Incidental Mutation 'R2083:Dmrtb1'
ID 230135
Institutional Source Beutler Lab
Gene Symbol Dmrtb1
Ensembl Gene ENSMUSG00000028610
Gene Name DMRT-like family B with proline-rich C-terminal, 1
Synonyms Dmrt6, Prp13
MMRRC Submission 040088-MU
Accession Numbers
Is this an essential gene? Possibly non essential (E-score: 0.365) question?
Stock # R2083 (G1)
Quality Score 225
Status Not validated
Chromosome 4
Chromosomal Location 107676290-107684230 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) C to T at 107683612 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Arginine to Glutamine at position 184 (R184Q)
Ref Sequence ENSEMBL: ENSMUSP00000064220 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000069271] [ENSMUST00000131776]
AlphaFold A2A9I7
Predicted Effect possibly damaging
Transcript: ENSMUST00000069271
AA Change: R184Q

PolyPhen 2 Score 0.517 (Sensitivity: 0.88; Specificity: 0.90)
SMART Domains Protein: ENSMUSP00000064220
Gene: ENSMUSG00000028610
AA Change: R184Q

DomainStartEndE-ValueType
Pfam:DM 3 49 1.5e-22 PFAM
low complexity region 72 82 N/A INTRINSIC
low complexity region 94 102 N/A INTRINSIC
internal_repeat_1 117 131 5.48e-5 PROSPERO
internal_repeat_1 130 143 5.48e-5 PROSPERO
low complexity region 172 190 N/A INTRINSIC
low complexity region 279 306 N/A INTRINSIC
low complexity region 316 326 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000120565
Predicted Effect noncoding transcript
Transcript: ENSMUST00000131508
Predicted Effect probably benign
Transcript: ENSMUST00000131776
SMART Domains Protein: ENSMUSP00000119617
Gene: ENSMUSG00000028610

DomainStartEndE-ValueType
low complexity region 123 150 N/A INTRINSIC
low complexity region 160 170 N/A INTRINSIC
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.4%
  • 20x: 95.4%
Validation Efficiency
MGI Phenotype PHENOTYPE: Male mice homozygous for a knock-out allele exhibit severe spermatogenesis defects, including a disruption of spermatogonial differentiation and a failure to complete meiotic prophase. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 49 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700001J03Rik T A 5: 146,184,871 M73L possibly damaging Het
AA986860 A T 1: 130,741,069 I58F probably damaging Het
Acsl3 A T 1: 78,699,811 K507N probably damaging Het
Adcy3 T C 12: 4,173,512 Y245H probably damaging Het
Adgra1 T C 7: 139,875,631 S392P probably damaging Het
Ahnak C T 19: 9,011,557 P3402S probably damaging Het
Ambra1 T A 2: 91,766,600 I12N possibly damaging Het
Atp10b A G 11: 43,212,423 T545A probably benign Het
Atxn2 G T 5: 121,784,006 A638S probably benign Het
Cd109 T C 9: 78,667,293 S520P probably damaging Het
Col6a3 T C 1: 90,782,011 D1821G unknown Het
Cyp4a10 T C 4: 115,525,308 V265A possibly damaging Het
Dnah7b A T 1: 46,241,067 I2719F possibly damaging Het
En2 T C 5: 28,167,073 S183P probably damaging Het
Etfb A G 7: 43,456,500 T101A probably benign Het
Etl4 T A 2: 20,743,549 S364T probably damaging Het
Fam196b A G 11: 34,402,141 D61G probably benign Het
Gm17728 C A 17: 9,422,289 S77Y possibly damaging Het
Golga4 A G 9: 118,532,590 E221G probably damaging Het
Gpr37 T C 6: 25,688,417 N227S possibly damaging Het
Kctd1 A T 18: 14,974,055 N784K possibly damaging Het
Klhl22 A G 16: 17,776,525 T173A probably benign Het
Ly6e T A 15: 74,958,319 C41S probably damaging Het
Mapkbp1 T C 2: 120,015,482 L444P possibly damaging Het
Mkx A T 18: 6,992,855 I143K probably damaging Het
Mlh3 A G 12: 85,269,041 F124L probably benign Het
Nlrp1a A T 11: 71,124,220 L68H possibly damaging Het
Obscn A C 11: 59,073,631 Y726* probably null Het
Olfr1312 C T 2: 112,042,553 V160I probably benign Het
Olfr26 T G 9: 38,855,341 V93G probably benign Het
Peak1 G A 9: 56,258,949 S565L probably damaging Het
Pter T A 2: 12,978,436 L84Q probably damaging Het
Ptpn4 A G 1: 119,687,759 L555P possibly damaging Het
Rpp40 A T 13: 35,898,992 M171K probably benign Het
Sacs A G 14: 61,206,506 I2000M possibly damaging Het
Scn5a T C 9: 119,492,123 I1458V probably benign Het
Slc38a4 T C 15: 97,008,993 D288G probably benign Het
Slc8a2 T G 7: 16,134,515 V224G probably damaging Het
Sptbn4 T C 7: 27,428,256 E173G probably benign Het
Tas1r1 T A 4: 152,028,391 H735L probably benign Het
Trps1 G T 15: 50,822,305 Q155K probably damaging Het
Tspyl5 T C 15: 33,686,746 H351R probably damaging Het
Ttf2 A T 3: 100,969,501 D21E probably benign Het
Ttll7 A G 3: 146,930,104 R398G possibly damaging Het
Tubgcp6 A T 15: 89,122,376 Y148N probably damaging Het
Vmn1r8 T A 6: 57,036,340 H125Q probably benign Het
Zfhx4 A G 3: 5,403,163 T2794A possibly damaging Het
Zfp27 T C 7: 29,894,783 I586V probably benign Het
Zfyve16 T C 13: 92,524,262 D13G probably damaging Het
Other mutations in Dmrtb1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01575:Dmrtb1 APN 4 107684068 missense probably benign 0.00
R1397:Dmrtb1 UTSW 4 107677039 missense probably damaging 1.00
R1579:Dmrtb1 UTSW 4 107684125 missense probably damaging 1.00
R2025:Dmrtb1 UTSW 4 107683585 missense probably damaging 0.98
R4574:Dmrtb1 UTSW 4 107677068 missense possibly damaging 0.82
R4688:Dmrtb1 UTSW 4 107684050 missense probably damaging 1.00
R4770:Dmrtb1 UTSW 4 107683789 missense probably benign 0.01
R5693:Dmrtb1 UTSW 4 107684169 unclassified probably benign
R6565:Dmrtb1 UTSW 4 107679345 missense probably damaging 0.99
R7832:Dmrtb1 UTSW 4 107683982 missense probably benign 0.19
R8115:Dmrtb1 UTSW 4 107677059 missense probably benign 0.32
R8881:Dmrtb1 UTSW 4 107680725 missense possibly damaging 0.90
R9619:Dmrtb1 UTSW 4 107683650 missense probably benign 0.23
Z1176:Dmrtb1 UTSW 4 107680830 missense probably damaging 0.99
Predicted Primers PCR Primer
(F):5'- CCCAAATCCTTGTCTGGGAAC -3'
(R):5'- AGCATTTGCCCACTGCCTAG -3'

Sequencing Primer
(F):5'- ACAGGTTCTCAAGCGGGGTTAC -3'
(R):5'- GCCACTTGCTTCCTCGAGAG -3'
Posted On 2014-09-18