Incidental Mutation 'R2134:Or52d3'
ID 233632
Institutional Source Beutler Lab
Gene Symbol Or52d3
Ensembl Gene ENSMUSG00000073926
Gene Name olfactory receptor family 52 subfamily D member 3
Synonyms GA_x6K02T2PBJ9-7206970-7207923, Olfr653, MOR33-1
MMRRC Submission 040137-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.064) question?
Stock # R2134 (G1)
Quality Score 225
Status Not validated
Chromosome 7
Chromosomal Location 104228831-104229876 bp(+) (GRCm39)
Type of Mutation start gained
DNA Base Change (assembly) T to C at 104228848 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000149192 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000098174] [ENSMUST00000215585] [ENSMUST00000217466]
AlphaFold E9PVA0
Predicted Effect probably benign
Transcript: ENSMUST00000098174
SMART Domains Protein: ENSMUSP00000095776
Gene: ENSMUSG00000073926

DomainStartEndE-ValueType
Pfam:7tm_4 37 316 2.2e-111 PFAM
Pfam:7TM_GPCR_Srsx 41 179 4.6e-10 PFAM
Pfam:7tm_1 47 298 5.9e-22 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000215585
Predicted Effect probably benign
Transcript: ENSMUST00000217466
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.6%
  • 10x: 97.3%
  • 20x: 94.9%
Validation Efficiency
MGI Phenotype FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 64 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca8a A T 11: 109,921,743 (GRCm39) V1437E probably null Het
Adam12 G A 7: 133,614,017 (GRCm39) R80* probably null Het
Adgrb3 G T 1: 25,133,038 (GRCm39) F479L probably damaging Het
Atf7ip T A 6: 136,582,485 (GRCm39) V1165E possibly damaging Het
Atm C T 9: 53,379,264 (GRCm39) probably null Het
Atp11c A G X: 59,322,143 (GRCm39) Y593H probably damaging Het
Btnl1 A G 17: 34,604,608 (GRCm39) D463G possibly damaging Het
Cdc34b T G 11: 94,633,252 (GRCm39) W151G probably damaging Het
Cdkal1 A G 13: 29,538,660 (GRCm39) S500P possibly damaging Het
Cenpf T C 1: 189,390,839 (GRCm39) N998D probably benign Het
Ces2e T A 8: 105,659,171 (GRCm39) probably null Het
Chd7 A G 4: 8,753,147 (GRCm39) Q548R probably damaging Het
Chfr T A 5: 110,292,627 (GRCm39) probably null Het
Clu A G 14: 66,212,290 (GRCm39) probably null Het
Cntnap5c A G 17: 58,714,717 (GRCm39) D1235G probably damaging Het
Col6a4 T C 9: 105,943,860 (GRCm39) S1205G probably benign Het
Ddx47 G T 6: 134,992,313 (GRCm39) E113* probably null Het
Dock4 A G 12: 40,795,667 (GRCm39) Y828C probably benign Het
Dync1h1 T A 12: 110,623,065 (GRCm39) N3553K possibly damaging Het
Egflam C T 15: 7,263,760 (GRCm39) C730Y probably damaging Het
Fam83b T C 9: 76,398,298 (GRCm39) Y935C probably damaging Het
Fam83g A G 11: 61,594,510 (GRCm39) I681M probably benign Het
Fastk T C 5: 24,650,139 (GRCm39) R3G probably damaging Het
Fxr1 A T 3: 34,112,196 (GRCm39) E367D probably damaging Het
Gatb A G 3: 85,518,677 (GRCm39) D261G probably damaging Het
Gm5617 T C 9: 48,407,117 (GRCm39) S84P possibly damaging Het
Hecw1 C T 13: 14,552,285 (GRCm39) E104K probably damaging Het
Il31ra T C 13: 112,680,422 (GRCm39) K265R possibly damaging Het
Khsrp GTCATT GT 17: 57,331,410 (GRCm39) probably null Het
Lrp2 T A 2: 69,341,411 (GRCm39) D923V probably damaging Het
Ltn1 A G 16: 87,179,601 (GRCm39) L1520P probably damaging Het
Magel2 G A 7: 62,028,844 (GRCm39) V583I unknown Het
Map1s T G 8: 71,366,526 (GRCm39) V477G probably benign Het
Mical1 T C 10: 41,358,708 (GRCm39) L542P probably damaging Het
Mtcl3 T A 10: 29,072,395 (GRCm39) Y562* probably null Het
Mycbp2 T C 14: 103,446,329 (GRCm39) Y1800C probably damaging Het
Mylk A T 16: 34,806,846 (GRCm39) D1697V probably benign Het
Nlrp1a A T 11: 71,015,014 (GRCm39) F79I probably benign Het
Pde9a A G 17: 31,605,284 (GRCm39) Y6C probably damaging Het
