Mutagenetix > Incidental Mutation

Incidental Mutation 'R0196:Adamts12'

23463

Institutional Source

Beutler Lab

Gene Symbol

Adamts12

Ensembl Gene

ENSMUSG00000047497

Gene Name

a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12

Synonyms

AI605170; ADAMTS-12

MMRRC Submission

038455-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.072) question?

Stock #

R0196 (G1)

Quality Score

192

Status

Not validated

Chromosome

Chromosomal Location

11064790-11349231 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 11071508 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Threonine at position 46 (I46T)

Ref Sequence

ENSEMBL: ENSMUSP00000057796 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000061318]

AlphaFold

Q811B3

Predicted Effect

probably benign
Transcript: ENSMUST00000061318
AA Change: I46T

PolyPhen 2 Score 0.109 (Sensitivity: 0.93; Specificity: 0.86)

SMART Domains

Protein: ENSMUSP00000057796
Gene: ENSMUSG00000047497
AA Change: I46T

Domain	Start	End	E-Value	Type
signal peptide	1	27	N/A	INTRINSIC
Pfam:Pep_M12B_propep	53	197	5.5e-30	PFAM
low complexity region	236	245	N/A	INTRINSIC
Pfam:Reprolysin_5	248	438	1.6e-14	PFAM
Pfam:Reprolysin_4	248	453	6.7e-8	PFAM
Pfam:Reprolysin	250	460	1.2e-27	PFAM
Pfam:Reprolysin_2	268	450	5.5e-11	PFAM
Pfam:Reprolysin_3	272	407	3.5e-10	PFAM
TSP1	549	601	9.29e-14	SMART
Pfam:ADAM_spacer1	706	817	4.8e-36	PFAM
TSP1	831	887	4.66e-5	SMART
TSP1	890	949	2.54e-1	SMART
TSP1	951	1001	8.95e-7	SMART
low complexity region	1032	1047	N/A	INTRINSIC
low complexity region	1130	1141	N/A	INTRINSIC
TSP1	1321	1371	2.22e-2	SMART
TSP1	1372	1431	9.97e-2	SMART
TSP1	1432	1479	1.19e-2	SMART
TSP1	1480	1538	2.63e-4	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000227189

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000228940

Coding Region Coverage

1x: 98.8%
3x: 97.7%
10x: 93.8%
20x: 81.8%

Validation Efficiency

MGI Phenotype

FUNCTION: This gene encodes a member of "a disintegrin and metalloproteinase with thrombospondin motifs" (ADAMTS) family of multi-domain matrix-associated metalloendopeptidases that have diverse roles in tissue morphogenesis and pathophysiological remodeling, in inflammation and in vascular biology. The encoded preproprotein undergoes proteolytic processing to generate an active protease. Mice lacking the encoded protein exhibit increased angiogenic response and tumor invasion in different models of angiogenesis and, severe inflammation and delayed recovery when subjected to experimental conditions that induce colitis, endotoxic sepsis and pancreatitis. [provided by RefSeq, Jul 2016]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit increased tumor vascularization, tumor invasion, and angiogenesis. [provided by MGI curators]

Allele List at MGI

All alleles(1) : Targeted, knock-out(1)

