Mutagenetix > Incidental Mutations

Incidental Mutation 'R0196:Olfr1352'

23448

Institutional Source

Beutler Lab

Gene Symbol

Olfr1352

Ensembl Gene

ENSMUSG00000046493

Gene Name

olfactory receptor 1352

Synonyms

MOR139-1, GA_x6K02T2QGN0-2828447-2827518

MMRRC Submission

038455-MU

Accession Numbers

Is this an essential gene?

Probably non essential (E-score: 0.082) question?

Stock #

R0196 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

78981050-78987903 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

C to T at 78984189 bp

Zygosity

Heterozygous

Amino Acid Change

Threonine to Isoleucine at position 133 (T133I)

Ref Sequence

ENSEMBL: ENSMUSP00000054355 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000058991] [ENSMUST00000203973]

Predicted Effect

possibly damaging
Transcript: ENSMUST00000058991
AA Change: T133I

PolyPhen 2 Score 0.888 (Sensitivity: 0.82; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000054355
Gene: ENSMUSG00000046493
AA Change: T133I

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	308	4.7e-52	PFAM
Pfam:7TM_GPCR_Srsx	35	305	9.1e-6	PFAM
Pfam:7tm_1	41	290	4.7e-28	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000203973
AA Change: T100I

PolyPhen 2 Score 0.672 (Sensitivity: 0.86; Specificity: 0.91)

SMART Domains

Protein: ENSMUSP00000144895
Gene: ENSMUSG00000046493
AA Change: T100I

Domain	Start	End	E-Value	Type
Pfam:7tm_4	1	122	6.1e-25	PFAM
Pfam:7TM_GPCR_Srx	1	123	7.5e-5	PFAM
Pfam:7TM_GPCR_Srsx	2	123	4.5e-8	PFAM
Pfam:7tm_1	8	123	2.1e-23	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000219714

