Mutagenetix > Incidental Mutation

Incidental Mutation 'R2076:Hivep1'

229175

Institutional Source

Beutler Lab

Gene Symbol

Hivep1

Ensembl Gene

ENSMUSG00000021366

Gene Name

human immunodeficiency virus type I enhancer binding protein 1

Synonyms

Cryabp1, alphaA-CRYBP1

MMRRC Submission

040081-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.478) question?

Stock #

R2076 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

42052021-42192537 bp(+) (GRCm38)

Type of Mutation

critical splice donor site (1 bp from exon)

DNA Base Change (assembly)

G to A at 42164393 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Gene Model

predicted gene model for transcript(s): [ENSMUST00000060148] [ENSMUST00000060148]

AlphaFold

no structure available at present

Predicted Effect

probably null
Transcript: ENSMUST00000060148

SMART Domains

Protein: ENSMUSP00000056147
Gene: ENSMUSG00000021366

Domain	Start	End	E-Value	Type
coiled coil region	10	36	N/A	INTRINSIC
low complexity region	177	194	N/A	INTRINSIC
low complexity region	355	371	N/A	INTRINSIC
low complexity region	376	388	N/A	INTRINSIC
ZnF_C2H2	407	429	4.79e-3	SMART
ZnF_C2H2	435	457	1.95e-3	SMART
low complexity region	488	504	N/A	INTRINSIC
low complexity region	595	609	N/A	INTRINSIC
low complexity region	844	854	N/A	INTRINSIC
ZnF_C2H2	953	980	1.53e2	SMART
low complexity region	1253	1271	N/A	INTRINSIC
low complexity region	1275	1307	N/A	INTRINSIC
low complexity region	1585	1608	N/A	INTRINSIC
low complexity region	1902	1912	N/A	INTRINSIC
ZnF_C2H2	2074	2096	2.24e-3	SMART
ZnF_C2H2	2102	2126	1.5e-4	SMART
low complexity region	2164	2183	N/A	INTRINSIC
low complexity region	2299	2313	N/A	INTRINSIC
low complexity region	2345	2365	N/A	INTRINSIC
low complexity region	2517	2527	N/A	INTRINSIC
low complexity region	2580	2594	N/A	INTRINSIC
low complexity region	2629	2642	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000060148

SMART Domains

Protein: ENSMUSP00000056147
Gene: ENSMUSG00000021366

Domain	Start	End	E-Value	Type
coiled coil region	10	36	N/A	INTRINSIC
low complexity region	177	194	N/A	INTRINSIC
low complexity region	355	371	N/A	INTRINSIC
low complexity region	376	388	N/A	INTRINSIC
ZnF_C2H2	407	429	4.79e-3	SMART
ZnF_C2H2	435	457	1.95e-3	SMART
low complexity region	488	504	N/A	INTRINSIC
low complexity region	595	609	N/A	INTRINSIC
low complexity region	844	854	N/A	INTRINSIC
ZnF_C2H2	953	980	1.53e2	SMART
low complexity region	1253	1271	N/A	INTRINSIC
low complexity region	1275	1307	N/A	INTRINSIC
low complexity region	1585	1608	N/A	INTRINSIC
low complexity region	1902	1912	N/A	INTRINSIC
ZnF_C2H2	2074	2096	2.24e-3	SMART
ZnF_C2H2	2102	2126	1.5e-4	SMART
low complexity region	2164	2183	N/A	INTRINSIC
low complexity region	2299	2313	N/A	INTRINSIC
low complexity region	2345	2365	N/A	INTRINSIC
low complexity region	2517	2527	N/A	INTRINSIC
low complexity region	2580	2594	N/A	INTRINSIC
low complexity region	2629	2642	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000222854

Meta Mutation Damage Score

0.9592

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.4%
20x: 95.4%

Validation Efficiency

98% (61/62)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a transcription factor belonging to the ZAS family, members of which are large proteins that contain a ZAS domain - a modular protein structure consisting of a pair of C2H2 zinc fingers with an acidic-rich region and a serine/threonine-rich sequence. These proteins bind specifically to the DNA sequence motif, GGGACTTTCC, found in the enhancer elements of several viral promoters, including human immunodeficiency virus (HIV), and to related sequences found in the enhancer elements of a number of cellular promoters. This protein binds to this sequence motif, suggesting a role in the transcriptional regulation of both viral and cellular genes. [provided by RefSeq, Oct 2011]