Other mutations in this stock

Total: 76 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4933409G03Rik	A	G	2: 68,616,247 (GRCm38)		probably benign	Het
Aass	G	A	6: 23,109,520 (GRCm38)	P317L	probably damaging	Het
Abca12	T	A	1: 71,259,813 (GRCm38)	N2313I	possibly damaging	Het
Adipoq	T	G	16: 23,146,643 (GRCm38)		probably null	Het
Amy1	A	T	3: 113,569,421 (GRCm38)	D92E	probably benign	Het
Asb15	G	A	6: 24,564,393 (GRCm38)	R282Q	probably damaging	Het
Bag6	G	C	17: 35,144,263 (GRCm38)	G693A	probably damaging	Het
Birc6	T	C	17: 74,580,287 (GRCm38)	I870T	possibly damaging	Het
Cand2	A	G	6: 115,789,502 (GRCm38)	K356R	probably damaging	Het
Cbfa2t3	T	C	8: 122,633,337 (GRCm38)	Q525R	possibly damaging	Het
Cd4	T	C	6: 124,867,806 (GRCm38)	R339G	probably damaging	Het
Cdh8	A	G	8: 99,190,434 (GRCm38)	S350P	probably damaging	Het
Cep295	A	T	9: 15,338,213 (GRCm38)	S469T	probably damaging	Het
Ckap2l	A	T	2: 129,285,422 (GRCm38)	S279T	probably benign	Het
Clnk	T	A	5: 38,769,939 (GRCm38)	N66Y	probably damaging	Het
Col27a1	A	T	4: 63,224,266 (GRCm38)	T64S	probably benign	Het
Crtc1	T	C	8: 70,386,221 (GRCm38)	D599G	probably damaging	Het
Cyp2c23	A	C	19: 44,012,356 (GRCm38)	I363S	probably damaging	Het
Dnah10	A	T	5: 124,834,075 (GRCm38)	I4519F	possibly damaging	Het
Dner	T	A	1: 84,370,832 (GRCm38)	I716F	probably damaging	Het
Dsel	T	G	1: 111,861,603 (GRCm38)	T401P	possibly damaging	Het
Egfr	A	G	11: 16,911,746 (GRCm38)	D1175G	probably benign	Het
Ephb3	A	T	16: 21,218,054 (GRCm38)	N343I	probably damaging	Het
Fbxw10	T	A	11: 62,877,244 (GRCm38)	F974I	probably benign	Het
Gfi1b	T	C	2: 28,613,774 (GRCm38)	Y138C	probably damaging	Het
Gm11168	T	A	9: 3,005,175 (GRCm38)	L6H	probably benign	Het
Grb10	A	C	11: 11,945,583 (GRCm38)	V247G	probably damaging	Het
Gstp2	A	T	19: 4,040,514 (GRCm38)		probably null	Het
Hars2	C	T	18: 36,789,204 (GRCm38)	Q291*	probably null	Het
Hyal4	G	T	6: 24,756,221 (GRCm38)	W146L	probably damaging	Het
Il22ra1	C	T	4: 135,734,245 (GRCm38)	T107I	possibly damaging	Het
Itga8	A	G	2: 12,204,729 (GRCm38)		probably null	Het
Klhl25	T	C	7: 75,865,702 (GRCm38)	S119P	probably damaging	Het
Krt81	C	A	15: 101,463,627 (GRCm38)	R24L	possibly damaging	Het
Lrrc8c	T	C	5: 105,606,770 (GRCm38)	V137A	probably benign	Het
Macrod2	A	T	2: 142,176,625 (GRCm38)	E226V	probably damaging	Het
Mcemp1	A	T	8: 3,668,201 (GRCm38)	Q165L	probably benign	Het
