Incidental Mutation 'R2128:Siglec1'
ID |
227700 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Siglec1
|
Ensembl Gene |
ENSMUSG00000027322 |
Gene Name |
sialic acid binding Ig-like lectin 1, sialoadhesin |
Synonyms |
Sn, CD169, Siglec-1 |
MMRRC Submission |
040131-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.076)
|
Stock # |
R2128 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
2 |
Chromosomal Location |
130911140-130928685 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 130922417 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Tyrosine to Asparagine
at position 553
(Y553N)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000105856
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000028794]
[ENSMUST00000110226]
[ENSMUST00000110227]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000028794
AA Change: Y553N
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000028794 Gene: ENSMUSG00000027322 AA Change: Y553N
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
IG
|
32 |
142 |
2.92e-5 |
SMART |
Pfam:C2-set_2
|
148 |
235 |
9.4e-18 |
PFAM |
IGc2
|
260 |
319 |
8.78e-9 |
SMART |
IGc2
|
344 |
404 |
4.07e-4 |
SMART |
IGc2
|
431 |
505 |
3.3e-4 |
SMART |
IGc2
|
529 |
589 |
5.75e-4 |
SMART |
IGc2
|
622 |
698 |
3.54e-4 |
SMART |
low complexity region
|
700 |
705 |
N/A |
INTRINSIC |
IG
|
716 |
795 |
3.35e-5 |
SMART |
IG
|
804 |
896 |
6.51e-3 |
SMART |
IGc2
|
909 |
969 |
4.13e-5 |
SMART |
IG_like
|
1001 |
1076 |
6.78e-2 |
SMART |
low complexity region
|
1077 |
1088 |
N/A |
INTRINSIC |
IG
|
1094 |
1171 |
4.32e-8 |
SMART |
IG_like
|
1185 |
1250 |
1.94e-2 |
SMART |
IG
|
1268 |
1345 |
1.36e-5 |
SMART |
IG_like
|
1354 |
1447 |
1.45e1 |
SMART |
IG_like
|
1365 |
1435 |
4.51e-2 |
SMART |
IG
|
1454 |
1534 |
4.56e-7 |
SMART |
IG_like
|
1549 |
1624 |
1.21e-1 |
SMART |
transmembrane domain
|
1647 |
1669 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000110226
|
SMART Domains |
Protein: ENSMUSP00000105855 Gene: ENSMUSG00000027322
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
IG
|
32 |
142 |
2.92e-5 |
SMART |
Pfam:C2-set_2
|
148 |
235 |
7.7e-18 |
PFAM |
IGc2
|
260 |
319 |
8.78e-9 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000110227
AA Change: Y553N
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000105856 Gene: ENSMUSG00000027322 AA Change: Y553N
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
IG
|
32 |
142 |
2.92e-5 |
SMART |
Pfam:C2-set_2
|
148 |
235 |
7e-17 |
PFAM |
IGc2
|
260 |
319 |
8.78e-9 |
SMART |
IGc2
|
344 |
404 |
4.07e-4 |
SMART |
IGc2
|
431 |
505 |
3.3e-4 |
SMART |
IGc2
|
529 |
589 |
5.75e-4 |
SMART |
IGc2
|
622 |
698 |
3.54e-4 |
SMART |
low complexity region
|
700 |
705 |
N/A |
INTRINSIC |
IG
|
716 |
795 |
3.35e-5 |
SMART |
IG
|
804 |
896 |
6.51e-3 |
SMART |
IGc2
|
909 |
969 |
4.13e-5 |
SMART |
IG_like
|
1001 |
1076 |
6.78e-2 |