Allele List at MGI

Other mutations in this stock

Total: 62 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2410089E03Rik	T	A	15: 8,219,257	D1763E	possibly damaging	Het
Abca5	A	T	11: 110,287,652	V1165D	probably benign	Het
Acot11	T	C	4: 106,770,713	H103R	probably damaging	Het
AI481877	A	G	4: 59,082,410	V406A	possibly damaging	Het
Apba1	G	T	19: 23,893,223	E140*	probably null	Het
Bicdl1	A	T	5: 115,655,928	I253N	probably damaging	Het
Ccdc159	T	C	9: 21,929,506		probably null	Het
Ccne2	A	G	4: 11,197,177	R160G	probably damaging	Het
Cct7	A	T	6: 85,468,140	I458F	probably damaging	Het
Cd3g	T	A	9: 44,974,297	D50V	probably damaging	Het
Ces2h	T	C	8: 105,019,028	L461P	probably benign	Het
Csn2	A	G	5: 87,696,174	S19P	probably damaging	Het
Cyp3a11	A	T	5: 145,879,766	V4D	probably benign	Het
Ddx3y	A	G	Y: 1,266,593		probably null	Het
Dlgap1	C	T	17: 70,786,831	Q716*	probably null	Het
Dlx6	A	G	6: 6,867,098	S234G	probably benign	Het
Dnah7a	T	C	1: 53,503,809	T2401A	probably benign	Het
Dnah7b	T	G	1: 46,242,321	Y2847*	probably null	Het
Dpysl2	A	G	14: 66,865,122	S30P	probably damaging	Het
Ezh2	A	T	6: 47,576,633	L50*	probably null	Het
Fam135b	T	A	15: 71,478,243	E349D	probably damaging	Het
Fam69c	G	T	18: 84,736,908	D170Y	probably damaging	Het
Frat2	T	C	19: 41,847,803	T37A	probably benign	Het
Gm5294	A	G	5: 138,821,267	D100G	probably benign	Het
Hspb11	T	C	4: 107,279,767	S121P	possibly damaging	Het
Ikbkap	T	C	4: 56,786,620	D441G	probably damaging	Het
Impdh1	G	A	6: 29,205,163	A213V	probably damaging	Het
Irf2	G	T	8: 46,845,927	W252L	probably damaging	Het
Irx4	A	G	13: 73,268,265	D260G	probably damaging	Het
Kalrn	T	A	16: 34,332,143	H338L	probably benign	Het
Kif9	T	A	9: 110,485,032		probably null	Het
Klhl24	T	C	16: 20,117,878	V412A	probably damaging	Het
Lgals8	T	A	13: 12,454,869	K70*	probably null	Het
Mkl2	T	C	16: 13,401,382	S631P	probably benign	Het
Myo1e	T	A	9: 70,383,877	N983K	probably benign	Het
Nipbl	T	C	15: 8,311,207	R2010G	probably benign	Het
Npw	A	T	17: 24,657,439	V166D	possibly damaging	Het
Osbpl5	T	C	7: 143,709,144	Y169C	probably damaging	Het
Pcdh15	T	C	10: 74,342,647	Y579H	probably damaging	Het
Pde8a	A	G	7: 81,308,945	T330A	probably benign	Het
Plxnb2	C	T	15: 89,158,026	V1592M	probably damaging	Het
Ppp2r3a	A	C	9: 101,144,371	M955R	possibly damaging	Het
Ptprk	T	A	10: 28,589,368	I1349K	probably damaging	Het
Rad52	C	T	6: 119,911,079	H9Y	probably benign	Het
Rapgef1	A	G	2: 29,702,508	Q466R	probably benign	Het
Rb1cc1	T	A	1: 6,250,038	I1227N	possibly damaging	Het
Rhbdf1	T	C	11: 32,214,088	M273V	probably benign	Het
Slc30a3	G	T	5: 31,086,821	Y323*	probably null	Het
Slc5a9	T	C	4: 111,885,573	I441V	possibly damaging	Het
Spast	G	C	17: 74,352,031	G131A	probably damaging	Het
Syne1	C	G	10: 5,040,897	W8444S	probably damaging	Het
Tgm4	G	T	9: 123,051,095	A211S	probably benign	Het
Themis2	T	C	4: 132,785,802	D371G	probably damaging	Het
Tmem132e	T	A	11: 82,435,068	I206N	possibly damaging	Het
Uba3	G	T	6: 97,199,280	D88E	probably damaging	Het
Vmn1r230	T	A	17: 20,846,882	M111K	probably damaging	Het
Wdr35	C	T	12: 9,024,281	H971Y	possibly damaging	Het
Yeats2	C	A	16: 20,186,282	H356Q	possibly damaging	Het
Zfp180	A	G	7: 24,105,103	K316E	probably damaging	Het
Zfp518a	T	C	19: 40,914,327	L900P	probably damaging	Het
Zfp655	A	G	5: 145,244,600	N423D	possibly damaging	Het
Zfp932	A	G	5: 110,009,468	Q344R	probably benign	Het