Mcpt9	T	A	14: 56,027,996 (GRCm38)	K82M	probably benign	Het
Mpzl3	A	G	9: 45,062,160 (GRCm38)	T66A	probably damaging	Het
Msh6	G	A	17: 87,980,360 (GRCm38)	V143I	possibly damaging	Het
Mug1	G	A	6: 121,838,725 (GRCm38)		probably null	Het
Ncr1	G	T	7: 4,340,973 (GRCm38)	C153F	probably damaging	Het
Nf1	T	A	11: 79,468,769 (GRCm38)	M1411K	possibly damaging	Het
Nf1	T	A	11: 79,578,272 (GRCm38)	V786D	probably damaging	Het
Nisch	T	C	14: 31,203,394 (GRCm38)		probably benign	Het
Nwd2	T	A	5: 63,806,351 (GRCm38)	Y1093N	probably benign	Het
Oas3	G	A	5: 120,756,145 (GRCm38)	R39C	probably damaging	Het
Or1e32	A	T	11: 73,814,905 (GRCm38)	M59K	probably damaging	Het
Or7a36	C	T	10: 78,984,189 (GRCm38)	T133I	possibly damaging	Het
Oxa1l	T	C	14: 54,363,487 (GRCm38)	I139T	probably damaging	Het
P3h3	T	A	6: 124,845,272 (GRCm38)	N583Y	probably damaging	Het
Pcdh18	A	T	3: 49,756,698 (GRCm38)		probably null	Het
Pcnp	C	T	16: 56,024,533 (GRCm38)		probably benign	Het
Pdzd8	G	T	19: 59,301,131 (GRCm38)	D612E	probably benign	Het
Pi4kb	T	C	3: 94,998,950 (GRCm38)	S8P	probably damaging	Het
Pikfyve	T	G	1: 65,256,072 (GRCm38)	V1454G	possibly damaging	Het
Podn	T	C	4: 108,021,498 (GRCm38)	N246D	probably damaging	Het
Prg4	T	C	1: 150,454,492 (GRCm38)		probably benign	Het
R3hdm2	T	C	10: 127,484,521 (GRCm38)	Y523H	probably damaging	Het
Rpf1	T	A	3: 146,508,149 (GRCm38)	E231V	possibly damaging	Het
Slc16a10	C	T	10: 40,056,615 (GRCm38)	E317K	probably benign	Het
Slc34a1	A	T	13: 55,412,265 (GRCm38)	I435F	probably damaging	Het
Snx19	A	G	9: 30,433,387 (GRCm38)	D629G	probably damaging	Het
Tomm70a	T	C	16: 57,146,100 (GRCm38)	I472T	probably benign	Het
Trp53	A	G	11: 69,588,680 (GRCm38)	Y202C	probably damaging	Het
Ttc14	T	A	3: 33,809,254 (GRCm38)		probably benign	Het
Ugt1a1	C	T	1: 88,212,555 (GRCm38)	A185V	possibly damaging	Het
Usp28	A	G	9: 49,028,278 (GRCm38)	D655G	probably damaging	Het
Vmn1r215	C	T	13: 23,076,084 (GRCm38)	T98I	probably damaging	Het
Vmn2r121	G	T	X: 124,132,182 (GRCm38)	T426N	probably benign	Het
Vmn2r99	A	G	17: 19,394,573 (GRCm38)	N852D	probably benign	Het
Xrn2	T	A	2: 147,047,660 (GRCm38)	D654E	probably damaging	Het
Yju2	C	A	17: 55,964,653 (GRCm38)	D191E	probably damaging	Het
Zfp335	C	G	2: 164,896,145 (GRCm38)	A849P	possibly damaging	Het
Zfp954	C	T	7: 7,115,391 (GRCm38)	V385M	probably damaging	Het
Zmynd15	A	G	11: 70,464,226 (GRCm38)	T350A	probably damaging	Het