SMART |
low complexity region
|
1077 |
1088 |
N/A |
INTRINSIC |
IG
|
1094 |
1171 |
4.32e-8 |
SMART |
IG_like
|
1185 |
1250 |
1.94e-2 |
SMART |
IG
|
1268 |
1345 |
1.36e-5 |
SMART |
IG_like
|
1354 |
1447 |
1.45e1 |
SMART |
IG_like
|
1365 |
1435 |
4.51e-2 |
SMART |
IG
|
1454 |
1534 |
4.56e-7 |
SMART |
|
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.4%
- 20x: 95.4%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the immunoglobulin superfamily. The encoded protein is a lectin-like adhesion molecule that binds glycoconjugate ligands on cell surfaces in a sialic acid-dependent manner. It is a type I transmembrane protein expressed only by a subpopulation of macrophages and is involved in mediating cell-cell interactions. Alternative splicing produces a transcript variant encoding an isoform that is soluble rather than membrane-bound; however, the full-length nature of this variant has not been determined. [provided by RefSeq, Jul 2008] PHENOTYPE: Mice homozygous for a disruption in this gene display subtle changes in B- and T-cell populations and decreased IgM levels. Mice homozygous for a knock-out or knock-in allele exhibit impaired phagocytosis of sialylated C. jejuni. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 94 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1700113H08Rik |
A |
G |
10: 87,066,066 (GRCm39) |
E249G |
possibly damaging |
Het |
2610028H24Rik |
A |
G |
10: 76,293,349 (GRCm39) |
M136V |
possibly damaging |
Het |
4930523C07Rik |
A |
T |
1: 159,902,945 (GRCm39) |
K72* |
probably null |
Het |
Abca6 |
A |
G |
11: 110,110,475 (GRCm39) |
I558T |
probably benign |
Het |
Acot10 |
T |
C |
15: 20,666,712 (GRCm39) |
T10A |
probably benign |
Het |
Adgrl4 |
T |
A |
3: 151,205,838 (GRCm39) |
D233E |
probably benign |
Het |
Adgrv1 |
A |
T |
13: 81,705,199 (GRCm39) |
F1537Y |
probably damaging |
Het |
Aqp3 |
T |
A |
4: 41,098,061 (GRCm39) |
I17F |
probably benign |
Het |
Arap1 |
T |
A |
7: 101,058,527 (GRCm39) |
L1375H |
probably damaging |
Het |
Aspm |
T |
C |
1: 139,385,373 (GRCm39) |
V339A |
probably benign |
Het |
Atp13a3 |
G |
A |
16: 30,173,094 (GRCm39) |
A261V |
probably damaging |
Het |
Casp8ap2 |
T |
C |
4: 32,640,142 (GRCm39) |
Y399H |
probably benign |
Het |
Cept1 |
A |
G |
3: 106,420,195 (GRCm39) |
V213A |
probably damaging |
Het |
Cit |
A |
G |
5: 116,123,566 (GRCm39) |
D1469G |
possibly damaging |
Het |
Cnga2 |
A |
G |
X: 71,051,394 (GRCm39) |
Y182C |
possibly damaging |
Het |
Cox20 |
A |
G |
1: 178,149,512 (GRCm39) |
I54V |
probably benign |
Het |
Dhx8 |
C |
A |
11: 101,629,235 (GRCm39) |
D261E |
probably benign |
Het |
Dnah2 |
A |
T |
11: 69,349,011 (GRCm39) |
I2486N |
probably benign |
Het |
Dnah5 |
A |
G |
15: 28,408,467 (GRCm39) |
Q3484R |
probably benign |
Het |
Drd1 |
T |
C |
13: 54,207,572 (GRCm39) |
Y207C |
probably damaging |
Het |
Dtl |
C |