Other mutations in Hivep1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00530:Hivep1	APN	13	42154649	missense	probably benign	0.00
IGL00572:Hivep1	APN	13	42158871	missense	probably benign	0.00
IGL00820:Hivep1	APN	13	42183818	missense	probably benign	0.29
IGL00846:Hivep1	APN	13	42167616	nonsense	probably null
IGL01068:Hivep1	APN	13	42159984	missense	probably benign	0.00
IGL01431:Hivep1	APN	13	42158017	missense	probably damaging	0.96
IGL01664:Hivep1	APN	13	42159279	missense	probably benign	0.18
IGL01833:Hivep1	APN	13	42154988	nonsense	probably null
IGL02037:Hivep1	APN	13	42156077	missense	probably benign	0.00
IGL02375:Hivep1	APN	13	42156449	missense	probably benign	0.30
IGL02414:Hivep1	APN	13	42154909	missense	probably damaging	0.99
IGL02609:Hivep1	APN	13	42155654	missense	probably damaging	0.98
IGL02649:Hivep1	APN	13	42157311	missense	possibly damaging	0.69
IGL02654:Hivep1	APN	13	42157685	missense	probably damaging	0.97
IGL02977:Hivep1	APN	13	42155936	missense	possibly damaging	0.94
IGL03124:Hivep1	APN	13	42158904	missense	possibly damaging	0.66
IGL03050:Hivep1	UTSW	13	42156128	missense	probably benign	0.12
PIT4305001:Hivep1	UTSW	13	42181671	missense
R0067:Hivep1	UTSW	13	42158656	missense	probably benign	0.00
R0067:Hivep1	UTSW	13	42158656	missense	probably benign	0.00
R0078:Hivep1	UTSW	13	42156041	missense	probably damaging	1.00
R0194:Hivep1	UTSW	13	42155435	missense	probably damaging	1.00
R0195:Hivep1	UTSW	13	42156153	missense	probably benign
R0245:Hivep1	UTSW	13	42164290	missense	possibly damaging	0.93
R0348:Hivep1	UTSW	13	42158379	missense	possibly damaging	0.65
R0654:Hivep1	UTSW	13	42159756	missense	probably benign	0.16
R0655:Hivep1	UTSW	13	42167585	missense	probably damaging	1.00
R0717:Hivep1	UTSW	13	42154946	missense	possibly damaging	0.46
R1013:Hivep1	UTSW	13	42156962	missense	probably damaging	1.00
R1216:Hivep1	UTSW	13	42157521	missense	probably benign	0.03
R1256:Hivep1	UTSW	13	42181831	missense	probably damaging	1.00
R1435:Hivep1	UTSW	13	42158043	missense	probably damaging	1.00
R1437:Hivep1	UTSW	13	42157140	missense	probably benign	0.03
R1438:Hivep1	UTSW	13	42158120	missense	probably benign	0.00
R1672:Hivep1	UTSW	13	42160284	missense	probably damaging	0.96
R1733:Hivep1	UTSW	13	42157931	missense	probably damaging	1.00
R1762:Hivep1	UTSW	13	42183786	missense	possibly damaging	0.80
R1786:Hivep1	UTSW	13	42183786	missense	possibly damaging	0.80
R1909:Hivep1	UTSW	13	42155646	missense	probably benign	0.38
R1993:Hivep1	UTSW	13	42157493	missense	probably benign	0.00
R2004:Hivep1	UTSW	13	42160149	missense	possibly damaging	0.47
R2061:Hivep1	UTSW	13	42160124	missense	possibly damaging	0.80
