	0.01
R1611:Kmt2c	UTSW	5	25,359,311 (GRCm38)	critical splice donor site	probably null
R1617:Kmt2c	UTSW	5	25,375,927 (GRCm38)	missense	probably benign	0.01
R1720:Kmt2c	UTSW	5	25,299,184 (GRCm38)	missense	probably benign	0.05
R1723:Kmt2c	UTSW	5	25,315,005 (GRCm38)	missense	probably damaging	1.00
R1724:Kmt2c	UTSW	5	25,315,005 (GRCm38)	missense	probably damaging	1.00
R1726:Kmt2c	UTSW	5	25,315,005 (GRCm38)	missense	probably damaging	1.00
R1736:Kmt2c	UTSW	5	25,290,527 (GRCm38)	missense	probably damaging	1.00
R1778:Kmt2c	UTSW	5	25,372,974 (GRCm38)	missense	probably benign	0.02
R1809:Kmt2c	UTSW	5	25,284,192 (GRCm38)	missense	probably damaging	1.00
R1845:Kmt2c	UTSW	5	25,373,436 (GRCm38)	missense	probably benign	0.45
R1895:Kmt2c	UTSW	5	25,315,154 (GRCm38)	missense	probably benign	0.34
R1946:Kmt2c	UTSW	5	25,315,154 (GRCm38)	missense	probably benign	0.34
R1989:Kmt2c	UTSW	5	25,498,544 (GRCm38)	missense	possibly damaging	0.93
R2039:Kmt2c	UTSW	5	25,329,040 (GRCm38)	missense	possibly damaging	0.53
R2079:Kmt2c	UTSW	5	25,352,280 (GRCm38)	missense	possibly damaging	0.82
R2080:Kmt2c	UTSW	5	25,354,717 (GRCm38)	missense	probably damaging	1.00
R2107:Kmt2c	UTSW	5	25,309,824 (GRCm38)	missense	probably benign	0.01
R2186:Kmt2c	UTSW	5	25,287,112 (GRCm38)	missense	probably damaging	1.00
R2395:Kmt2c	UTSW	5	25,315,152 (GRCm38)	missense	probably benign
R2983:Kmt2c	UTSW	5	25,315,757 (GRCm38)	small deletion	probably benign
R3109:Kmt2c	UTSW	5	25,275,735 (GRCm38)	missense	probably damaging	1.00
R3500:Kmt2c	UTSW	5	25,299,479 (GRCm38)	missense	probably benign	0.02
R3738:Kmt2c	UTSW	5	25,405,383 (GRCm38)	missense	probably benign	0.41
R3809:Kmt2c	UTSW	5	25,409,138 (GRCm38)	missense	possibly damaging	0.87
R4088:Kmt2c	UTSW	5	25,287,713 (GRCm38)	missense	probably benign
R4107:Kmt2c	UTSW	5	25,298,920 (GRCm38)	missense	possibly damaging	0.51
R4212:Kmt2c	UTSW	5	25,347,359 (GRCm38)	critical splice donor site	probably null
R4376:Kmt2c	UTSW	5	25,315,326 (GRCm38)	missense	probably benign	0.00
R4377:Kmt2c	UTSW	5	25,315,326 (GRCm38)	missense	probably benign	0.00
R4383:Kmt2c	UTSW	5	25,351,062 (GRCm38)	missense	possibly damaging	0.77
R4435:Kmt2c	UTSW	5	25,314,877 (GRCm38)	missense	possibly damaging	0.63
R4456:Kmt2c	UTSW	5	25,310,212 (GRCm38)	missense	probably benign
R4461:Kmt2c	UTSW	5	25,299,876 (GRCm38)	missense	probably benign	0.00
R4519:Kmt2c	UTSW	5	25,363,477 (GRCm38)	missense	probably damaging	1.00
R4550:Kmt2c	UTSW	5	25,300,174 (GRCm38)	missense	probably damaging	1.00
R4557:Kmt2c	UTSW	5	25,300,315 (GRCm38)	missense	probably damaging	1.00
R4610:Kmt2c	UTSW	5	25,354,384 (GRCm38)	missense	probably damaging	1.00
R4671:Kmt2c	UTSW	5	25,366,177 (GRCm38)	missense	probably damaging	1.00