Other mutations in Adamts12

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00229:Adamts12	APN	15	11,311,599 (GRCm38)	missense	probably benign	0.00
IGL00513:Adamts12	APN	15	11,256,961 (GRCm38)	missense	probably benign	0.28
IGL00579:Adamts12	APN	15	11,152,014 (GRCm38)	missense	probably benign	0.20
IGL00984:Adamts12	APN	15	11,215,610 (GRCm38)	missense	probably benign	0.01
IGL01307:Adamts12	APN	15	11,237,546 (GRCm38)	missense	possibly damaging	0.88
IGL01314:Adamts12	APN	15	11,071,853 (GRCm38)	missense	probably benign	0.30
IGL01353:Adamts12	APN	15	11,292,005 (GRCm38)	splice site	probably benign
IGL01373:Adamts12	APN	15	11,310,730 (GRCm38)	missense	probably benign	0.00
IGL01522:Adamts12	APN	15	11,065,159 (GRCm38)	critical splice donor site	probably null
IGL01589:Adamts12	APN	15	11,311,237 (GRCm38)	missense	probably benign	0.26
IGL01715:Adamts12	APN	15	11,258,096 (GRCm38)	missense	possibly damaging	0.47
IGL01966:Adamts12	APN	15	11,258,183 (GRCm38)	missense	probably damaging	0.98
IGL01994:Adamts12	APN	15	11,345,594 (GRCm38)	missense	probably damaging	1.00
IGL02058:Adamts12	APN	15	11,215,610 (GRCm38)	missense	probably benign	0.01
IGL02216:Adamts12	APN	15	11,241,485 (GRCm38)	missense	possibly damaging	0.63
IGL02252:Adamts12	APN	15	11,311,015 (GRCm38)	missense	probably benign	0.01
IGL02336:Adamts12	APN	15	11,311,245 (GRCm38)	missense	probably benign	0.02
IGL02445:Adamts12	APN	15	11,286,712 (GRCm38)	missense	probably damaging	1.00
IGL03115:Adamts12	APN	15	11,263,336 (GRCm38)	missense	probably damaging	1.00
IGL03131:Adamts12	APN	15	11,345,564 (GRCm38)	missense	probably damaging	1.00
IGL03161:Adamts12	APN	15	11,292,082 (GRCm38)	missense	possibly damaging	0.93
IGL03403:Adamts12	APN	15	11,241,488 (GRCm38)	missense	probably damaging	1.00
I2289:Adamts12	UTSW	15	11,071,808 (GRCm38)	missense	probably benign	0.13
PIT4677001:Adamts12	UTSW	15	11,286,810 (GRCm38)	missense	probably benign	0.33
R0016:Adamts12	UTSW	15	11,217,829 (GRCm38)	missense	probably damaging	1.00
R0016:Adamts12	UTSW	15	11,217,829 (GRCm38)	missense	probably damaging	1.00
R0027:Adamts12	UTSW	15	11,285,873 (GRCm38)	missense	probably damaging	0.99
R0027:Adamts12	UTSW	15	11,285,873 (GRCm38)	missense	probably damaging	0.99
R0028:Adamts12	UTSW	15	11,215,624 (GRCm38)	missense	probably damaging	1.00
R0108:Adamts12	UTSW	15	11,311,098 (GRCm38)	missense	probably benign	0.08
R0108:Adamts12	UTSW	15	11,311,098 (GRCm38)	missense	probably benign	0.08
R0122:Adamts12	UTSW	15	11,215,624 (GRCm38)	missense	probably damaging	1.00
R0308:Adamts12	UTSW	15	11,311,560 (GRCm38)	missense	probably damaging	0.98
R0335:Adamts12	UTSW	15	11,311,058 (GRCm38)	missense	possibly damaging	0.95
R0667:Adamts12	UTSW	15	11,215,624 (GRCm38)	missense	probably damaging	1.00
R0729:Adamts12	UTSW	15	11,255,683 (GRCm38)	missense	possibly damaging	0.91
R1162:Adamts12	UTSW	15	11,277,458 (GRCm38)	critical splice donor site	probably null
R1173:Adamts12	UTSW	15	11,071,757 (GRCm38)	missense	probably benign