R2069:Hivep1	UTSW	13	42183786	missense	possibly damaging	0.80
R2075:Hivep1	UTSW	13	42156318	missense	probably damaging	0.98
R2085:Hivep1	UTSW	13	42183750	missense	probably benign	0.34
R3701:Hivep1	UTSW	13	42157727	missense	probably benign	0.03
R3702:Hivep1	UTSW	13	42157727	missense	probably benign	0.03
R3716:Hivep1	UTSW	13	42158495	missense	probably damaging	1.00
R3718:Hivep1	UTSW	13	42158495	missense	probably damaging	1.00
R3719:Hivep1	UTSW	13	42157727	missense	probably benign	0.03
R3720:Hivep1	UTSW	13	42158601	missense	probably benign	0.01
R3820:Hivep1	UTSW	13	42184311	missense	possibly damaging	0.46
R3822:Hivep1	UTSW	13	42184311	missense	possibly damaging	0.46
R3842:Hivep1	UTSW	13	42157727	missense	probably benign	0.03
R4379:Hivep1	UTSW	13	42155430	missense	probably damaging	1.00
R4525:Hivep1	UTSW	13	42155813	missense	probably benign
R4587:Hivep1	UTSW	13	42156228	missense	probably benign	0.00
R4604:Hivep1	UTSW	13	42159749	missense	probably benign	0.08
R4686:Hivep1	UTSW	13	42155850	missense	probably benign	0.00
R4725:Hivep1	UTSW	13	42163411	missense	probably benign	0.19
R4924:Hivep1	UTSW	13	42158316	missense	probably benign	0.20
R5009:Hivep1	UTSW	13	42158753	missense	probably benign	0.06
R5320:Hivep1	UTSW	13	42159639	missense	probably damaging	1.00
R5385:Hivep1	UTSW	13	42164395	splice site	probably null
R5498:Hivep1	UTSW	13	42123158	critical splice acceptor site	probably null
R5521:Hivep1	UTSW	13	42158328	missense	probably damaging	1.00
R5529:Hivep1	UTSW	13	42156650	missense	possibly damaging	0.81
R5584:Hivep1	UTSW	13	42160117	missense	probably benign
R5635:Hivep1	UTSW	13	42160127	missense	probably benign	0.16
R5636:Hivep1	UTSW	13	42163456	missense	possibly damaging	0.92
R5886:Hivep1	UTSW	13	42156612	missense	probably damaging	1.00
R5895:Hivep1	UTSW	13	42157218	missense	possibly damaging	0.95
R5981:Hivep1	UTSW	13	42160188	missense	probably damaging	1.00
R6012:Hivep1	UTSW	13	42184458	missense	possibly damaging	0.50
R6033:Hivep1	UTSW	13	42157107	missense	probably benign	0.20
R6033:Hivep1	UTSW	13	42157107	missense	probably benign	0.20
R6037:Hivep1	UTSW	13	42157940	missense	probably damaging	1.00
R6037:Hivep1	UTSW	13	42157940	missense	probably damaging	1.00
R6241:Hivep1	UTSW	13	42158370	missense	probably benign	0.01
R6247:Hivep1	UTSW	13	42157490	missense	probably benign
R6343:Hivep1	UTSW	13	42159671	nonsense	probably null
R6631:Hivep1	UTSW	13	42156480	missense	probably damaging	0.96
R6720:Hivep1	UTSW	13	42164284	missense	probably damaging	1.00
R6767:Hivep1	UTSW	13	42154727	missense	probably damaging	0.99
R6797:Hivep1	UTSW	13	42157081	missense	probably benign	0.00