R4704:Kmt2c	UTSW	5	25,314,027 (GRCm38)	nonsense	probably null
R4781:Kmt2c	UTSW	5	25,443,825 (GRCm38)	missense	probably damaging	1.00
R4844:Kmt2c	UTSW	5	25,315,113 (GRCm38)	missense	probably benign
R4855:Kmt2c	UTSW	5	25,314,557 (GRCm38)	missense	probably benign	0.00
R4919:Kmt2c	UTSW	5	25,314,395 (GRCm38)	missense	possibly damaging	0.80
R4971:Kmt2c	UTSW	5	25,310,872 (GRCm38)	missense	probably benign	0.00
R4983:Kmt2c	UTSW	5	25,295,511 (GRCm38)	missense	possibly damaging	0.51
R5012:Kmt2c	UTSW	5	25,299,712 (GRCm38)	nonsense	probably null
R5033:Kmt2c	UTSW	5	25,314,708 (GRCm38)	missense	probably benign	0.03
R5093:Kmt2c	UTSW	5	25,409,207 (GRCm38)	missense	probably benign	0.17
R5125:Kmt2c	UTSW	5	25,284,381 (GRCm38)	missense	probably damaging	0.99
R5231:Kmt2c	UTSW	5	25,315,473 (GRCm38)	missense	possibly damaging	0.89
R5254:Kmt2c	UTSW	5	25,314,594 (GRCm38)	missense	probably benign	0.01
R5396:Kmt2c	UTSW	5	25,294,734 (GRCm38)	splice site	probably null
R5415:Kmt2c	UTSW	5	25,314,701 (GRCm38)	missense	probably benign	0.21
R5523:Kmt2c	UTSW	5	25,299,339 (GRCm38)	missense	probably benign	0.00
R5554:Kmt2c	UTSW	5	25,294,610 (GRCm38)	missense	probably damaging	1.00
R5701:Kmt2c	UTSW	5	25,314,017 (GRCm38)	missense	probably benign	0.16
R5762:Kmt2c	UTSW	5	25,310,457 (GRCm38)	missense	probably benign	0.01
R5819:Kmt2c	UTSW	5	25,409,132 (GRCm38)	critical splice donor site	probably null
R5838:Kmt2c	UTSW	5	25,284,471 (GRCm38)	missense	probably damaging	1.00
R5912:Kmt2c	UTSW	5	25,347,469 (GRCm38)	missense	possibly damaging	0.80
R5951:Kmt2c	UTSW	5	25,330,803 (GRCm38)	missense	probably benign	0.15
R5988:Kmt2c	UTSW	5	25,311,120 (GRCm38)	missense	probably benign	0.02
R5999:Kmt2c	UTSW	5	25,284,205 (GRCm38)	missense	probably damaging	1.00
R6104:Kmt2c	UTSW	5	25,299,129 (GRCm38)	missense	probably benign
R6254:Kmt2c	UTSW	5	25,349,874 (GRCm38)	missense	possibly damaging	0.94
R6311:Kmt2c	UTSW	5	25,443,818 (GRCm38)	critical splice donor site	probably null
R6329:Kmt2c	UTSW	5	25,315,602 (GRCm38)	missense	probably benign	0.01
R6347:Kmt2c	UTSW	5	25,310,835 (GRCm38)	missense	possibly damaging	0.54
R6364:Kmt2c	UTSW	5	25,309,636 (GRCm38)	missense	probably null	0.99
R6379:Kmt2c	UTSW	5	25,359,341 (GRCm38)	missense	probably damaging	1.00
R6588:Kmt2c	UTSW	5	25,323,789 (GRCm38)	missense	probably damaging	0.99
R6628:Kmt2c	UTSW	5	25,298,928 (GRCm38)	missense	probably benign
R6733:Kmt2c	UTSW	5	25,409,293 (GRCm38)	missense	probably damaging	1.00
R6787:Kmt2c	UTSW	5	25,275,739 (GRCm38)	splice site	probably null
R6816:Kmt2c	UTSW	5	25,405,532 (GRCm38)	splice site	probably null
R6862:Kmt2c	UTSW	5	25,310,517 (GRCm38)	missense	probably damaging	1.00