R1174:Adamts12	UTSW	15	11,071,757 (GRCm38)	missense	probably benign
R1319:Adamts12	UTSW	15	11,286,791 (GRCm38)	missense	probably benign	0.02
R1344:Adamts12	UTSW	15	11,286,804 (GRCm38)	missense	probably damaging	1.00
R1367:Adamts12	UTSW	15	11,256,894 (GRCm38)	splice site	probably benign
R1396:Adamts12	UTSW	15	11,311,472 (GRCm38)	missense	probably benign	0.01
R1418:Adamts12	UTSW	15	11,286,804 (GRCm38)	missense	probably damaging	1.00
R1447:Adamts12	UTSW	15	11,263,361 (GRCm38)	missense	probably benign	0.42
R1466:Adamts12	UTSW	15	11,311,359 (GRCm38)	missense	probably benign
R1466:Adamts12	UTSW	15	11,311,359 (GRCm38)	missense	probably benign
R1599:Adamts12	UTSW	15	11,071,711 (GRCm38)	missense	probably damaging	0.99
R1700:Adamts12	UTSW	15	11,152,057 (GRCm38)	missense	probably benign	0.00
R1748:Adamts12	UTSW	15	11,241,462 (GRCm38)	missense	probably damaging	0.99
R1826:Adamts12	UTSW	15	11,071,520 (GRCm38)	missense	probably benign	0.06
R1870:Adamts12	UTSW	15	11,311,154 (GRCm38)	missense	probably benign	0.06
R1871:Adamts12	UTSW	15	11,311,154 (GRCm38)	missense	probably benign	0.06
R1872:Adamts12	UTSW	15	11,217,880 (GRCm38)	nonsense	probably null
R1931:Adamts12	UTSW	15	11,270,599 (GRCm38)	missense	probably benign	0.00
R2041:Adamts12	UTSW	15	11,215,735 (GRCm38)	missense	probably damaging	1.00
R2119:Adamts12	UTSW	15	11,310,579 (GRCm38)	missense	probably damaging	1.00
R2120:Adamts12	UTSW	15	11,310,579 (GRCm38)	missense	probably damaging	1.00
R2122:Adamts12	UTSW	15	11,310,579 (GRCm38)	missense	probably damaging	1.00
R2161:Adamts12	UTSW	15	11,215,735 (GRCm38)	missense	probably damaging	0.99
R2655:Adamts12	UTSW	15	11,065,088 (GRCm38)	missense	possibly damaging	0.50
R4010:Adamts12	UTSW	15	11,286,083 (GRCm38)	missense	possibly damaging	0.69
R4208:Adamts12	UTSW	15	11,071,754 (GRCm38)	missense	probably benign
R4666:Adamts12	UTSW	15	11,311,492 (GRCm38)	missense	probably benign	0.08
R4731:Adamts12	UTSW	15	11,270,662 (GRCm38)	missense	probably damaging	1.00
R4732:Adamts12	UTSW	15	11,270,662 (GRCm38)	missense	probably damaging	1.00
R4733:Adamts12	UTSW	15	11,270,662 (GRCm38)	missense	probably damaging	1.00
R4766:Adamts12	UTSW	15	11,285,901 (GRCm38)	missense	probably benign	0.03
R4877:Adamts12	UTSW	15	11,327,701 (GRCm38)	missense	probably damaging	1.00
R4929:Adamts12	UTSW	15	11,259,022 (GRCm38)	missense	probably damaging	0.96
R5060:Adamts12	UTSW	15	11,299,968 (GRCm38)	missense	probably damaging	1.00
R5145:Adamts12	UTSW	15	11,285,876 (GRCm38)	missense	probably damaging	1.00
R5191:Adamts12	UTSW	15	11,327,757 (GRCm38)	missense	probably benign	0.18
R5492:Adamts12	UTSW	15	11,336,298 (GRCm38)	missense	probably benign	0.05
R5580:Adamts12	UTSW	15	11,152,000 (GRCm38)	missense	probably benign	0.14
R5645:Adamts12	UTSW	15	11,277,420 (GRCm38)	missense	possibly damaging	0.92
R5724:Adamts12	UTSW	15	11,286,750 (GRCm38)	missense	probably benign	0.15
R6240:Adamts12	UTSW	15	11,285,958 (GRCm38)	missense	probably benign	0.44