Meta Mutation Damage Score

0.1795

Coding Region Coverage

1x: 98.8%
3x: 97.7%
10x: 93.8%
20x: 81.8%

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 76 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4933409G03Rik	A	G	2: 68,616,247		probably benign	Het
Aass	G	A	6: 23,109,520	P317L	probably damaging	Het
Abca12	T	A	1: 71,259,813	N2313I	possibly damaging	Het
Adamts12	T	C	15: 11,071,508	I46T	probably benign	Het
Adipoq	T	G	16: 23,146,643		probably null	Het
Amy1	A	T	3: 113,569,421	D92E	probably benign	Het
Asb15	G	A	6: 24,564,393	R282Q	probably damaging	Het
Bag6	G	C	17: 35,144,263	G693A	probably damaging	Het
Birc6	T	C	17: 74,580,287	I870T	possibly damaging	Het
Cand2	A	G	6: 115,789,502	K356R	probably damaging	Het
Cbfa2t3	T	C	8: 122,633,337	Q525R	possibly damaging	Het
Ccdc94	C	A	17: 55,964,653	D191E	probably damaging	Het
Cd4	T	C	6: 124,867,806	R339G	probably damaging	Het
Cdh8	A	G	8: 99,190,434	S350P	probably damaging	Het
Cep295	A	T	9: 15,338,213	S469T	probably damaging	Het
Ckap2l	A	T	2: 129,285,422	S279T	probably benign	Het
Clnk	T	A	5: 38,769,939	N66Y	probably damaging	Het
Col27a1	A	T	4: 63,224,266	T64S	probably benign	Het
Crtc1	T	C	8: 70,386,221	D599G	probably damaging	Het
Cyp2c23	A	C	19: 44,012,356	I363S	probably damaging	Het
Dnah10	A	T	5: 124,834,075	I4519F	possibly damaging	Het
Dner	T	A	1: 84,370,832	I716F	probably damaging	Het
Dsel	T	G	1: 111,861,603	T401P	possibly damaging	Het
Egfr	A	G	11: 16,911,746	D1175G	probably benign	Het
Ephb3	A	T	16: 21,218,054	N343I	probably damaging	Het
Fbxw10	T	A	11: 62,877,244	F974I	probably benign	Het
Gfi1b	T	C	2: 28,613,774	Y138C	probably damaging	Het
Gm11168	T	A	9: 3,005,175	L6H	probably benign	Het
Grb10	A	C	11: 11,945,583	V247G	probably damaging	Het
Gstp2	A	T	19: 4,040,514		probably null	Het
Hars2	C	T	18: 36,789,204	Q291*	probably null	Het
Hyal4	G	T	6: 24,756,221	W146L	probably damaging	Het
Il22ra1	C	T	4: 135,734,245	T107I	possibly damaging	Het
Itga8	A	G	2: 12,204,729		probably null	Het
Klhl25	T	C	7: 75,865,702	S119P	probably damaging	Het
Krt81	C	A	15: 101,463,627	R24L	possibly damaging	Het
Lrrc8c	T	C	5: 105,606,770	V137A	probably benign	Het
Macrod2	A	T	2: 142,176,625	E226V	probably damaging	Het
Mcemp1	A	T	8: 3,668,201	Q165L	probably benign	Het
Mcpt9	T	A	14: 56,027,996	K82M	probably benign	Het
Mpzl3	A	G	9: 45,062,160	T66A	probably damaging	Het
Msh6	G	A	17: 87,980,360	V143I	possibly damaging	Het
Mug1	G	A	6: 121,838,725		probably null	Het
Ncr1	G	T	7: 4,340,973	C153F	probably damaging	Het
Nf1	T	A	11: 79,468,769	M1411K	possibly damaging	Het
Nf1	T	A	11: 79,578,272	V786D	probably damaging	Het
Nisch	T	C	14: 31,203,394		probably benign	Het
Nwd2	T	A	5: 63,806,351	Y1093N	probably benign	Het
Oas3	G	A	5: 120,756,145	R39C	probably damaging	Het
Olfr392	A	T	11: 73,814,905	M59K	probably damaging	Het
Oxa1l	T	C	14: 54,363,487	I139T	probably damaging	Het
P3h3	T	A	6: 124,845,272	N583Y	probably damaging	Het
Pcdh18	A	T	3: 49,756,698		probably null	Het
Pcnp	C	T	16: 56,024,533		probably benign	Het
Pdzd8	G	T	19: 59,301,131	D612E	probably benign	Het
Pi4kb	T	C	3: 94,998,950	S8P	probably damaging	Het
Pikfyve	T	G	1: 65,256,072	V1454G	possibly damaging	Het
Podn	T	C	4: 108,021,498	N246D	probably damaging	Het
Prg4	T	C	1: 150,454,492		probably benign	Het
R3hdm2	T	C	10: 127,484,521	Y523H	probably damaging	Het
Rpf1	T	A	3: 146,508,149	E231V	possibly damaging	Het
Slc16a10	C	T	10: 40,056,615	E317K	probably benign	Het
Slc34a1	A	T	13: 55,412,265	I435F	probably damaging	Het
Snx19	A	G	9: 30,433,387	D629G	probably damaging	Het
Tomm70a	T	C	16: 57,146,100	I472T	probably benign	Het
Trp53	A	G	11: 69,588,680	Y202C	probably damaging	Het
Ttc14	T	A	3: 33,809,254		probably benign	Het
Ugt1a1	C	T	1: 88,212,555	A185V	possibly damaging	Het
Usp28	A	G	9: 49,028,278	D655G	probably damaging	Het
Vmn1r215	C	T	13: 23,076,084	T98I	probably damaging	Het
Vmn2r121	G	T	X: 124,132,182	T426N	probably benign	Het
Vmn2r99	A	G	17: 19,394,573	N852D	probably benign	Het
Xrn2	T	A	2: 147,047,660	D654E	probably damaging	Het
Zfp335	C	G	2: 164,896,145	A849P	possibly damaging	Het
Zfp954	C	T	7: 7,115,391	V385M	probably damaging	Het
Zmynd15	A	G	11: 70,464,226	T350A	probably damaging	Het

Other mutations in Olfr1352

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01468:Olfr1352	APN	10	78983862	missense	probably damaging	0.96
IGL01865:Olfr1352	APN	10	78984678	missense	possibly damaging	0.94
R0362:Olfr1352	UTSW	10	78984386	missense	probably benign	0.00
R1574:Olfr1352	UTSW	10	78983986	missense	probably damaging	1.00
R1574:Olfr1352	UTSW	10	78983986	missense	probably damaging	1.00
R2982:Olfr1352	UTSW	10	78984440	missense	probably damaging	1.00
R4724:Olfr1352	UTSW	10	78984522	missense	probably damaging	1.00
R5000:Olfr1352	UTSW	10	78984680	missense	probably benign	0.00
R5085:Olfr1352	UTSW	10	78984094	missense	probably benign	0.03
R5145:Olfr1352	UTSW	10	78984309	missense	probably benign	0.35
R5455:Olfr1352	UTSW	10	78984537	missense	possibly damaging	0.59
R5777:Olfr1352	UTSW	10	78984678	missense	possibly damaging	0.78
R5822:Olfr1352	UTSW	10	78984189	missense	possibly damaging	0.89
R6283:Olfr1352	UTSW	10	78984279	missense	probably benign	0.01
R7242:Olfr1352	UTSW	10	78984497	nonsense	probably null
R7504:Olfr1352	UTSW	10	78984660	missense	possibly damaging	0.78
R8198:Olfr1352	UTSW	10	78984609	missense	probably benign	0.03
R8268:Olfr1352	UTSW	10	78983997	missense	probably damaging	0.98

Predicted Primers

PCR Primer
(F):5'- TCTCAGATGCCAACTTGCATACACC -3'
(R):5'- GCTGTGCCACCTGATTCAATTCAC -3'

Sequencing Primer
(F):5'- GATATCTGCTTTGTTTCCACCACTG -3'
(R):5'- CCTGATTCAATTCACAGAAGAAGTG -3'

Posted On

2013-04-16