R7150:Kmt2c	UTSW	5	25,300,362 (GRCm38)	missense	possibly damaging	0.89
R7220:Kmt2c	UTSW	5	25,344,925 (GRCm38)	missense	probably damaging	1.00
R7250:Kmt2c	UTSW	5	25,309,807 (GRCm38)	missense	probably benign	0.00
R7250:Kmt2c	UTSW	5	25,299,491 (GRCm38)	missense	probably damaging	1.00
R7402:Kmt2c	UTSW	5	25,395,420 (GRCm38)	missense	probably damaging	1.00
R7465:Kmt2c	UTSW	5	25,302,849 (GRCm38)	missense	probably damaging	1.00
R7467:Kmt2c	UTSW	5	25,308,532 (GRCm38)	missense	probably damaging	1.00
R7491:Kmt2c	UTSW	5	25,284,564 (GRCm38)	missense	probably damaging	0.99
R7549:Kmt2c	UTSW	5	25,414,970 (GRCm38)	missense	possibly damaging	0.95
R7637:Kmt2c	UTSW	5	25,315,095 (GRCm38)	missense	probably damaging	1.00
R7652:Kmt2c	UTSW	5	25,315,719 (GRCm38)	missense	probably benign	0.01
R7714:Kmt2c	UTSW	5	25,375,366 (GRCm38)	missense	probably benign
R7838:Kmt2c	UTSW	5	25,294,699 (GRCm38)	missense	possibly damaging	0.57
R7891:Kmt2c	UTSW	5	25,300,111 (GRCm38)	missense	probably damaging	1.00
R7892:Kmt2c	UTSW	5	25,299,816 (GRCm38)	missense	probably benign	0.18
R7895:Kmt2c	UTSW	5	25,373,176 (GRCm38)	missense	possibly damaging	0.65
R7960:Kmt2c	UTSW	5	25,315,196 (GRCm38)	missense	probably benign	0.01
R7974:Kmt2c	UTSW	5	25,300,563 (GRCm38)	missense	probably damaging	1.00
R7978:Kmt2c	UTSW	5	25,359,678 (GRCm38)	missense	probably benign	0.00
R8011:Kmt2c	UTSW	5	25,351,234 (GRCm38)	missense	probably damaging	0.99
R8021:Kmt2c	UTSW	5	25,287,119 (GRCm38)	missense	possibly damaging	0.88
R8022:Kmt2c	UTSW	5	25,281,680 (GRCm38)	missense	possibly damaging	0.83
R8079:Kmt2c	UTSW	5	25,302,732 (GRCm38)	missense	probably damaging	0.98
R8087:Kmt2c	UTSW	5	25,329,252 (GRCm38)	missense	probably damaging	1.00
R8109:Kmt2c	UTSW	5	25,281,384 (GRCm38)	missense	probably damaging	1.00
R8161:Kmt2c	UTSW	5	25,374,564 (GRCm38)	missense	probably benign	0.00
R8169:Kmt2c	UTSW	5	25,354,687 (GRCm38)	missense	probably damaging	1.00
R8206:Kmt2c	UTSW	5	25,314,539 (GRCm38)	missense	probably damaging	0.98
R8218:Kmt2c	UTSW	5	25,283,106 (GRCm38)	missense	probably damaging	1.00
R8223:Kmt2c	UTSW	5	25,324,218 (GRCm38)	missense	possibly damaging	0.89
R8260:Kmt2c	UTSW	5	25,405,516 (GRCm38)	missense	possibly damaging	0.87
R8330:Kmt2c	UTSW	5	25,304,694 (GRCm38)	missense	probably null	1.00
R8355:Kmt2c	UTSW	5	25,354,501 (GRCm38)	critical splice acceptor site	probably null
R8455:Kmt2c	UTSW	5	25,354,501 (GRCm38)	critical splice acceptor site	probably null
R8508:Kmt2c	UTSW	5	25,314,122 (GRCm38)	missense	probably benign	0.34
R8885:Kmt2c	UTSW	5	25,315,079 (GRCm38)	missense	probably benign	0.34
R8907:Kmt2c	UTSW	5	25,309,611 (GRCm38)	missense	probably damaging	1.00
R8924:Kmt2c	UTSW	5	25,298,887 (GRCm38)	missense	probably benign