T |
1: 191,290,222 (GRCm39) |
V222I |
probably damaging |
Het |
Dync1h1 |
T |
C |
12: 110,607,316 (GRCm39) |
Y2636H |
probably damaging |
Het |
Endog |
C |
A |
2: 30,062,048 (GRCm39) |
D154E |
probably benign |
Het |
Epc1 |
A |
T |
18: 6,462,954 (GRCm39) |
V14E |
probably damaging |
Het |
Ercc4 |
C |
A |
16: 12,965,798 (GRCm39) |
T810K |
probably damaging |
Het |
Fam43b |
T |
A |
4: 138,123,299 (GRCm39) |
N7I |
possibly damaging |
Het |
Fgd1 |
T |
C |
X: 149,869,213 (GRCm39) |
|
probably null |
Het |
Filip1 |
G |
T |
9: 79,726,612 (GRCm39) |
T669N |
probably damaging |
Het |
Fndc1 |
A |
G |
17: 7,997,497 (GRCm39) |
|
probably benign |
Het |
Foxk1 |
C |
A |
5: 142,420,943 (GRCm39) |
S189* |
probably null |
Het |
Gatm |
T |
C |
2: 122,431,017 (GRCm39) |
N274S |
probably damaging |
Het |
Gdf9 |
A |
G |
11: 53,328,334 (GRCm39) |
Y430C |
probably damaging |
Het |
Gga1 |
C |
T |
15: 78,772,648 (GRCm39) |
P260S |
probably damaging |
Het |
Gm11595 |
A |
T |
11: 99,663,327 (GRCm39) |
C118S |
unknown |
Het |
Gm382 |
G |
T |
X: 125,970,274 (GRCm39) |
V820L |
possibly damaging |
Het |
Gzmk |
T |
A |
13: 113,308,548 (GRCm39) |
I179F |
probably damaging |
Het |
Hsp90b1 |
T |
C |
10: 86,531,570 (GRCm39) |
D421G |
probably damaging |
Het |
Hus1 |
A |
G |
11: 8,956,011 (GRCm39) |
M174T |
probably damaging |
Het |
Ifngr2 |
T |
A |
16: 91,359,761 (GRCm39) |
Y289* |
probably null |
Het |
Il6st |
T |
A |
13: 112,640,709 (GRCm39) |
H828Q |
probably benign |
Het |
Impg2 |
T |
A |
16: 56,038,742 (GRCm39) |
Y127N |
probably damaging |
Het |
Irf3 |
T |
A |
7: 44,651,168 (GRCm39) |
W345R |
probably damaging |
Het |
Kif1b |
G |
A |
4: 149,272,097 (GRCm39) |
S1568L |
possibly damaging |
Het |
Klhl42 |
A |
G |
6: 147,003,251 (GRCm39) |
T342A |
probably benign |
Het |
Kndc1 |
G |
T |
7: 139,510,025 (GRCm39) |
R1289L |
probably damaging |
Het |
Knl1 |
A |
T |
2: 118,902,300 (GRCm39) |
T1334S |
possibly damaging |
Het |
L3mbtl3 |
G |
T |
10: 26,189,766 (GRCm39) |
D499E |
unknown |
Het |
Ldhd |
T |
A |
8: 112,353,680 (GRCm39) |
M478L |
probably benign |
Het |
Loxl4 |
C |
G |
19: 42,592,402 (GRCm39) |
E385D |
probably damaging |
Het |
Lrriq1 |
G |
A |
10: 103,050,718 (GRCm39) |
T678I |
probably benign |
Het |
Macf1 |
T |
A |
4: 123,386,567 (GRCm39) |
I1017F |
probably benign |
Het |
Madcam1 |
A |
G |
10: 79,501,406 (GRCm39) |
E157G |
possibly damaging |
Het |
Mamdc4 |
T |
C |
2: 25,459,270 (GRCm39) |
D195G |
probably damaging |
Het |
Mctp1 |
A |
G |
13: 76,972,941 (GRCm39) |
D648G |
probably damaging |
Het |
Mycbp2 |
T |
C |
14: 103,438,666 (GRCm39) |
M2072V |
probably benign |
Het |
Nck1 |
A |
G |
9: 100,379,600 (GRCm39) |
|
probably null |
Het |
Ndufaf4 |
G |
T |
4: 24,898,608 (GRCm39) |
D55Y |
probably damaging |
Het |
Nek11 |
A |
T |
9: 105,177,560 (GRCm39) |
D230E |
probably benign |
Het |
Nit2 |
T |
C |
16: 56,981,559 (GRCm39) |