R6331:Adamts12	UTSW	15	11,241,433 (GRCm38)	missense	probably damaging	1.00
R6381:Adamts12	UTSW	15	11,256,994 (GRCm38)	missense	possibly damaging	0.93
R6393:Adamts12	UTSW	15	11,255,635 (GRCm38)	missense	probably damaging	0.97
R6419:Adamts12	UTSW	15	11,215,673 (GRCm38)	missense	possibly damaging	0.72
R6571:Adamts12	UTSW	15	11,065,101 (GRCm38)	missense	probably benign	0.00
R6821:Adamts12	UTSW	15	11,152,048 (GRCm38)	missense	probably benign	0.14
R6913:Adamts12	UTSW	15	11,215,692 (GRCm38)	missense	probably damaging	1.00
R6973:Adamts12	UTSW	15	11,331,780 (GRCm38)	nonsense	probably null
R7188:Adamts12	UTSW	15	11,336,325 (GRCm38)	nonsense	probably null
R7290:Adamts12	UTSW	15	11,277,366 (GRCm38)	missense	probably benign	0.08
R7307:Adamts12	UTSW	15	11,217,813 (GRCm38)	missense	probably damaging	1.00
R7376:Adamts12	UTSW	15	11,277,339 (GRCm38)	missense	possibly damaging	0.69
R7419:Adamts12	UTSW	15	11,317,279 (GRCm38)	missense	probably benign	0.00
R7484:Adamts12	UTSW	15	11,345,648 (GRCm38)	missense	probably benign	0.25
R7562:Adamts12	UTSW	15	11,270,611 (GRCm38)	missense	probably benign	0.01
R7653:Adamts12	UTSW	15	11,257,029 (GRCm38)	missense	probably benign	0.28
R7696:Adamts12	UTSW	15	11,258,138 (GRCm38)	missense	probably damaging	1.00
R7957:Adamts12	UTSW	15	11,317,212 (GRCm38)	missense	possibly damaging	0.96
R7980:Adamts12	UTSW	15	11,263,337 (GRCm38)	missense	probably damaging	1.00
R7992:Adamts12	UTSW	15	11,310,818 (GRCm38)	missense	probably benign
R8032:Adamts12	UTSW	15	11,259,103 (GRCm38)	critical splice donor site	probably null
R8109:Adamts12	UTSW	15	11,331,791 (GRCm38)	missense	probably benign	0.02
R8402:Adamts12	UTSW	15	11,263,290 (GRCm38)	missense	probably damaging	0.96
R8751:Adamts12	UTSW	15	11,215,727 (GRCm38)	missense	probably damaging	1.00
R8782:Adamts12	UTSW	15	11,237,592 (GRCm38)	missense	probably damaging	1.00
R8934:Adamts12	UTSW	15	11,299,929 (GRCm38)	missense	probably damaging	0.99
R8952:Adamts12	UTSW	15	11,285,979 (GRCm38)	missense	probably damaging	1.00
R8963:Adamts12	UTSW	15	11,317,357 (GRCm38)	critical splice donor site	probably null
R9042:Adamts12	UTSW	15	11,152,048 (GRCm38)	missense	probably benign	0.08
R9162:Adamts12	UTSW	15	11,311,635 (GRCm38)	missense	probably benign	0.29
R9190:Adamts12	UTSW	15	11,336,360 (GRCm38)	missense	probably benign	0.02
R9700:Adamts12	UTSW	15	11,311,356 (GRCm38)	missense	probably benign	0.04
R9748:Adamts12	UTSW	15	11,310,542 (GRCm38)	missense	probably damaging	0.99
V1662:Adamts12	UTSW	15	11,071,808 (GRCm38)	missense	probably benign	0.13
X0022:Adamts12	UTSW	15	11,277,448 (GRCm38)	missense	probably benign	0.30
Z1176:Adamts12	UTSW	15	11,336,383 (GRCm38)	missense	not run
Z1177:Adamts12	UTSW	15	11,336,383 (GRCm38)	missense	not run
Z1177:Adamts12	UTSW	15	11,317,324 (GRCm38)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- AGCCAGGCACATGTTAGATGCTC -3'
(R):5'- TCCACGACATAGCCGTTGGAAAG -3'

Sequencing Primer
(F):5'- CACATGTTAGATGCTCAGAGAGTTTC -3'
(R):5'- TAGCCGTTGGAAAGAAATTCCC -3'

Posted On

2013-04-16