R8969:Kmt2c	UTSW	5	25,314,389 (GRCm38)	missense	possibly damaging	0.82
R9019:Kmt2c	UTSW	5	25,283,210 (GRCm38)	missense	probably damaging	1.00
R9035:Kmt2c	UTSW	5	25,319,012 (GRCm38)	missense	probably damaging	1.00
R9074:Kmt2c	UTSW	5	25,284,345 (GRCm38)	missense	probably damaging	1.00
R9125:Kmt2c	UTSW	5	25,284,196 (GRCm38)	missense	possibly damaging	0.86
R9130:Kmt2c	UTSW	5	25,311,104 (GRCm38)	missense	probably benign	0.01
R9171:Kmt2c	UTSW	5	25,281,311 (GRCm38)	missense	probably damaging	1.00
R9235:Kmt2c	UTSW	5	25,299,999 (GRCm38)	missense	probably damaging	1.00
R9288:Kmt2c	UTSW	5	25,349,862 (GRCm38)	missense	probably benign	0.34
R9288:Kmt2c	UTSW	5	25,292,909 (GRCm38)	missense	probably damaging	1.00
R9336:Kmt2c	UTSW	5	25,409,167 (GRCm38)	missense	probably benign	0.06
R9443:Kmt2c	UTSW	5	25,310,047 (GRCm38)	missense	probably damaging	1.00
R9481:Kmt2c	UTSW	5	25,292,909 (GRCm38)	missense	probably damaging	1.00
R9481:Kmt2c	UTSW	5	25,349,862 (GRCm38)	missense	probably benign	0.34
R9526:Kmt2c	UTSW	5	25,281,357 (GRCm38)	missense	probably damaging	1.00
R9653:Kmt2c	UTSW	5	25,302,821 (GRCm38)	missense	probably damaging	1.00
R9729:Kmt2c	UTSW	5	25,284,760 (GRCm38)	missense	probably damaging	1.00
R9731:Kmt2c	UTSW	5	25,372,958 (GRCm38)	missense	probably benign	0.18
R9784:Kmt2c	UTSW	5	25,344,961 (GRCm38)	missense	probably damaging	1.00
RF001:Kmt2c	UTSW	5	25,315,775 (GRCm38)	small insertion	probably benign
RF006:Kmt2c	UTSW	5	25,315,772 (GRCm38)	small insertion	probably benign
RF011:Kmt2c	UTSW	5	25,338,459 (GRCm38)	missense	probably damaging	1.00
RF041:Kmt2c	UTSW	5	25,315,775 (GRCm38)	small insertion	probably benign
RF047:Kmt2c	UTSW	5	25,315,760 (GRCm38)	small insertion	probably benign
RF051:Kmt2c	UTSW	5	25,313,479 (GRCm38)	unclassified	probably benign
RF055:Kmt2c	UTSW	5	25,315,772 (GRCm38)	small insertion	probably benign
RF059:Kmt2c	UTSW	5	25,313,479 (GRCm38)	unclassified	probably benign
RF063:Kmt2c	UTSW	5	25,315,764 (GRCm38)	small insertion	probably benign
X0024:Kmt2c	UTSW	5	25,405,485 (GRCm38)	missense	probably benign	0.26
X0027:Kmt2c	UTSW	5	25,330,887 (GRCm38)	missense	possibly damaging	0.90
Z1176:Kmt2c	UTSW	5	25,354,413 (GRCm38)	missense	probably damaging	1.00
Z1177:Kmt2c	UTSW	5	25,366,197 (GRCm38)	critical splice acceptor site	probably null
Z1177:Kmt2c	UTSW	5	25,300,003 (GRCm38)	missense	probably benign	0.00
Z1177:Kmt2c	UTSW	5	25,295,397 (GRCm38)	critical splice donor site	probably null

Predicted Primers

PCR Primer
(F):5'- TGGCTTAAAGGTCCCCTTGG -3'
(R):5'- CATCAGTAGACTTGCTTTACTGGC -3'

Sequencing Primer
(F):5'- CTTGGGGATGACAATATGAATGCTCC -3'
(R):5'- GCTTTACTGGCAAGTGAATCC -3'

Posted On

2014-09-17