K67E |
possibly damaging |
Het |
Or12j2 |
C |
T |
7: 139,916,342 (GRCm39) |
T189M |
probably damaging |
Het |
Or5ae1 |
T |
C |
7: 84,565,701 (GRCm39) |
F238S |
probably damaging |
Het |
Or6a2 |
T |
C |
7: 106,600,455 (GRCm39) |
D204G |
probably damaging |
Het |
Or6c1 |
A |
T |
10: 129,518,401 (GRCm39) |
V69E |
possibly damaging |
Het |
Pakap |
A |
G |
4: 57,854,890 (GRCm39) |
Y134C |
probably benign |
Het |
Pccb |
G |
C |
9: 100,867,884 (GRCm39) |
D347E |
probably damaging |
Het |
Plcl1 |
T |
A |
1: 55,736,997 (GRCm39) |
F779L |
probably damaging |
Het |
Prune2 |
C |
A |
19: 17,099,786 (GRCm39) |
D1763E |
probably benign |
Het |
Pwwp2a |
A |
G |
11: 43,596,145 (GRCm39) |
S437G |
probably benign |
Het |
Rabgap1l |
A |
T |
1: 160,566,527 (GRCm39) |
D90E |
probably benign |
Het |
Rapgef4 |
T |
A |
2: 72,056,897 (GRCm39) |
I552N |
possibly damaging |
Het |
Scn7a |
A |
T |
2: 66,528,330 (GRCm39) |
I720K |
probably damaging |
Het |
Scn9a |
T |
A |
2: 66,356,998 (GRCm39) |
N1101I |
probably damaging |
Het |
Slc22a23 |
A |
G |
13: 34,387,953 (GRCm39) |
L381P |
possibly damaging |
Het |
Slc7a11 |
T |
A |
3: 50,338,558 (GRCm39) |
T284S |
probably damaging |
Het |
Slc8a2 |
T |
A |
7: 15,874,417 (GRCm39) |
|
probably null |
Het |
Snx29 |
T |
A |
16: 11,218,835 (GRCm39) |
S224T |
probably damaging |
Het |
Stimate |
T |
C |
14: 30,588,581 (GRCm39) |
Y103H |
probably damaging |
Het |
Stox1 |
T |
C |
10: 62,500,314 (GRCm39) |
T749A |
probably benign |
Het |
Tg |
A |
G |
15: 66,566,743 (GRCm39) |
I1264V |
probably benign |
Het |
Top2a |
A |
C |
11: 98,900,633 (GRCm39) |
V609G |
probably damaging |
Het |
Trmt44 |
G |
A |
5: 35,732,176 (GRCm39) |
P72S |
probably benign |
Het |
Ttll3 |
G |
C |
6: 113,389,895 (GRCm39) |
S760T |
probably benign |
Het |
Ttn |
T |
C |
2: 76,579,022 (GRCm39) |
D23957G |
probably damaging |
Het |
Ttn |
G |
A |
2: 76,664,241 (GRCm39) |
|
probably benign |
Het |
Ubxn1 |
T |
G |
19: 8,849,434 (GRCm39) |
V59G |
probably benign |
Het |
Ubxn4 |
T |
C |
1: 128,172,247 (GRCm39) |
S14P |
probably benign |
Het |
Uso1 |
T |
A |
5: 92,343,229 (GRCm39) |
M771K |
probably benign |
Het |
Utp20 |
A |
G |
10: 88,649,917 (GRCm39) |
F431S |
probably damaging |
Het |
Vmn1r206 |
T |
C |
13: 22,804,782 (GRCm39) |
S142G |
probably benign |
Het |
Vmn2r19 |
A |
G |
6: 123,285,289 (GRCm39) |
|
probably null |
Het |
Vps36 |
G |
T |
8: 22,708,305 (GRCm39) |
|
probably null |
Het |
Wnt3 |
A |
G |
11: 103,703,474 (GRCm39) |
H319R |
possibly damaging |
Het |
Zbtb26 |
G |
T |
2: 37,326,563 (GRCm39) |
Q158K |
probably benign |
Het |
Zfp648 |
T |
C |
1: 154,080,353 (GRCm39) |
S171P |
probably benign |
Het |
|
Other mutations in Siglec1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00482:Siglec1
|
APN |
2 |
130,921,245 (GRCm39) |
missense |
probably benign |
0.03 |
IGL01092:Siglec1
|
APN |
2 |