Plxnd1 A T 6: 115,934,509 (GRCm39) I1808N probably damaging Het
Ppp1r13b T A 12: 111,800,167 (GRCm39) T537S probably benign Het
Ppp2r2a A G 14: 67,253,924 (GRCm39) F415L possibly damaging Het
Rabgap1 C T 2: 37,453,499 (GRCm39) R976* probably null Het
Rbfox3 T C 11: 118,387,842 (GRCm39) H195R probably damaging Het
Ripk4 A T 16: 97,544,933 (GRCm39) D571E probably damaging Het
Sdhaf4 T A 1: 24,044,634 (GRCm39) R16S probably benign Het
Slc17a1 G T 13: 24,059,658 (GRCm39) G130* probably null Het
Slc6a1 G T 6: 114,278,977 (GRCm39) A23S probably benign Het
Slco1a8 T C 6: 141,926,704 (GRCm39) I541V probably damaging Het
Spock1 T A 13: 57,583,952 (GRCm39) Q321L probably damaging Het
Syne2 A G 12: 75,999,560 (GRCm39) I2318V probably damaging Het
Terf2ip T C 8: 112,738,271 (GRCm39) V53A possibly damaging Het
Thrb T C 14: 18,033,487 (GRCm38) F403L probably benign Het
Tktl2 G A 8: 66,964,999 (GRCm39) V186M probably damaging Het
Uqcrfs1 T C 13: 30,724,787 (GRCm39) K251R probably benign Het
Vmn2r111 T C 17: 22,792,085 (GRCm39) E57G possibly damaging Het
Vmn2r114 T A 17: 23,510,737 (GRCm39) Y581F probably damaging Het
Vps13d A G 4: 144,874,909 (GRCm39) V1866A probably benign Het
Washc5 A T 15: 59,241,083 (GRCm39) F84Y probably damaging Het
Yars1 T A 4: 129,090,992 (GRCm39) Y28* probably null Het
Zfp638 A G 6: 83,905,964 (GRCm39) Y43C probably damaging Het
Zfp750 T A 11: 121,404,758 (GRCm39) H39L probably damaging Het
Zfr2 C A 10: 81,078,735 (GRCm39) S322R probably damaging Het
Zzef1 A G 11: 72,771,450 (GRCm39) D1644G probably benign Het
Other mutations in Or52d3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01588:Or52d3 APN 7 104,229,150 (GRCm39) missense probably damaging 1.00
I2288:Or52d3 UTSW 7 104,229,593 (GRCm39) missense probably damaging 1.00
PIT4131001:Or52d3 UTSW 7 104,229,237 (GRCm39) missense probably damaging 0.99
R0325:Or52d3 UTSW 7 104,229,567 (GRCm39) missense probably damaging 1.00
R1579:Or52d3 UTSW 7 104,229,268 (GRCm39) nonsense probably null
R1599:Or52d3 UTSW 7 104,228,855 (GRCm39) start codon destroyed probably null
R1956:Or52d3 UTSW 7 104,229,116 (GRCm39) missense probably damaging 1.00
R2418:Or52d3 UTSW 7 104,229,141 (GRCm39) missense probably benign 0.00
R2483:Or52d3 UTSW 7 104,229,149 (GRCm39) missense probably damaging 1.00
R3623:Or52d3 UTSW 7 104,229,149 (GRCm39) missense probably damaging 1.00
R4049:Or52d3 UTSW 7 104,229,575 (GRCm39) missense probably benign
R4755:Or52d3 UTSW 7 104,229,268 (GRCm39) nonsense probably null
R4757:Or52d3 UTSW 7 104,229,404 (GRCm39) missense possibly damaging 0.95
R4828:Or52d3 UTSW 7 104,229,180 (GRCm39) missense possibly damaging 0.62
R4842:Or52d3 UTSW 7 104,229,422 (GRCm39) missense probably benign 0.45
R5496:Or52d3 UTSW 7 104,229,701 (GRCm39) missense probably damaging 1.00
R6830:Or52d3 UTSW 7 104,229,447 (GRCm39) missense probably damaging 1.00
R7320:Or52d3 UTSW 7 104,229,645 (GRCm39) nonsense probably null
R7590:Or52d3 UTSW 7 104,229,149 (GRCm39) missense probably damaging 1.00
R7968:Or52d3 UTSW 7 104,229,595 (GRCm39) nonsense probably null
R8491:Or52d3 UTSW 7 104,229,242 (GRCm39) missense probably damaging 0.99
R9306:Or52d3 UTSW 7 104,229,128 (GRCm39) missense probably damaging 1.00
R9521:Or52d3 UTSW 7 104,228,855 (GRCm39) start codon destroyed probably null
R9557:Or52d3 UTSW 7 104,229,768 (GRCm39) missense probably damaging 1.00
R9682:Or52d3 UTSW 7 104,229,434 (GRCm39) missense probably damaging 1.00
RF020:Or52d3 UTSW 7 104,229,497 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- GCTGCCTGAAAGATGTTTGAAG -3'
(R):5'- GAGGTACATTGGCTCATGGAG -3'

Sequencing Primer
(F):5'- GCCTGAAAGATGTTTGAAGAATTTG -3'
(R):5'- CATGGAGAGCCCTGTCTGTTATAATG -3'
Posted On 2014-10-01