R6800:Hivep1	UTSW	13	42157376	missense	probably damaging	1.00
R6854:Hivep1	UTSW	13	42156507	missense	probably damaging	1.00
R6919:Hivep1	UTSW	13	42183452	missense	probably benign	0.00
R6993:Hivep1	UTSW	13	42158714	missense	possibly damaging	0.94
R7104:Hivep1	UTSW	13	42157338	missense	probably benign	0.26
R7139:Hivep1	UTSW	13	42159954	missense	probably benign	0.28
R7186:Hivep1	UTSW	13	42156338	missense	probably benign	0.01
R7227:Hivep1	UTSW	13	42156911	missense	probably benign	0.02
R7263:Hivep1	UTSW	13	42158192	missense	possibly damaging	0.50
R7438:Hivep1	UTSW	13	42154911	missense	probably damaging	0.99
R7490:Hivep1	UTSW	13	42157650	missense	probably damaging	1.00
R7583:Hivep1	UTSW	13	42164240	missense	probably damaging	1.00
R7708:Hivep1	UTSW	13	42164277	nonsense	probably null
R7763:Hivep1	UTSW	13	42159461	missense	probably benign	0.12
R7840:Hivep1	UTSW	13	42155352	missense	probably benign
R7864:Hivep1	UTSW	13	42158814	missense	probably benign	0.02
R7913:Hivep1	UTSW	13	42156366	missense	probably benign	0.00
R7934:Hivep1	UTSW	13	42154698	missense	probably benign	0.17
R8017:Hivep1	UTSW	13	42167622	missense
R8019:Hivep1	UTSW	13	42167622	missense
R8312:Hivep1	UTSW	13	42155177	missense	possibly damaging	0.80
R8336:Hivep1	UTSW	13	42155929	missense	probably benign	0.00
R8415:Hivep1	UTSW	13	42155429	missense	probably benign	0.20
R8477:Hivep1	UTSW	13	42184220	missense	probably benign	0.00
R8868:Hivep1	UTSW	13	42158931	missense	possibly damaging	0.82
R9015:Hivep1	UTSW	13	42158373	missense	probably benign	0.34
R9185:Hivep1	UTSW	13	42184499	missense	possibly damaging	0.86
R9225:Hivep1	UTSW	13	42183708	missense	probably damaging	1.00
R9330:Hivep1	UTSW	13	42164237	missense	probably damaging	1.00
R9364:Hivep1	UTSW	13	42154775	missense	possibly damaging	0.63
R9377:Hivep1	UTSW	13	42181927	missense	probably benign	0.13
R9422:Hivep1	UTSW	13	42159737	missense	probably benign	0.06
R9451:Hivep1	UTSW	13	42183776	missense	probably benign	0.00
R9480:Hivep1	UTSW	13	42183582	missense	probably damaging	1.00
R9490:Hivep1	UTSW	13	42158042	missense	probably damaging	0.96
R9502:Hivep1	UTSW	13	42169303	missense
R9554:Hivep1	UTSW	13	42154775	missense	possibly damaging	0.63
X0060:Hivep1	UTSW	13	42154985	missense	probably benign	0.07
X0067:Hivep1	UTSW	13	42156717	missense	probably damaging	0.98
Z1177:Hivep1	UTSW	13	42159981	missense	possibly damaging	0.85

Predicted Primers

PCR Primer
(F):5'- GTTGCAGAAACTAGGAATCTTCTC -3'
(R):5'- AACCCTGTCATTAGAAGTACTTTCC -3'

Sequencing Primer
(F):5'- GTGCATAAAACCATTGGAGATTTGTG -3'
(R):5'- AGAAGTACTTTCCTTAAAGGGTCTAG -3'

Posted On

2014-09-17