130,921,137 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01115:Siglec1
|
APN |
2 |
130,916,422 (GRCm39) |
missense |
probably benign |
0.01 |
IGL01324:Siglec1
|
APN |
2 |
130,927,461 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01330:Siglec1
|
APN |
2 |
130,916,925 (GRCm39) |
nonsense |
probably null |
|
IGL01330:Siglec1
|
APN |
2 |
130,925,456 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01558:Siglec1
|
APN |
2 |
130,920,419 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL01632:Siglec1
|
APN |
2 |
130,925,740 (GRCm39) |
missense |
probably benign |
0.03 |
IGL01768:Siglec1
|
APN |
2 |
130,916,314 (GRCm39) |
missense |
probably benign |
|
IGL02399:Siglec1
|
APN |
2 |
130,913,098 (GRCm39) |
missense |
probably benign |
0.16 |
IGL02558:Siglec1
|
APN |
2 |
130,916,915 (GRCm39) |
missense |
possibly damaging |
0.88 |
IGL02794:Siglec1
|
APN |
2 |
130,917,889 (GRCm39) |
missense |
possibly damaging |
0.86 |
IGL02839:Siglec1
|
APN |
2 |
130,926,852 (GRCm39) |
missense |
possibly damaging |
0.82 |
aggressor
|
UTSW |
2 |
130,925,861 (GRCm39) |
nonsense |
probably null |
|
boris
|
UTSW |
2 |
130,921,297 (GRCm39) |
nonsense |
probably null |
|
espia
|
UTSW |
2 |
130,914,664 (GRCm39) |
missense |
probably damaging |
0.98 |
hoodlum
|
UTSW |
2 |
130,914,667 (GRCm39) |
missense |
possibly damaging |
0.88 |
microfische
|
UTSW |
2 |
130,928,015 (GRCm39) |
missense |
possibly damaging |
0.73 |
K3955:Siglec1
|
UTSW |
2 |
130,923,359 (GRCm39) |
missense |
probably benign |
0.00 |
P0038:Siglec1
|
UTSW |
2 |
130,923,359 (GRCm39) |
missense |
probably benign |
0.00 |
PIT4576001:Siglec1
|
UTSW |
2 |
130,920,081 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4677001:Siglec1
|
UTSW |
2 |
130,914,677 (GRCm39) |
missense |
probably damaging |
1.00 |
R0003:Siglec1
|
UTSW |
2 |
130,916,980 (GRCm39) |
missense |
probably benign |
0.00 |
R0048:Siglec1
|
UTSW |
2 |
130,915,317 (GRCm39) |
missense |
possibly damaging |
0.65 |
R0048:Siglec1
|
UTSW |
2 |
130,915,317 (GRCm39) |
missense |
possibly damaging |
0.65 |
R0243:Siglec1
|
UTSW |
2 |
130,927,396 (GRCm39) |
missense |
probably damaging |
1.00 |
R0276:Siglec1
|
UTSW |
2 |
130,925,861 (GRCm39) |
nonsense |
probably null |
|
R0379:Siglec1
|
UTSW |
2 |
130,916,445 (GRCm39) |
splice site |
probably benign |
|
R0464:Siglec1
|
UTSW |
2 |
130,921,279 (GRCm39) |
missense |
probably damaging |
1.00 |
R0507:Siglec1
|
UTSW |
2 |
130,916,445 (GRCm39) |
splice site |
probably benign |
|
R0560:Siglec1
|
UTSW |
2 |
130,912,266 (GRCm39) |
missense |
probably benign |
0.02 |
R0620:Siglec1
|
UTSW |
2 |
130,916,188 (GRCm39) |
missense |
probably benign |
0.30 |
R0621:Siglec1
|
UTSW |
2 |
130,916,188 (GRCm39) |
missense |
probably benign |
0.30 |
R0853:Siglec1
|
UTSW |
2 |
130,926,942 (GRCm39) |
missense |
probably damaging |
0.98 |
R1079:Siglec1
|
UTSW |
2 |
130,921,297 (GRCm39) |
nonsense |
probably null |
|
R1169:Siglec1
|
UTSW |
2 |
130,916,747 (GRCm39) |
missense |
probably damaging |
0.97 |
R1205:Siglec1
|
UTSW |
2 |
130,922,384 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1293:Siglec1
|
UTSW |
2 |
130,915,451 (GRCm39) |
missense |
probably benign |
0.00 |
R1470:Siglec1
|
UTSW |
2 |
130,912,307 (GRCm39) |
missense |
probably benign |
0.19 |
R1470:Siglec1
|
UTSW |
2 |
130,912,307 (GRCm39) |
missense |
probably benign |
0.19 |
R1533:Siglec1
|
UTSW |
2 |
130,918,078 (GRCm39) |
missense |
probably benign |
|
R1717:Siglec1
|
UTSW |
2 |
130,925,932 (GRCm39) |
missense |
probably damaging |
1.00 |
R1717:Siglec1
|
UTSW |
2 |
130,915,876 (GRCm39) |
missense |
possibly damaging |
0.92 |
R1744:Siglec1
|
UTSW |
2 |
130,923,219 (GRCm39) |
missense |
probably damaging |
1.00 |
R1852:Siglec1
|
UTSW |
2 |
130,923,420 (GRCm39) |
missense |
probably damaging |
0.98 |
R1941:Siglec1
|
UTSW |
2 |
130,920,051 (GRCm39) |
missense |
possibly damaging |
0.94 |
R2011:Siglec1
|
UTSW |
2 |
130,925,277 (GRCm39) |
missense |
probably damaging |
1.00 |
R2012:Siglec1
|
UTSW |
2 |
130,925,277 (GRCm39) |
missense |
probably damaging |
1.00 |
R2278:Siglec1
|
UTSW |
2 |
130,913,257 (GRCm39) |
missense |
probably benign |
0.28 |
R2403:Siglec1
|
UTSW |
2 |
130,916,395 (GRCm39) |
missense |
possibly damaging |
0.65 |
R2449:Siglec1
|
UTSW |
2 |
130,920,645 (GRCm39) |
missense |
probably benign |
0.44 |
R2885:Siglec1
|
UTSW |
2 |
130,914,667 (GRCm39) |
missense |
possibly damaging |
0.88 |
R4213:Siglec1
|
UTSW |
2 |
130,916,038 (GRCm39) |
missense |
probably damaging |
1.00 |
R4274:Siglec1
|
UTSW |
2 |
130,927,734 (GRCm39) |
missense |
probably benign |
0.00 |
R4679:Siglec1
|
UTSW |
2 |
130,915,331 (GRCm39) |
missense |
possibly damaging |
0.87 |
R4715:Siglec1
|
UTSW |
2 |
130,916,356 (GRCm39) |
missense |
probably damaging |
1.00 |
R4782:Siglec1
|
UTSW |
2 |
130,917,843 (GRCm39) |
missense |
probably damaging |
1.00 |
R4896:Siglec1
|
UTSW |
2 |
130,911,789 (GRCm39) |
missense |
probably benign |
0.21 |
R4993:Siglec1
|
UTSW |
2 |
130,915,281 (GRCm39) |
missense |
possibly damaging |
0.93 |
R5004:Siglec1
|
UTSW |
2 |
130,915,331 (GRCm39) |
missense |
possibly damaging |
0.87 |
R5004:Siglec1
|
UTSW |
2 |
130,911,789 (GRCm39) |
missense |
probably benign |
0.21 |
R5105:Siglec1
|
UTSW |
2 |
130,922,320 (GRCm39) |
missense |
possibly damaging |
0.69 |
R5137:Siglec1
|
UTSW |
2 |
130,923,264 (GRCm39) |
missense |
probably damaging |
1.00 |
R5153:Siglec1
|
UTSW |
2 |
130,927,497 (GRCm39) |
missense |
probably damaging |
0.99 |
R5311:Siglec1
|
UTSW |
2 |
130,921,236 (GRCm39) |
missense |
probably damaging |
1.00 |
R5600:Siglec1
|
UTSW |
2 |
130,927,503 (GRCm39) |
missense |
probably benign |
0.01 |
R5682:Siglec1
|
UTSW |
2 |
130,925,930 (GRCm39) |
missense |
probably damaging |
1.00 |
R5732:Siglec1
|
UTSW |
2 |
130,916,188 (GRCm39) |
missense |
probably benign |
0.30 |
R5870:Siglec1
|
UTSW |
2 |
130,914,767 (GRCm39) |
missense |
probably damaging |
0.99 |
R5898:Siglec1
|
UTSW |
2 |
130,915,553 (GRCm39) |
missense |
probably damaging |
1.00 |
R5909:Siglec1
|
UTSW |
2 |
130,919,884 (GRCm39) |
missense |
probably damaging |
1.00 |
R6488:Siglec1
|
UTSW |
2 |
130,923,227 (GRCm39) |
missense |
probably damaging |
0.99 |
R6920:Siglec1
|
UTSW |
2 |
130,919,997 (GRCm39) |
nonsense |
probably null |
|
R7064:Siglec1
|
UTSW |
2 |
130,925,834 (GRCm39) |
missense |
probably benign |
0.00 |
R7270:Siglec1
|
UTSW |
2 |
130,923,471 (GRCm39) |
missense |
possibly damaging |
0.67 |
R7355:Siglec1
|
UTSW |
2 |
130,922,371 (GRCm39) |
missense |
probably benign |
0.02 |
R7400:Siglec1
|
UTSW |
2 |
130,928,015 (GRCm39) |
missense |
possibly damaging |
0.73 |
R7470:Siglec1
|
UTSW |
2 |
130,917,744 (GRCm39) |
missense |
probably benign |
0.00 |
R7568:Siglec1
|
UTSW |
2 |
130,914,602 (GRCm39) |
missense |
probably damaging |
1.00 |
R7781:Siglec1
|
UTSW |
2 |
130,923,258 (GRCm39) |
missense |
probably damaging |
1.00 |
R7853:Siglec1
|
UTSW |
2 |
130,923,212 (GRCm39) |
missense |
probably damaging |
1.00 |
R7999:Siglec1
|
UTSW |
2 |
130,913,083 (GRCm39) |
missense |
probably benign |
0.28 |
R8191:Siglec1
|
UTSW |
2 |
130,927,599 (GRCm39) |
missense |
probably damaging |
1.00 |
R8274:Siglec1
|
UTSW |
2 |
130,925,830 (GRCm39) |
missense |
probably benign |
|
R8345:Siglec1
|
UTSW |
2 |
130,920,498 (GRCm39) |
missense |
possibly damaging |
0.95 |
R8670:Siglec1
|
UTSW |
2 |
130,923,387 (GRCm39) |
missense |
probably damaging |
1.00 |
R8814:Siglec1
|
UTSW |
2 |
130,914,664 (GRCm39) |
missense |
probably damaging |
0.98 |
R9102:Siglec1
|
UTSW |
2 |
130,915,389 (GRCm39) |
missense |
probably benign |
0.01 |
R9311:Siglec1
|
UTSW |
2 |
130,916,013 (GRCm39) |
missense |
probably damaging |
1.00 |
R9416:Siglec1
|
UTSW |
2 |
130,925,390 (GRCm39) |
missense |
probably benign |
0.01 |
R9462:Siglec1
|
UTSW |
2 |
130,916,404 (GRCm39) |
missense |
probably damaging |
1.00 |
R9521:Siglec1
|
UTSW |
2 |
130,915,246 (GRCm39) |
critical splice donor site |
probably null |
|
R9683:Siglec1
|
UTSW |
2 |
130,921,236 (GRCm39) |
missense |
probably damaging |
0.99 |
R9799:Siglec1
|
UTSW |
2 |
130,915,941 (GRCm39) |
missense |
probably damaging |
0.99 |
X0024:Siglec1
|
UTSW |
2 |
130,922,411 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1176:Siglec1
|
UTSW |
2 |
130,922,444 (GRCm39) |
missense |
possibly damaging |
0.83 |
Z1176:Siglec1
|
UTSW |
2 |
130,920,665 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Predicted Primers |
PCR Primer
(F):5'- AGTGGCCAGTAACCAAGACC -3'
(R):5'- CAAGGCTAAATCCTCCTTATCTACC -3'
Sequencing Primer
(F):5'- CAACTCACAGAACACAGTGAGG -3'
(R):5'- TCCAACAGGCTTGCGAAG -3'
|
Posted On |
2014-09-17 |